RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 KRTAP5-4Q6L8H1 288 aa4.66□□□□□ -1.66
GCN1-206ENST00000549815 ANAPC13Q9BS18 74 aa4.58□□□□□ -1.68
GCN1-206ENST00000549815 KRTAP4-6Q9BYQ5 205 aa4.57□□□□□ -1.68
GCN1-206ENST00000549815 CCDC179H3BU77 68 aa4.55□□□□□ -1.68
GCN1-206ENST00000549815 KRTAP4-7Q9BYR0 210 aa4.55□□□□□ -1.68
GCN1-206ENST00000549815 PRR15LQ9BU68 103 aa4.54□□□□□ -1.68
GCN1-206ENST00000549815 LINC01558Q9Y6Z2 57 aa4.53□□□□□ -1.68
GCN1-206ENST00000549815 KRTAP12-3P60328 96 aa4.52□□□□□ -1.69
GCN1-206ENST00000549815 KRTAP5-10Q6L8G5 202 aa4.51□□□□□ -1.69
GCN1-206ENST00000549815 ATP5EP56381 51 aaPredicted RBP4.5□□□□□ -1.69
GCN1-206ENST00000549815 KRTAP5-5Q701N2 237 aaPredicted RBP4.44□□□□□ -1.7
GCN1-206ENST00000549815 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
GCN1-206ENST00000549815 UQCR11O14957 56 aa4.41□□□□□ -1.7
GCN1-206ENST00000549815 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
GCN1-206ENST00000549815 KRTAP5-3Q6L8H2 238 aa4.37□□□□□ -1.71
GCN1-206ENST00000549815 SPRR5A0A1B0GTR4 108 aa4.35□□□□□ -1.71
GCN1-206ENST00000549815 KRTAP25-1Q3LHN0 102 aa4.35□□□□□ -1.71
GCN1-206ENST00000549815 TMEM258P61165 79 aa4.34□□□□□ -1.71
GCN1-206ENST00000549815 KRTAP5-7Q6L8G8 165 aa4.34□□□□□ -1.71
GCN1-206ENST00000549815 LOC100996750A0A140TA64 210 aa4.31□□□□□ -1.72
GCN1-206ENST00000549815 MIR22HGQ0VDD5 57 aa4.3□□□□□ -1.72
GCN1-206ENST00000549815 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
GCN1-206ENST00000549815 KRTAP19-4Q3LI73 84 aa4.27□□□□□ -1.73
GCN1-206ENST00000549815 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
GCN1-206ENST00000549815 K7ERS5 55 aa4.19□□□□□ -1.74
GCN1-206ENST00000549815 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
GCN1-206ENST00000549815 LCE3CQ5T5A8 94 aa4.16□□□□□ -1.74
GCN1-206ENST00000549815 PSPHP1O15172 72 aa4.14□□□□□ -1.75
GCN1-206ENST00000549815 Q1T7F1 81 aa4.12□□□□□ -1.75
GCN1-206ENST00000549815 V9GYY9 64 aa4.12□□□□□ -1.75
GCN1-206ENST00000549815 PCP4P48539 62 aa4.07□□□□□ -1.76
GCN1-206ENST00000549815 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
GCN1-206ENST00000549815 MT1AP04731 61 aa4.06□□□□□ -1.76
GCN1-206ENST00000549815 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
GCN1-206ENST00000549815 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
GCN1-206ENST00000549815 CDC42SE1Q9NRR8 79 aa3.98□□□□□ -1.77
GCN1-206ENST00000549815 A6NED7 52 aa3.97□□□□□ -1.77
GCN1-206ENST00000549815 KRTAP9-6A8MVA2 160 aa3.97□□□□□ -1.77
GCN1-206ENST00000549815 RPS28P62857 69 aaKnown RBP3.97□□□□□ -1.77
GCN1-206ENST00000549815 KRTAP9-4Q9BYQ2 154 aa3.94□□□□□ -1.78
GCN1-206ENST00000549815 ROMO1P60602 79 aa3.93□□□□□ -1.78
GCN1-206ENST00000549815 KRTAP5-8O75690 187 aa3.91□□□□□ -1.78
GCN1-206ENST00000549815 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
GCN1-206ENST00000549815 MUC5BQ9HC84 5762 aaPredicted RBP3.9□□□□□ -1.79
GCN1-206ENST00000549815 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
GCN1-206ENST00000549815 SVIPQ8NHG7 77 aa3.88□□□□□ -1.79
GCN1-206ENST00000549815 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
GCN1-206ENST00000549815 MUC5ACP98088 5654 aa3.84□□□□□ -1.79
GCN1-206ENST00000549815 MT3P25713 68 aa3.7□□□□□ -1.82
GCN1-206ENST00000549815 KRTAP9-9Q9BYP9 154 aa3.68□□□□□ -1.82
GCN1-206ENST00000549815 H3BS24 57 aa3.67□□□□□ -1.82
GCN1-206ENST00000549815 KRTAP5-1Q6L8H4 278 aa3.67□□□□□ -1.82
GCN1-206ENST00000549815 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
GCN1-206ENST00000549815 BRK1Q8WUW1 75 aa3.43□□□□□ -1.86
GCN1-206ENST00000549815 PMAIP1Q13794 54 aa3.3□□□□□ -1.88
GCN1-206ENST00000549815 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
GCN1-206ENST00000549815 PRO0628Q9UI54 55 aa3.29□□□□□ -1.88
GCN1-206ENST00000549815 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
GCN1-206ENST00000549815 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
GCN1-206ENST00000549815 KTN1-AS1Q86SY8 53 aa3.05□□□□□ -1.92
GCN1-206ENST00000549815 A0A0A0MQY5 61 aa3.04□□□□□ -1.92
GCN1-206ENST00000549815 PRAC1Q96KF2 57 aa3□□□□□ -1.93
GCN1-206ENST00000549815 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
GCN1-206ENST00000549815 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
GCN1-206ENST00000549815 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
GCN1-206ENST00000549815 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
GCN1-206ENST00000549815 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
GCN1-206ENST00000549815 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
GCN1-206ENST00000549815 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
GCN1-206ENST00000549815 LUZP6Q538Z0 58 aa2.66□□□□□ -1.98
GCN1-206ENST00000549815 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
GCN1-206ENST00000549815 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
GCN1-206ENST00000549815 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
GCN1-206ENST00000549815 NDUFAF8A1L188 74 aa2.34□□□□□ -2.03
GCN1-206ENST00000549815 INE1O15225 51 aa2.02□□□□□ -2.09
GCN1-206ENST00000549815 PRM1P04553 51 aa2.01□□□□□ -2.09
GCN1-206ENST00000549815 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
GCN1-206ENST00000549815 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 44 ms