RNA–Protein interactions for RNA: ENST00000549094.1

SMPDL3B-206, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 5 BASIC

Gene SMPDL3B, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-206ENST00000549094 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
SMPDL3B-206ENST00000549094 MT1XP80297 61 aa5.26□□□□□ -1.57
SMPDL3B-206ENST00000549094 KRTAP9-7A8MTY7 169 aa5.24□□□□□ -1.57
SMPDL3B-206ENST00000549094 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
SMPDL3B-206ENST00000549094 MACF1Q9UPN3 7388 aaKnown RBP5.21□□□□□ -1.58
SMPDL3B-206ENST00000549094 SYNE2Q8WXH0 6885 aaKnown RBP5.1□□□□□ -1.59
SMPDL3B-206ENST00000549094 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.59
SMPDL3B-206ENST00000549094 KRTAP10-7P60409 375 aaPredicted RBP5.08□□□□□ -1.6
SMPDL3B-206ENST00000549094 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
SMPDL3B-206ENST00000549094 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
SMPDL3B-206ENST00000549094 KRTAP6-3Q3LI67 103 aa5.01□□□□□ -1.61
SMPDL3B-206ENST00000549094 LCE3CQ5T5A8 94 aa4.97□□□□□ -1.61
SMPDL3B-206ENST00000549094 LCE5AQ5TCM9 118 aa4.97□□□□□ -1.61
SMPDL3B-206ENST00000549094 KRTAP19-5Q3LI72 72 aa4.94□□□□□ -1.62
SMPDL3B-206ENST00000549094 MUC12Q9UKN1 5478 aa4.84□□□□□ -1.63
SMPDL3B-206ENST00000549094 KRTAP5-9P26371 169 aa4.83□□□□□ -1.64
SMPDL3B-206ENST00000549094 NEBP20929 6669 aa4.79□□□□□ -1.64
SMPDL3B-206ENST00000549094 KMT2DO14686 5537 aa4.78□□□□□ -1.64
SMPDL3B-206ENST00000549094 MDN1Q9NU22 5596 aa4.73□□□□□ -1.65
SMPDL3B-206ENST00000549094 KRTAP2-3P0C7H8 128 aa4.71□□□□□ -1.66
SMPDL3B-206ENST00000549094 KRTAP2-4Q9BYR9 128 aa4.71□□□□□ -1.66
SMPDL3B-206ENST00000549094 KRTAP2-1Q9BYU5 128 aa4.71□□□□□ -1.66
SMPDL3B-206ENST00000549094 KRTAP9-6A8MVA2 160 aa4.68□□□□□ -1.66
SMPDL3B-206ENST00000549094 KRTAP19-7Q3SYF9 63 aa4.67□□□□□ -1.66
SMPDL3B-206ENST00000549094 SPRR2FQ96RM1 72 aa4.65□□□□□ -1.66
SMPDL3B-206ENST00000549094 KRTAP20-1Q3LI63 56 aa4.61□□□□□ -1.67
SMPDL3B-206ENST00000549094 MT1LQ93083 61 aa4.59□□□□□ -1.67
SMPDL3B-206ENST00000549094 SPRR2EP22531 72 aa4.57□□□□□ -1.68
SMPDL3B-206ENST00000549094 SPRR2BP35325 72 aa4.57□□□□□ -1.68
SMPDL3B-206ENST00000549094 SPRR2AP35326 72 aa4.57□□□□□ -1.68
SMPDL3B-206ENST00000549094 MT1EP04732 61 aa4.57□□□□□ -1.68
SMPDL3B-206ENST00000549094 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
SMPDL3B-206ENST00000549094 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
SMPDL3B-206ENST00000549094 SPRR2DP22532 72 aa4.43□□□□□ -1.7
SMPDL3B-206ENST00000549094 KRTAP2-2Q9BYT5 123 aa4.37□□□□□ -1.71
SMPDL3B-206ENST00000549094 KRTAP19-3Q7Z4W3 81 aa4.36□□□□□ -1.71
SMPDL3B-206ENST00000549094 MT1GP13640 62 aa4.32□□□□□ -1.72
SMPDL3B-206ENST00000549094 MT1MQ8N339 61 aa4.25□□□□□ -1.73
SMPDL3B-206ENST00000549094 DSTQ03001 7570 aaKnown RBP4.21□□□□□ -1.74
SMPDL3B-206ENST00000549094 KRTAP4-3Q9BYR4 195 aa4.19□□□□□ -1.74
SMPDL3B-206ENST00000549094 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
SMPDL3B-206ENST00000549094 MT1AP04731 61 aa4.03□□□□□ -1.77
SMPDL3B-206ENST00000549094 GPR98Q8WXG9 6306 aa3.93□□□□□ -1.78
SMPDL3B-206ENST00000549094 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
SMPDL3B-206ENST00000549094 HMCN1Q96RW7 5635 aa3.88□□□□□ -1.79
SMPDL3B-206ENST00000549094 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
SMPDL3B-206ENST00000549094 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.79
SMPDL3B-206ENST00000549094 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.79
SMPDL3B-206ENST00000549094 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.8
SMPDL3B-206ENST00000549094 MT4P47944 62 aa3.83□□□□□ -1.8
SMPDL3B-206ENST00000549094 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
SMPDL3B-206ENST00000549094 PRM1P04553 51 aa3.7□□□□□ -1.82
SMPDL3B-206ENST00000549094 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
SMPDL3B-206ENST00000549094 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
SMPDL3B-206ENST00000549094 KRTAP5-10Q6L8G5 202 aa3.61□□□□□ -1.83
SMPDL3B-206ENST00000549094 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
SMPDL3B-206ENST00000549094 MT3P25713 68 aa3.5□□□□□ -1.85
SMPDL3B-206ENST00000549094 KRTAP5-7Q6L8G8 165 aa3.48□□□□□ -1.85
SMPDL3B-206ENST00000549094 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
SMPDL3B-206ENST00000549094 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
SMPDL3B-206ENST00000549094 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
SMPDL3B-206ENST00000549094 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
SMPDL3B-206ENST00000549094 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
SMPDL3B-206ENST00000549094 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
SMPDL3B-206ENST00000549094 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
SMPDL3B-206ENST00000549094 AHNAKQ09666 5890 aaKnown RBP3.05□□□□□ -1.92
SMPDL3B-206ENST00000549094 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
SMPDL3B-206ENST00000549094 MUC5ACP98088 5654 aa3□□□□□ -1.93
SMPDL3B-206ENST00000549094 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
SMPDL3B-206ENST00000549094 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
SMPDL3B-206ENST00000549094 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
SMPDL3B-206ENST00000549094 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
SMPDL3B-206ENST00000549094 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
SMPDL3B-206ENST00000549094 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
SMPDL3B-206ENST00000549094 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
SMPDL3B-206ENST00000549094 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
SMPDL3B-206ENST00000549094 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 38.2 ms