RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 UQCR11O14957 56 aa1.11□□□□□ -2.23
DEPDC4-206ENST00000549100 PP632Q6XCG6 107 aa1.11□□□□□ -2.23
DEPDC4-206ENST00000549100 FAT4Q6V0I7 4981 aa1.11□□□□□ -2.23
DEPDC4-206ENST00000549100 A0A0D9SG42 100 aa1.1□□□□□ -2.23
DEPDC4-206ENST00000549100 SPINT4Q6UDR6 99 aa1.1□□□□□ -2.23
DEPDC4-206ENST00000549100 KRTAP12-1P59990 96 aa1.09□□□□□ -2.23
DEPDC4-206ENST00000549100 KRTAP25-1Q3LHN0 102 aa1.08□□□□□ -2.24
DEPDC4-206ENST00000549100 S4R3F8 94 aa1.08□□□□□ -2.24
DEPDC4-206ENST00000549100 DMBT1Q9UGM3 2413 aaPredicted RBP1.08□□□□□ -2.24
DEPDC4-206ENST00000549100 HMCN2Q8NDA2 5059 aa1.08□□□□□ -2.24
DEPDC4-206ENST00000549100 RNF213Q63HN8 5207 aa1.07□□□□□ -2.24
DEPDC4-206ENST00000549100 FLGP20930 4061 aaPredicted RBP1.07□□□□□ -2.24
DEPDC4-206ENST00000549100 LINC01554Q52M75 96 aa1.06□□□□□ -2.24
DEPDC4-206ENST00000549100 R4GN34 69 aa1.05□□□□□ -2.24
DEPDC4-206ENST00000549100 FCGBPQ9Y6R7 5405 aaPredicted RBP1.05□□□□□ -2.24
DEPDC4-206ENST00000549100 ROMO1P60602 79 aa1.04□□□□□ -2.24
DEPDC4-206ENST00000549100 CRCT1Q9UGL9 99 aa1.03□□□□□ -2.24
DEPDC4-206ENST00000549100 K7ERS5 55 aa1.02□□□□□ -2.25
DEPDC4-206ENST00000549100 M0QZ58 72 aa1.02□□□□□ -2.25
DEPDC4-206ENST00000549100 MT1FP04733 61 aa1□□□□□ -2.25
DEPDC4-206ENST00000549100 MT1HP80294 61 aa1□□□□□ -2.25
DEPDC4-206ENST00000549100 MT2AP02795 61 aa0.99□□□□□ -2.25
DEPDC4-206ENST00000549100 FSIP2Q5CZC0 6907 aa0.97□□□□□ -2.25
DEPDC4-206ENST00000549100 SSPOA2VEC9 5147 aa0.97□□□□□ -2.25
DEPDC4-206ENST00000549100 MT1BP07438 61 aa0.97□□□□□ -2.25
DEPDC4-206ENST00000549100 KRTAP6-3Q3LI67 103 aa0.97□□□□□ -2.25
DEPDC4-206ENST00000549100 GPR98Q8WXG9 6306 aa0.95□□□□□ -2.26
DEPDC4-206ENST00000549100 SPRR2GQ9BYE4 73 aa0.95□□□□□ -2.26
DEPDC4-206ENST00000549100 MT1XP80297 61 aa0.94□□□□□ -2.26
DEPDC4-206ENST00000549100 KRTAP19-8Q3LI54 63 aa0.94□□□□□ -2.26
DEPDC4-206ENST00000549100 PLAC4Q8WY50 150 aa0.93□□□□□ -2.26
DEPDC4-206ENST00000549100 KRTAP12-3P60328 96 aa0.92□□□□□ -2.26
DEPDC4-206ENST00000549100 NEBP20929 6669 aa0.89□□□□□ -2.27
DEPDC4-206ENST00000549100 M0R2T5 61 aa0.88□□□□□ -2.27
DEPDC4-206ENST00000549100 TNP1P09430 55 aa0.88□□□□□ -2.27
DEPDC4-206ENST00000549100 KRTAP19-5Q3LI72 72 aa0.88□□□□□ -2.27
DEPDC4-206ENST00000549100 USH2AO75445 5202 aa0.88□□□□□ -2.27
DEPDC4-206ENST00000549100 KRTAP8-1Q8IUC2 63 aa0.87□□□□□ -2.27
DEPDC4-206ENST00000549100 KRTAP12-4P60329 112 aa0.86□□□□□ -2.27
DEPDC4-206ENST00000549100 KRTAP20-1Q3LI63 56 aa0.86□□□□□ -2.27
