RNA–Protein interactions for RNA: ENST00000549621.5

RITA1-202, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RITA1, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-202ENST00000549621 SPRR2FQ96RM1 72 aa7.4□□□□□ -1.22
RITA1-202ENST00000549621 MACF1Q9UPN3 7388 aaKnown RBP7.4□□□□□ -1.22
RITA1-202ENST00000549621 MT1GP13640 62 aa7.34□□□□□ -1.23
RITA1-202ENST00000549621 MUC12Q9UKN1 5478 aa7.34□□□□□ -1.23
RITA1-202ENST00000549621 MT1MQ8N339 61 aa7.33□□□□□ -1.24
RITA1-202ENST00000549621 KRTAP4-3Q9BYR4 195 aa7.28□□□□□ -1.24
RITA1-202ENST00000549621 LCE5AQ5TCM9 118 aa7.25□□□□□ -1.25
RITA1-202ENST00000549621 KRTAP5-9P26371 169 aa7.2□□□□□ -1.26
RITA1-202ENST00000549621 A0A0A0MQY5 61 aa7.2□□□□□ -1.26
RITA1-202ENST00000549621 SYNE2Q8WXH0 6885 aaKnown RBP7.17□□□□□ -1.26
RITA1-202ENST00000549621 KRTAP9-6A0A140TA67 174 aa7.14□□□□□ -1.27
RITA1-202ENST00000549621 LOC100996750A0A140TA64 210 aa7.09□□□□□ -1.27
RITA1-202ENST00000549621 LCE1AQ5T7P2 110 aa7.05□□□□□ -1.28
RITA1-202ENST00000549621 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.99□□□□□ -1.29
RITA1-202ENST00000549621 KRTAP2-3P0C7H8 128 aa6.97□□□□□ -1.29
RITA1-202ENST00000549621 KRTAP2-4Q9BYR9 128 aa6.97□□□□□ -1.29
RITA1-202ENST00000549621 KRTAP2-1Q9BYU5 128 aa6.97□□□□□ -1.29
RITA1-202ENST00000549621 SPRR2EP22531 72 aa6.94□□□□□ -1.3
RITA1-202ENST00000549621 SPRR2BP35325 72 aa6.94□□□□□ -1.3
RITA1-202ENST00000549621 SPRR2AP35326 72 aa6.94□□□□□ -1.3
RITA1-202ENST00000549621 KRTAP6-3Q3LI67 103 aa6.89□□□□□ -1.31
RITA1-202ENST00000549621 MDN1Q9NU22 5596 aa6.88□□□□□ -1.31
RITA1-202ENST00000549621 DSTQ03001 7570 aaKnown RBP6.78□□□□□ -1.32
RITA1-202ENST00000549621 SPRR2DP22532 72 aa6.67□□□□□ -1.34
RITA1-202ENST00000549621 INE1O15225 51 aa6.6□□□□□ -1.35
RITA1-202ENST00000549621 KRTAP5-5Q701N2 237 aaPredicted RBP6.59□□□□□ -1.36
RITA1-202ENST00000549621 KRTAP9-7A8MTY7 169 aa6.53□□□□□ -1.36
RITA1-202ENST00000549621 MT1AP04731 61 aa6.52□□□□□ -1.37
RITA1-202ENST00000549621 KRTAP6-1Q3LI64 71 aa6.5□□□□□ -1.37
RITA1-202ENST00000549621 LCE3BQ5TA77 95 aa6.4□□□□□ -1.39
RITA1-202ENST00000549621 NEBP20929 6669 aa6.38□□□□□ -1.39
RITA1-202ENST00000549621 SYNE1Q8NF91 8797 aaKnown RBP6.18□□□□□ -1.42
RITA1-202ENST00000549621 KRTAP9-4Q9BYQ2 154 aa6.16□□□□□ -1.42
RITA1-202ENST00000549621 KRTAP4-9Q9BYQ8 210 aa6.15□□□□□ -1.43
RITA1-202ENST00000549621 KRTAP5-4Q6L8H1 288 aa6.11□□□□□ -1.43
RITA1-202ENST00000549621 KRTAP12-4P60329 112 aa5.96□□□□□ -1.45
RITA1-202ENST00000549621 KRTAP6-2Q3LI66 62 aa5.92□□□□□ -1.46
RITA1-202ENST00000549621 LCE4AQ5TA78 99 aa5.87□□□□□ -1.47
