RNA–Protein interactions for RNA: ENST00000549554.1

TUBA1C-205, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-205ENST00000549554 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
TUBA1C-205ENST00000549554 DSTQ03001 7570 aaKnown RBP7.1□□□□□ -1.27
TUBA1C-205ENST00000549554 K7ERS5 55 aa7.09□□□□□ -1.27
TUBA1C-205ENST00000549554 Q1T7F1 81 aa7.07□□□□□ -1.28
TUBA1C-205ENST00000549554 MT1LQ93083 61 aa7.07□□□□□ -1.28
TUBA1C-205ENST00000549554 PSPHP1O15172 72 aa7.06□□□□□ -1.28
TUBA1C-205ENST00000549554 MT1MQ8N339 61 aa7.02□□□□□ -1.29
TUBA1C-205ENST00000549554 KRTAP25-1Q3LHN0 102 aa6.97□□□□□ -1.29
TUBA1C-205ENST00000549554 KRTAP12-3P60328 96 aa6.94□□□□□ -1.3
TUBA1C-205ENST00000549554 A6NED7 52 aa6.87□□□□□ -1.31
TUBA1C-205ENST00000549554 KRTAP4-9Q9BYQ8 210 aa6.82□□□□□ -1.32
TUBA1C-205ENST00000549554 KRTAP4-3Q9BYR4 195 aa6.8□□□□□ -1.32
TUBA1C-205ENST00000549554 RPS28P62857 69 aaKnown RBP6.78□□□□□ -1.32
TUBA1C-205ENST00000549554 KRTAP19-4Q3LI73 84 aa6.78□□□□□ -1.32
TUBA1C-205ENST00000549554 LCE4AQ5TA78 99 aa6.77□□□□□ -1.33
TUBA1C-205ENST00000549554 KRTAP4-12Q9BQ66 201 aa6.77□□□□□ -1.33
TUBA1C-205ENST00000549554 PCP4P48539 62 aa6.75□□□□□ -1.33
TUBA1C-205ENST00000549554 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
TUBA1C-205ENST00000549554 LCE1DQ5T752 114 aa6.7□□□□□ -1.34
TUBA1C-205ENST00000549554 KRTAP4-7Q9BYR0 210 aa6.68□□□□□ -1.34
TUBA1C-205ENST00000549554 CDC42SE1Q9NRR8 79 aa6.68□□□□□ -1.34
TUBA1C-205ENST00000549554 MT4P47944 62 aa6.65□□□□□ -1.34
TUBA1C-205ENST00000549554 KRTAP5-4Q6L8H1 288 aa6.62□□□□□ -1.35
TUBA1C-205ENST00000549554 ROMO1P60602 79 aa6.56□□□□□ -1.36
TUBA1C-205ENST00000549554 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
TUBA1C-205ENST00000549554 HMCN1Q96RW7 5635 aa6.51□□□□□ -1.37
TUBA1C-205ENST00000549554 GPR98Q8WXG9 6306 aa6.49□□□□□ -1.37
TUBA1C-205ENST00000549554 KRTAP9-9Q9BYP9 154 aa6.43□□□□□ -1.38
TUBA1C-205ENST00000549554 KRTAP9-4Q9BYQ2 154 aa6.43□□□□□ -1.38
TUBA1C-205ENST00000549554 KRTAP5-5Q701N2 237 aaPredicted RBP6.4□□□□□ -1.38
TUBA1C-205ENST00000549554 LCE3CQ5T5A8 94 aa6.39□□□□□ -1.39
TUBA1C-205ENST00000549554 KRTAP12-4P60329 112 aa6.28□□□□□ -1.4
TUBA1C-205ENST00000549554 SPRR5A0A1B0GTR4 108 aa6.26□□□□□ -1.41
TUBA1C-205ENST00000549554 AHNAK2Q8IVF2 5795 aa6.25□□□□□ -1.41
TUBA1C-205ENST00000549554 KRTAP20-2Q3LI61 65 aa6.25□□□□□ -1.41
TUBA1C-205ENST00000549554 KRTAP5-10Q6L8G5 202 aa6.15□□□□□ -1.42
TUBA1C-205ENST00000549554 SYNE1Q8NF91 8797 aaKnown RBP6.12□□□□□ -1.43
TUBA1C-205ENST00000549554 KRTAP5-3Q6L8H2 238 aa6.06□□□□□ -1.44
TUBA1C-205ENST00000549554 MT1AP04731 61 aa6.04□□□□□ -1.44
