RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 LCE3BQ5TA77 95 aa6.71□□□□□ -1.33
BRF1-215ENST00000549655 KRTAP19-4Q3LI73 84 aa6.7□□□□□ -1.34
BRF1-215ENST00000549655 CRCT1Q9UGL9 99 aa6.7□□□□□ -1.34
BRF1-215ENST00000549655 A0A0A0MQY5 61 aa6.68□□□□□ -1.34
BRF1-215ENST00000549655 KRTAP4-7Q9BYR0 210 aa6.66□□□□□ -1.34
BRF1-215ENST00000549655 MACF1Q9UPN3 7388 aaKnown RBP6.59□□□□□ -1.35
BRF1-215ENST00000549655 KRTAP9-9Q9BYP9 154 aa6.57□□□□□ -1.36
BRF1-215ENST00000549655 KRTAP9-4Q9BYQ2 154 aa6.57□□□□□ -1.36
BRF1-215ENST00000549655 SPRR2FQ96RM1 72 aa6.55□□□□□ -1.36
BRF1-215ENST00000549655 KRTAP19-3Q7Z4W3 81 aa6.54□□□□□ -1.36
BRF1-215ENST00000549655 KRTAP9-6A8MVA2 160 aa6.53□□□□□ -1.36
BRF1-215ENST00000549655 MUC12Q9UKN1 5478 aa6.52□□□□□ -1.36
BRF1-215ENST00000549655 MT1GP13640 62 aa6.49□□□□□ -1.37
BRF1-215ENST00000549655 KRTAP4-12Q9BQ66 201 aa6.45□□□□□ -1.38
BRF1-215ENST00000549655 MT1MQ8N339 61 aa6.44□□□□□ -1.38
BRF1-215ENST00000549655 KRTAP4-3Q9BYR4 195 aa6.4□□□□□ -1.39
BRF1-215ENST00000549655 LCE5AQ5TCM9 118 aa6.39□□□□□ -1.39
BRF1-215ENST00000549655 SYNE2Q8WXH0 6885 aaKnown RBP6.38□□□□□ -1.39
BRF1-215ENST00000549655 KRTAP5-9P26371 169 aa6.35□□□□□ -1.39
BRF1-215ENST00000549655 LCE1DQ5T752 114 aa6.28□□□□□ -1.4
BRF1-215ENST00000549655 LCE1AQ5T7P2 110 aa6.22□□□□□ -1.41
BRF1-215ENST00000549655 KRTAP4-2Q9BYR5 136 aa6.22□□□□□ -1.41
BRF1-215ENST00000549655 KRTAP4-9Q9BYQ8 210 aa6.2□□□□□ -1.42
BRF1-215ENST00000549655 MDN1Q9NU22 5596 aa6.16□□□□□ -1.42
BRF1-215ENST00000549655 KRTAP5-3Q6L8H2 238 aa6.15□□□□□ -1.43
BRF1-215ENST00000549655 SPRR2EP22531 72 aa6.14□□□□□ -1.43
BRF1-215ENST00000549655 SPRR2BP35325 72 aa6.14□□□□□ -1.43
BRF1-215ENST00000549655 SPRR2AP35326 72 aa6.14□□□□□ -1.43
BRF1-215ENST00000549655 KRTAP2-3P0C7H8 128 aa6.1□□□□□ -1.43
BRF1-215ENST00000549655 KRTAP6-3Q3LI67 103 aa6.1□□□□□ -1.43
BRF1-215ENST00000549655 KRTAP2-4Q9BYR9 128 aa6.1□□□□□ -1.43
BRF1-215ENST00000549655 KRTAP2-1Q9BYU5 128 aa6.1□□□□□ -1.43
BRF1-215ENST00000549655 DSTQ03001 7570 aaKnown RBP6.09□□□□□ -1.43
BRF1-215ENST00000549655 SPRR2DP22532 72 aa5.9□□□□□ -1.46
BRF1-215ENST00000549655 INE1O15225 51 aa5.87□□□□□ -1.47
BRF1-215ENST00000549655 KRTAP4-11Q9BYQ6 195 aa5.83□□□□□ -1.48
BRF1-215ENST00000549655 KRTAP5-5Q701N2 237 aaPredicted RBP5.77□□□□□ -1.49
BRF1-215ENST00000549655 KRTAP9-7A8MTY7 169 aa5.75□□□□□ -1.49
BRF1-215ENST00000549655 MT1AP04731 61 aa5.73□□□□□ -1.49
BRF1-215ENST00000549655 KRTAP6-1Q3LI64 71 aa5.72□□□□□ -1.49
BRF1-215ENST00000549655 NEBP20929 6669 aa5.62□□□□□ -1.51
