RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
TROAP-211ENST00000549891 SERP2Q8N6R1 65 aa4.69□□□□□ -1.66
TROAP-211ENST00000549891 C10orf95Q9H7T3 257 aa4.69□□□□□ -1.66
TROAP-211ENST00000549891 LCE3AQ5TA76 89 aa4.65□□□□□ -1.67
TROAP-211ENST00000549891 TNP1P09430 55 aa4.64□□□□□ -1.67
TROAP-211ENST00000549891 SMIM26A0A096LP01 95 aa4.63□□□□□ -1.67
TROAP-211ENST00000549891 ANAPC13Q9BS18 74 aa4.62□□□□□ -1.67
TROAP-211ENST00000549891 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
TROAP-211ENST00000549891 KRTAP5-3Q6L8H2 238 aa4.6□□□□□ -1.67
TROAP-211ENST00000549891 KRTAP9-9Q9BYP9 154 aa4.58□□□□□ -1.68
TROAP-211ENST00000549891 KRTAP9-4Q9BYQ2 154 aa4.58□□□□□ -1.68
TROAP-211ENST00000549891 A0A1B0GU69 56 aa4.55□□□□□ -1.68
TROAP-211ENST00000549891 A8MU10 97 aa4.53□□□□□ -1.68
TROAP-211ENST00000549891 KRTAP20-2Q3LI61 65 aa4.53□□□□□ -1.68
TROAP-211ENST00000549891 COX7CP15954 63 aa4.52□□□□□ -1.69
TROAP-211ENST00000549891 KRTAP4-7Q9BYR0 210 aa4.52□□□□□ -1.69
TROAP-211ENST00000549891 KRTAP12-3P60328 96 aa4.5□□□□□ -1.69
TROAP-211ENST00000549891 RPS28P62857 69 aaKnown RBP4.5□□□□□ -1.69
TROAP-211ENST00000549891 V9GYY9 64 aa4.5□□□□□ -1.69
TROAP-211ENST00000549891 AHNAKQ09666 5890 aaKnown RBP4.49□□□□□ -1.69
TROAP-211ENST00000549891 CCDC179H3BU77 68 aa4.48□□□□□ -1.69
TROAP-211ENST00000549891 KRTAP12-4P60329 112 aa4.47□□□□□ -1.69
TROAP-211ENST00000549891 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
TROAP-211ENST00000549891 PRO0628Q9UI54 55 aa4.46□□□□□ -1.7
TROAP-211ENST00000549891 H7BZZ5 65 aa4.44□□□□□ -1.7
TROAP-211ENST00000549891 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
TROAP-211ENST00000549891 PRR15LQ9BU68 103 aa4.36□□□□□ -1.71
TROAP-211ENST00000549891 TMEM258P61165 79 aa4.34□□□□□ -1.71
TROAP-211ENST00000549891 MUC5ACP98088 5654 aa4.33□□□□□ -1.72
TROAP-211ENST00000549891 MUC5BQ9HC84 5762 aaPredicted RBP4.31□□□□□ -1.72
TROAP-211ENST00000549891 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
TROAP-211ENST00000549891 KRTAP25-1Q3LHN0 102 aa4.24□□□□□ -1.73
TROAP-211ENST00000549891 PMAIP1Q13794 54 aa4.23□□□□□ -1.73
TROAP-211ENST00000549891 ATP5EP56381 51 aaPredicted RBP4.22□□□□□ -1.73
TROAP-211ENST00000549891 KRTAP4-11Q9BYQ6 195 aa4.21□□□□□ -1.74
TROAP-211ENST00000549891 LINC01558Q9Y6Z2 57 aa4.2□□□□□ -1.74
TROAP-211ENST00000549891 UQCR11O14957 56 aa4.19□□□□□ -1.74
TROAP-211ENST00000549891 BRK1Q8WUW1 75 aa4.18□□□□□ -1.74
TROAP-211ENST00000549891 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
TROAP-211ENST00000549891 KRTAP5-2Q701N4 177 aa4.13□□□□□ -1.75
TROAP-211ENST00000549891 KRTAP15-1Q3LI76 137 aa4.11□□□□□ -1.75
TROAP-211ENST00000549891 LCE3CQ5T5A8 94 aa4.11□□□□□ -1.75
TROAP-211ENST00000549891 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
TROAP-211ENST00000549891 MT1AP04731 61 aa4.09□□□□□ -1.75
TROAP-211ENST00000549891 K7ERS5 55 aa4.08□□□□□ -1.76
TROAP-211ENST00000549891 KRTAP5-8O75690 187 aa4.06□□□□□ -1.76
TROAP-211ENST00000549891 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
TROAP-211ENST00000549891 MIR22HGQ0VDD5 57 aa4.05□□□□□ -1.76
TROAP-211ENST00000549891 KTN1-AS1Q86SY8 53 aa4.04□□□□□ -1.76
TROAP-211ENST00000549891 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
TROAP-211ENST00000549891 Q1T7F1 81 aa3.95□□□□□ -1.78
TROAP-211ENST00000549891 PSPHP1O15172 72 aa3.94□□□□□ -1.78
TROAP-211ENST00000549891 KRTAP6-2Q3LI66 62 aa3.94□□□□□ -1.78
TROAP-211ENST00000549891 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
TROAP-211ENST00000549891 A6NED7 52 aa3.8□□□□□ -1.8
TROAP-211ENST00000549891 CDC42SE1Q9NRR8 79 aa3.79□□□□□ -1.8
TROAP-211ENST00000549891 MT3P25713 68 aa3.78□□□□□ -1.8
TROAP-211ENST00000549891 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
TROAP-211ENST00000549891 ROMO1P60602 79 aa3.7□□□□□ -1.82
TROAP-211ENST00000549891 PRAC1Q96KF2 57 aa3.58□□□□□ -1.84
TROAP-211ENST00000549891 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
TROAP-211ENST00000549891 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
TROAP-211ENST00000549891 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
TROAP-211ENST00000549891 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
TROAP-211ENST00000549891 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
TROAP-211ENST00000549891 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
TROAP-211ENST00000549891 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
TROAP-211ENST00000549891 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
TROAP-211ENST00000549891 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
TROAP-211ENST00000549891 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
TROAP-211ENST00000549891 INE1O15225 51 aa2.79□□□□□ -1.96
TROAP-211ENST00000549891 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
TROAP-211ENST00000549891 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
TROAP-211ENST00000549891 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
TROAP-211ENST00000549891 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
TROAP-211ENST00000549891 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
TROAP-211ENST00000549891 PRM1P04553 51 aa1.85□□□□□ -2.11
TROAP-211ENST00000549891 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 33.7 ms