RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 ACYP2P14621 99 aa2.95□□□□□ -1.94
NEK3-201ENST00000550331 SPTSSBQ8NFR3 76 aa2.95□□□□□ -1.94
NEK3-201ENST00000550331 SCGB1A1P11684 91 aa2.94□□□□□ -1.94
NEK3-201ENST00000550331 PMAIP1Q13794 54 aa2.94□□□□□ -1.94
NEK3-201ENST00000550331 J3QR89 54 aa2.91□□□□□ -1.94
NEK3-201ENST00000550331 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
NEK3-201ENST00000550331 CHKB-CPT1BH3BT56 60 aa2.89□□□□□ -1.95
NEK3-201ENST00000550331 SMIM20Q8N5G0 67 aa2.88□□□□□ -1.95
NEK3-201ENST00000550331 LCE3CQ5T5A8 94 aa2.87□□□□□ -1.95
NEK3-201ENST00000550331 KRTAP19-7Q3SYF9 63 aa2.86□□□□□ -1.95
NEK3-201ENST00000550331 KRTAP19-3Q7Z4W3 81 aa2.86□□□□□ -1.95
NEK3-201ENST00000550331 MT1EP04732 61 aa2.85□□□□□ -1.95
NEK3-201ENST00000550331 K7ERU9 68 aa2.84□□□□□ -1.95
NEK3-201ENST00000550331 MT4P47944 62 aa2.84□□□□□ -1.95
NEK3-201ENST00000550331 KRTAP13-4Q3LI77 160 aa2.84□□□□□ -1.95
NEK3-201ENST00000550331 LUZP6Q538Z0 58 aa2.84□□□□□ -1.95
NEK3-201ENST00000550331 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
NEK3-201ENST00000550331 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
NEK3-201ENST00000550331 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
NEK3-201ENST00000550331 SPANXA2-OT1Q8N9U9 137 aa2.8□□□□□ -1.96
NEK3-201ENST00000550331 K7ERS5 55 aa2.79□□□□□ -1.96
NEK3-201ENST00000550331 CYSTM1Q9H1C7 97 aa2.79□□□□□ -1.96
NEK3-201ENST00000550331 SNURFQ9Y675 71 aa2.79□□□□□ -1.96
NEK3-201ENST00000550331 MT1GP13640 62 aa2.78□□□□□ -1.96
NEK3-201ENST00000550331 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
NEK3-201ENST00000550331 PP632Q6XCG6 107 aa2.77□□□□□ -1.97
NEK3-201ENST00000550331 A0A0D9SG42 100 aa2.76□□□□□ -1.97
NEK3-201ENST00000550331 KRTAP19-5Q3LI72 72 aa2.74□□□□□ -1.97
NEK3-201ENST00000550331 SPRR5A0A1B0GTR4 108 aa2.72□□□□□ -1.97
NEK3-201ENST00000550331 MT1MQ8N339 61 aa2.72□□□□□ -1.97
NEK3-201ENST00000550331 SERP1Q9Y6X1 66 aa2.72□□□□□ -1.97
NEK3-201ENST00000550331 RPS28P62857 69 aaKnown RBP2.71□□□□□ -1.98
NEK3-201ENST00000550331 SPINT4Q6UDR6 99 aa2.71□□□□□ -1.98
NEK3-201ENST00000550331 COA5Q86WW8 74 aa2.71□□□□□ -1.98
NEK3-201ENST00000550331 SPATA8Q6RVD6 105 aa2.7□□□□□ -1.98
NEK3-201ENST00000550331 MT1LQ93083 61 aa2.7□□□□□ -1.98
NEK3-201ENST00000550331 A0A1B0GU33 70 aa2.69□□□□□ -1.98
NEK3-201ENST00000550331 KRTAP12-1P59990 96 aa2.69□□□□□ -1.98
NEK3-201ENST00000550331 SERP2Q8N6R1 65 aa2.69□□□□□ -1.98
NEK3-201ENST00000550331 A6NED7 52 aa2.67□□□□□ -1.98
NEK3-201ENST00000550331 KTN1-AS1Q86SY8 53 aa2.67□□□□□ -1.98
NEK3-201ENST00000550331 C10orf95Q9H7T3 257 aa2.64□□□□□ -1.99
NEK3-201ENST00000550331 TNP1P09430 55 aa2.61□□□□□ -1.99
NEK3-201ENST00000550331 COX7CP15954 63 aa2.6□□□□□ -1.99
NEK3-201ENST00000550331 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
NEK3-201ENST00000550331 A0A1B0GU69 56 aa2.59□□□□□ -1.99
NEK3-201ENST00000550331 AHNAKQ09666 5890 aaKnown RBP2.59□□□□□ -2
NEK3-201ENST00000550331 A8MU10 97 aa2.57□□□□□ -2
NEK3-201ENST00000550331 H7BZZ5 65 aa2.57□□□□□ -2
NEK3-201ENST00000550331 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
NEK3-201ENST00000550331 KRTAP12-3P60328 96 aa2.53□□□□□ -2
NEK3-201ENST00000550331 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
NEK3-201ENST00000550331 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
NEK3-201ENST00000550331 CCDC179H3BU77 68 aa2.49□□□□□ -2.01
NEK3-201ENST00000550331 KRTAP25-1Q3LHN0 102 aa2.49□□□□□ -2.01
NEK3-201ENST00000550331 ATP5EP56381 51 aaPredicted RBP2.48□□□□□ -2.01
NEK3-201ENST00000550331 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
NEK3-201ENST00000550331 PRR15LQ9BU68 103 aa2.48□□□□□ -2.01
NEK3-201ENST00000550331 SYNE1Q8NF91 8797 aaKnown RBP2.47□□□□□ -2.01
NEK3-201ENST00000550331 BRK1Q8WUW1 75 aa2.46□□□□□ -2.02
NEK3-201ENST00000550331 TMEM258P61165 79 aa2.44□□□□□ -2.02
NEK3-201ENST00000550331 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
NEK3-201ENST00000550331 LINC01558Q9Y6Z2 57 aa2.41□□□□□ -2.02
NEK3-201ENST00000550331 UQCR11O14957 56 aa2.39□□□□□ -2.03
NEK3-201ENST00000550331 ROMO1P60602 79 aa2.35□□□□□ -2.03
NEK3-201ENST00000550331 MIR22HGQ0VDD5 57 aa2.31□□□□□ -2.04
NEK3-201ENST00000550331 MT1AP04731 61 aa2.3□□□□□ -2.04
NEK3-201ENST00000550331 KRTAP6-1Q3LI64 71 aa2.28□□□□□ -2.04
NEK3-201ENST00000550331 Q1T7F1 81 aa2.26□□□□□ -2.05
NEK3-201ENST00000550331 KRTAP6-2Q3LI66 62 aa2.21□□□□□ -2.06
NEK3-201ENST00000550331 CDC42SE1Q9NRR8 79 aa2.16□□□□□ -2.06
NEK3-201ENST00000550331 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
NEK3-201ENST00000550331 INE1O15225 51 aa2.02□□□□□ -2.09
NEK3-201ENST00000550331 LCE3DQ9BYE3 92 aa1.82□□□□□ -2.12
NEK3-201ENST00000550331 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
NEK3-201ENST00000550331 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
NEK3-201ENST00000550331 PRM1P04553 51 aa1.07□□□□□ -2.24
NEK3-201ENST00000550331 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 91.9 ms