RNA–Protein interactions for RNA: ENST00000549039.5

CTDSP2-205, Transcript of CTD small phosphatase 2, humanhuman

TSL 2

Gene CTDSP2, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-205ENST00000549039 KRTAP5-10Q6L8G5 202 aa4.18□□□□□ -1.74
CTDSP2-205ENST00000549039 A8MU10 97 aa4.17□□□□□ -1.74
CTDSP2-205ENST00000549039 A0A1B0GU69 56 aa4.16□□□□□ -1.74
CTDSP2-205ENST00000549039 COX7CP15954 63 aa4.1□□□□□ -1.75
CTDSP2-205ENST00000549039 KRTAP4-7Q9BYR0 210 aa4.1□□□□□ -1.75
CTDSP2-205ENST00000549039 H7BZZ5 65 aa4.08□□□□□ -1.76
CTDSP2-205ENST00000549039 KRTAP5-3Q6L8H2 238 aa4.06□□□□□ -1.76
CTDSP2-205ENST00000549039 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
CTDSP2-205ENST00000549039 KRTAP5-7Q6L8G8 165 aa4.04□□□□□ -1.76
CTDSP2-205ENST00000549039 KRTAP20-2Q3LI61 65 aa4.02□□□□□ -1.77
CTDSP2-205ENST00000549039 PRR15LQ9BU68 103 aa3.98□□□□□ -1.77
CTDSP2-205ENST00000549039 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
CTDSP2-205ENST00000549039 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.78
CTDSP2-205ENST00000549039 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
CTDSP2-205ENST00000549039 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
CTDSP2-205ENST00000549039 LOC100996750A0A140TA64 210 aa3.9□□□□□ -1.79
CTDSP2-205ENST00000549039 ANAPC13Q9BS18 74 aa3.86□□□□□ -1.79
CTDSP2-205ENST00000549039 LINC01558Q9Y6Z2 57 aa3.83□□□□□ -1.8
CTDSP2-205ENST00000549039 UQCR11O14957 56 aa3.82□□□□□ -1.8
CTDSP2-205ENST00000549039 KRTAP25-1Q3LHN0 102 aa3.81□□□□□ -1.8
CTDSP2-205ENST00000549039 V9GYY9 64 aa3.8□□□□□ -1.8
CTDSP2-205ENST00000549039 CCDC179H3BU77 68 aa3.79□□□□□ -1.8
CTDSP2-205ENST00000549039 ATP5EP56381 51 aaPredicted RBP3.79□□□□□ -1.8
CTDSP2-205ENST00000549039 KRTAP19-4Q3LI73 84 aa3.74□□□□□ -1.81
CTDSP2-205ENST00000549039 K7ERS5 55 aa3.72□□□□□ -1.81
CTDSP2-205ENST00000549039 MIR22HGQ0VDD5 57 aa3.72□□□□□ -1.81
CTDSP2-205ENST00000549039 KRTAP4-11Q9BYQ6 195 aa3.72□□□□□ -1.81
CTDSP2-205ENST00000549039 KRTAP15-1Q3LI76 137 aa3.7□□□□□ -1.82
CTDSP2-205ENST00000549039 LCE3CQ5T5A8 94 aa3.7□□□□□ -1.82
CTDSP2-205ENST00000549039 H3BS24 57 aa3.65□□□□□ -1.83
CTDSP2-205ENST00000549039 OBSCNQ5VST9 7968 aa3.64□□□□□ -1.83
CTDSP2-205ENST00000549039 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
CTDSP2-205ENST00000549039 MT1AP04731 61 aa3.64□□□□□ -1.83
CTDSP2-205ENST00000549039 KRTAP6-1Q3LI64 71 aa3.64□□□□□ -1.83
CTDSP2-205ENST00000549039 KRTAP5-2Q701N4 177 aa3.64□□□□□ -1.83
CTDSP2-205ENST00000549039 KRTAP23-1A1A580 65 aa3.62□□□□□ -1.83
CTDSP2-205ENST00000549039 TMEM258P61165 79 aa3.61□□□□□ -1.83
CTDSP2-205ENST00000549039 PRO0628Q9UI54 55 aa3.6□□□□□ -1.83
CTDSP2-205ENST00000549039 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
CTDSP2-205ENST00000549039 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
CTDSP2-205ENST00000549039 AHNAKQ09666 5890 aaKnown RBP3.56□□□□□ -1.84
CTDSP2-205ENST00000549039 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
CTDSP2-205ENST00000549039 PSPHP1O15172 72 aa3.55□□□□□ -1.84
CTDSP2-205ENST00000549039 KRTAP9-4Q9BYQ2 154 aa3.55□□□□□ -1.84
CTDSP2-205ENST00000549039 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
CTDSP2-205ENST00000549039 RPS28P62857 69 aaKnown RBP3.48□□□□□ -1.85
CTDSP2-205ENST00000549039 CDC42SE1Q9NRR8 79 aa3.48□□□□□ -1.85
CTDSP2-205ENST00000549039 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
CTDSP2-205ENST00000549039 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
CTDSP2-205ENST00000549039 Q1T7F1 81 aa3.45□□□□□ -1.86
CTDSP2-205ENST00000549039 PMAIP1Q13794 54 aa3.44□□□□□ -1.86
CTDSP2-205ENST00000549039 A6NED7 52 aa3.42□□□□□ -1.86
CTDSP2-205ENST00000549039 ROMO1P60602 79 aa3.4□□□□□ -1.87
CTDSP2-205ENST00000549039 MT3P25713 68 aa3.36□□□□□ -1.87
CTDSP2-205ENST00000549039 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
CTDSP2-205ENST00000549039 BRK1Q8WUW1 75 aa3.28□□□□□ -1.88
CTDSP2-205ENST00000549039 KTN1-AS1Q86SY8 53 aa3.24□□□□□ -1.89
CTDSP2-205ENST00000549039 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
CTDSP2-205ENST00000549039 PRAC1Q96KF2 57 aa3.05□□□□□ -1.92
CTDSP2-205ENST00000549039 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
CTDSP2-205ENST00000549039 LUZP6Q538Z0 58 aa2.95□□□□□ -1.94
CTDSP2-205ENST00000549039 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
CTDSP2-205ENST00000549039 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
CTDSP2-205ENST00000549039 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
CTDSP2-205ENST00000549039 NDUFAF8A1L188 74 aa2.65□□□□□ -1.99
CTDSP2-205ENST00000549039 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
CTDSP2-205ENST00000549039 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
CTDSP2-205ENST00000549039 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
CTDSP2-205ENST00000549039 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.57□□□□□ -2
CTDSP2-205ENST00000549039 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
CTDSP2-205ENST00000549039 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
CTDSP2-205ENST00000549039 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
CTDSP2-205ENST00000549039 INE1O15225 51 aa2.3□□□□□ -2.04
CTDSP2-205ENST00000549039 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
CTDSP2-205ENST00000549039 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
CTDSP2-205ENST00000549039 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
CTDSP2-205ENST00000549039 PRM1P04553 51 aa1.74□□□□□ -2.13
CTDSP2-205ENST00000549039 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 108 ms