BRF1-215ENST00000549655 SYNE1Q8NF91 8797 aaKnown RBP5.48□□□□□ -1.53
BRF1-215ENST00000549655 KRTAP5-4Q6L8H1 288 aa5.36□□□□□ -1.55
BRF1-215ENST00000549655 KRTAP12-4P60329 112 aa5.29□□□□□ -1.56
BRF1-215ENST00000549655 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
BRF1-215ENST00000549655 KRTAP2-2Q9BYT5 123 aa5.19□□□□□ -1.58
BRF1-215ENST00000549655 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
BRF1-215ENST00000549655 LCE3DQ9BYE3 92 aa5.18□□□□□ -1.58
BRF1-215ENST00000549655 MT3P25713 68 aa5.18□□□□□ -1.58
BRF1-215ENST00000549655 MT4P47944 62 aa5.15□□□□□ -1.58
BRF1-215ENST00000549655 KRTAP20-1Q3LI63 56 aa5.11□□□□□ -1.59
BRF1-215ENST00000549655 LCE3EQ5T5B0 92 aa5.07□□□□□ -1.6
BRF1-215ENST00000549655 KRTAP20-2Q3LI61 65 aa5.03□□□□□ -1.6
BRF1-215ENST00000549655 HMCN1Q96RW7 5635 aa4.92□□□□□ -1.62
BRF1-215ENST00000549655 KRTAP5-2Q701N4 177 aa4.91□□□□□ -1.62
BRF1-215ENST00000549655 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
BRF1-215ENST00000549655 PRM1P04553 51 aa4.57□□□□□ -1.68
BRF1-215ENST00000549655 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
BRF1-215ENST00000549655 LCE1EQ5T753 118 aa4.4□□□□□ -1.7
BRF1-215ENST00000549655 GPR98Q8WXG9 6306 aa4.28□□□□□ -1.72
BRF1-215ENST00000549655 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
BRF1-215ENST00000549655 LCE1BQ5T7P3 118 aa4.22□□□□□ -1.73
BRF1-215ENST00000549655 MUC5ACP98088 5654 aa4.2□□□□□ -1.74
BRF1-215ENST00000549655 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
BRF1-215ENST00000549655 KRTAP5-10Q6L8G5 202 aa4.16□□□□□ -1.74
BRF1-215ENST00000549655 LCE1CQ5T751 118 aa4.13□□□□□ -1.75
BRF1-215ENST00000549655 KRTAP5-8O75690 187 aa4.13□□□□□ -1.75
BRF1-215ENST00000549655 KRTAP5-7Q6L8G8 165 aa4.01□□□□□ -1.77
BRF1-215ENST00000549655 KRTAP5-11Q6L8G4 156 aa3.87□□□□□ -1.79
BRF1-215ENST00000549655 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
BRF1-215ENST00000549655 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
BRF1-215ENST00000549655 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.84
BRF1-215ENST00000549655 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
BRF1-215ENST00000549655 AHNAKQ09666 5890 aaKnown RBP3.33□□□□□ -1.88
BRF1-215ENST00000549655 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
BRF1-215ENST00000549655 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
BRF1-215ENST00000549655 KRTAP21-1Q3LI58 79 aa2.81□□□□□ -1.96
BRF1-215ENST00000549655 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 224.8 ms