DEPDC4-206ENST00000549100 KRTAP19-7Q3SYF9 63 aa0.85□□□□□ -2.27
DEPDC4-206ENST00000549100 MUC12Q9UKN1 5478 aa0.85□□□□□ -2.27
DEPDC4-206ENST00000549100 AHNAK2Q8IVF2 5795 aa0.85□□□□□ -2.27
DEPDC4-206ENST00000549100 KMT2DO14686 5537 aa0.84□□□□□ -2.27
DEPDC4-206ENST00000549100 SYNE2Q8WXH0 6885 aaKnown RBP0.83□□□□□ -2.28
DEPDC4-206ENST00000549100 PRO2289Q9P1D8 64 aa0.82□□□□□ -2.28
DEPDC4-206ENST00000549100 MT1LQ93083 61 aa0.81□□□□□ -2.28
DEPDC4-206ENST00000549100 MT1EP04732 61 aa0.8□□□□□ -2.28
DEPDC4-206ENST00000549100 MACF1Q9UPN3 7388 aaKnown RBP0.79□□□□□ -2.28
DEPDC4-206ENST00000549100 KRTAP19-6Q3LI70 58 aa0.78□□□□□ -2.28
DEPDC4-206ENST00000549100 AHNAKQ09666 5890 aaKnown RBP0.78□□□□□ -2.28
DEPDC4-206ENST00000549100 MDN1Q9NU22 5596 aa0.77□□□□□ -2.29
DEPDC4-206ENST00000549100 KRTAP2-3P0C7H8 128 aa0.77□□□□□ -2.29
DEPDC4-206ENST00000549100 MT1GP13640 62 aa0.77□□□□□ -2.29
DEPDC4-206ENST00000549100 KRTAP2-4Q9BYR9 128 aa0.77□□□□□ -2.29
DEPDC4-206ENST00000549100 KRTAP2-1Q9BYU5 128 aa0.77□□□□□ -2.29
DEPDC4-206ENST00000549100 MUC5BQ9HC84 5762 aaPredicted RBP0.76□□□□□ -2.29
DEPDC4-206ENST00000549100 MT1MQ8N339 61 aa0.75□□□□□ -2.29
DEPDC4-206ENST00000549100 KRTAP5-10Q6L8G5 202 aa0.72□□□□□ -2.29
DEPDC4-206ENST00000549100 KRTAP19-3Q7Z4W3 81 aa0.72□□□□□ -2.29
DEPDC4-206ENST00000549100 KRTAP6-1Q3LI64 71 aa0.71□□□□□ -2.3
DEPDC4-206ENST00000549100 MUC5ACP98088 5654 aa0.69□□□□□ -2.3
DEPDC4-206ENST00000549100 SPRR2FQ96RM1 72 aa0.69□□□□□ -2.3
DEPDC4-206ENST00000549100 INE1O15225 51 aa0.68□□□□□ -2.3
DEPDC4-206ENST00000549100 SYNE1Q8NF91 8797 aaKnown RBP0.68□□□□□ -2.3
DEPDC4-206ENST00000549100 DSTQ03001 7570 aaKnown RBP0.66□□□□□ -2.3
DEPDC4-206ENST00000549100 MT1AP04731 61 aa0.65□□□□□ -2.31
DEPDC4-206ENST00000549100 SPRR2EP22531 72 aa0.64□□□□□ -2.31
DEPDC4-206ENST00000549100 SPRR2BP35325 72 aa0.64□□□□□ -2.31
DEPDC4-206ENST00000549100 SPRR2AP35326 72 aa0.64□□□□□ -2.31
DEPDC4-206ENST00000549100 KRTAP6-2Q3LI66 62 aa0.62□□□□□ -2.31
DEPDC4-206ENST00000549100 PRM1P04553 51 aa0.6□□□□□ -2.31
DEPDC4-206ENST00000549100 SPRR2DP22532 72 aa0.6□□□□□ -2.31
DEPDC4-206ENST00000549100 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
DEPDC4-206ENST00000549100 MT4P47944 62 aa0.56□□□□□ -2.32
DEPDC4-206ENST00000549100 KRTAP20-2Q3LI61 65 aa0.55□□□□□ -2.32
DEPDC4-206ENST00000549100 PHGR1C9JFL3 82 aa0.42□□□□□ -2.34
DEPDC4-206ENST00000549100 KRTAP21-1Q3LI58 79 aa0.38□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 90.2 ms