TUBA1C-205ENST00000549554 BRK1Q8WUW1 75 aa5.99□□□□□ -1.45
TUBA1C-205ENST00000549554 KRTAP9-6A8MVA2 160 aa5.96□□□□□ -1.46
TUBA1C-205ENST00000549554 KRTAP6-1Q3LI64 71 aa5.96□□□□□ -1.46
TUBA1C-205ENST00000549554 KRTAP5-7Q6L8G8 165 aa5.92□□□□□ -1.46
TUBA1C-205ENST00000549554 KRTAP4-11Q9BYQ6 195 aa5.84□□□□□ -1.47
TUBA1C-205ENST00000549554 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
TUBA1C-205ENST00000549554 KRTAP4-2Q9BYR5 136 aa5.77□□□□□ -1.49
TUBA1C-205ENST00000549554 KRTAP6-2Q3LI66 62 aa5.68□□□□□ -1.5
TUBA1C-205ENST00000549554 PMAIP1Q13794 54 aa5.63□□□□□ -1.51
TUBA1C-205ENST00000549554 MT3P25713 68 aa5.53□□□□□ -1.52
TUBA1C-205ENST00000549554 KRTAP5-8O75690 187 aa5.47□□□□□ -1.53
TUBA1C-205ENST00000549554 OBSCNQ5VST9 7968 aa5.41□□□□□ -1.54
TUBA1C-205ENST00000549554 PRAC1Q96KF2 57 aa5.36□□□□□ -1.55
TUBA1C-205ENST00000549554 PRO0628Q9UI54 55 aa5.26□□□□□ -1.57
TUBA1C-205ENST00000549554 KRTAP5-1Q6L8H4 278 aa5.18□□□□□ -1.58
TUBA1C-205ENST00000549554 MUC5ACP98088 5654 aa5.1□□□□□ -1.59
TUBA1C-205ENST00000549554 SVIPQ8NHG7 77 aa5.1□□□□□ -1.59
TUBA1C-205ENST00000549554 MUC5BQ9HC84 5762 aaPredicted RBP5.09□□□□□ -1.6
TUBA1C-205ENST00000549554 AHNAKQ09666 5890 aaKnown RBP5.07□□□□□ -1.6
TUBA1C-205ENST00000549554 LCE1EQ5T753 118 aa5.05□□□□□ -1.6
TUBA1C-205ENST00000549554 KTN1-AS1Q86SY8 53 aa5.04□□□□□ -1.6
TUBA1C-205ENST00000549554 LCE1BQ5T7P3 118 aa4.74□□□□□ -1.65
TUBA1C-205ENST00000549554 A0A0A0MQY5 61 aa4.72□□□□□ -1.65
TUBA1C-205ENST00000549554 LCE1CQ5T751 118 aa4.67□□□□□ -1.66
TUBA1C-205ENST00000549554 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
TUBA1C-205ENST00000549554 LUZP6Q538Z0 58 aa4.62□□□□□ -1.67
TUBA1C-205ENST00000549554 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
TUBA1C-205ENST00000549554 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.27□□□□□ -1.73
TUBA1C-205ENST00000549554 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
TUBA1C-205ENST00000549554 LCE1FQ5T754 118 aa4.11□□□□□ -1.75
TUBA1C-205ENST00000549554 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
TUBA1C-205ENST00000549554 KRTAP21-2Q3LI59 83 aa3.91□□□□□ -1.78
TUBA1C-205ENST00000549554 PHGR1C9JFL3 82 aa3.64□□□□□ -1.83
TUBA1C-205ENST00000549554 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
TUBA1C-205ENST00000549554 PRM1P04553 51 aa3.34□□□□□ -1.87
TUBA1C-205ENST00000549554 MUC19Q7Z5P9 8384 aa3.33□□□□□ -1.88
TUBA1C-205ENST00000549554 INE1O15225 51 aa3.01□□□□□ -1.93
TUBA1C-205ENST00000549554 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
TUBA1C-205ENST00000549554 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 80.9 ms