RITA1-202ENST00000549621 LCE3DQ9BYE3 92 aa5.87□□□□□ -1.47
RITA1-202ENST00000549621 MT3P25713 68 aa5.86□□□□□ -1.47
RITA1-202ENST00000549621 KRTAP2-2Q9BYT5 123 aa5.84□□□□□ -1.47
RITA1-202ENST00000549621 KRTAP4-6Q9BYQ5 205 aa5.82□□□□□ -1.48
RITA1-202ENST00000549621 MT4P47944 62 aa5.81□□□□□ -1.48
RITA1-202ENST00000549621 KRTAP20-1Q3LI63 56 aa5.75□□□□□ -1.49
RITA1-202ENST00000549621 LCE3EQ5T5B0 92 aa5.74□□□□□ -1.49
RITA1-202ENST00000549621 KRTAP20-2Q3LI61 65 aa5.71□□□□□ -1.5
RITA1-202ENST00000549621 LCE1DQ5T752 114 aa5.65□□□□□ -1.51
RITA1-202ENST00000549621 KRTAP5-2Q701N4 177 aa5.61□□□□□ -1.51
RITA1-202ENST00000549621 HMCN1Q96RW7 5635 aa5.52□□□□□ -1.53
RITA1-202ENST00000549621 KRTAP5-3Q6L8H2 238 aa5.49□□□□□ -1.53
RITA1-202ENST00000549621 OBSCNQ5VST9 7968 aa5.36□□□□□ -1.55
RITA1-202ENST00000549621 PRM1P04553 51 aa5.21□□□□□ -1.57
RITA1-202ENST00000549621 LCE1EQ5T753 118 aa4.99□□□□□ -1.61
RITA1-202ENST00000549621 KRTAP4-11Q9BYQ6 195 aa4.85□□□□□ -1.63
RITA1-202ENST00000549621 AHNAK2Q8IVF2 5795 aa4.84□□□□□ -1.64
RITA1-202ENST00000549621 KRTAP5-1Q6L8H4 278 aa4.81□□□□□ -1.64
RITA1-202ENST00000549621 MUC5ACP98088 5654 aa4.76□□□□□ -1.65
RITA1-202ENST00000549621 KRTAP5-10Q6L8G5 202 aa4.76□□□□□ -1.65
RITA1-202ENST00000549621 LCE1BQ5T7P3 118 aa4.75□□□□□ -1.65
RITA1-202ENST00000549621 KRTAP4-2Q9BYR5 136 aa4.72□□□□□ -1.65
RITA1-202ENST00000549621 KRTAP5-8O75690 187 aa4.68□□□□□ -1.66
RITA1-202ENST00000549621 LCE1CQ5T751 118 aa4.67□□□□□ -1.66
RITA1-202ENST00000549621 KRTAP5-7Q6L8G8 165 aa4.57□□□□□ -1.68
RITA1-202ENST00000549621 GPR98Q8WXG9 6306 aa4.5□□□□□ -1.69
RITA1-202ENST00000549621 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
RITA1-202ENST00000549621 KRTAP21-2Q3LI59 83 aa4.24□□□□□ -1.73
RITA1-202ENST00000549621 KRTAP5-11Q6L8G4 156 aa4.11□□□□□ -1.75
RITA1-202ENST00000549621 KRTAP9-9Q9BYP9 154 aa4.09□□□□□ -1.76
RITA1-202ENST00000549621 MUC5BQ9HC84 5762 aaPredicted RBP4.03□□□□□ -1.76
RITA1-202ENST00000549621 KRTAP4-12Q9BQ66 201 aa3.85□□□□□ -1.79
RITA1-202ENST00000549621 KRTAP4-4Q9BYR3 166 aa3.8□□□□□ -1.8
RITA1-202ENST00000549621 AHNAKQ09666 5890 aaKnown RBP3.66□□□□□ -1.82
RITA1-202ENST00000549621 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
RITA1-202ENST00000549621 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
RITA1-202ENST00000549621 KRTAP21-1Q3LI58 79 aa3.23□□□□□ -1.89
RITA1-202ENST00000549621 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.91
RITA1-202ENST00000549621 MUC16Q8WXI7 14507 aa2.34□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms