RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 TMEM254Q8TBM7 123 aa1□□□□□ -2.25
CNOT2-216ENST00000548939 MRPL34Q9BQ48 92 aaKnown RBP1□□□□□ -2.25
CNOT2-216ENST00000548939 J3KT08 172 aa0.99□□□□□ -2.25
CNOT2-216ENST00000548939 ATOX1O00244 68 aa0.99□□□□□ -2.25
CNOT2-216ENST00000548939 NDUFB1O75438 58 aa0.99□□□□□ -2.25
CNOT2-216ENST00000548939 SCGB1A1P11684 91 aa0.99□□□□□ -2.25
CNOT2-216ENST00000548939 LINC00208Q96KT6 92 aa0.99□□□□□ -2.25
CNOT2-216ENST00000548939 CRIPTQ9P021 101 aa0.99□□□□□ -2.25
CNOT2-216ENST00000548939 S4R3F8 94 aa0.99□□□□□ -2.25
CNOT2-216ENST00000548939 TRAV7A0A075B6U4 112 aa0.98□□□□□ -2.25
CNOT2-216ENST00000548939 TRAV22A0A0B4J277 110 aa0.98□□□□□ -2.25
CNOT2-216ENST00000548939 A0A1B0GW54 56 aa0.98□□□□□ -2.25
CNOT2-216ENST00000548939 C8orf87E5RJ46 101 aa0.98□□□□□ -2.25
CNOT2-216ENST00000548939 COX7CP15954 63 aa0.98□□□□□ -2.25
CNOT2-216ENST00000548939 SERP2Q8N6R1 65 aa0.98□□□□□ -2.25
CNOT2-216ENST00000548939 A8MUN3 132 aa0.97□□□□□ -2.25
CNOT2-216ENST00000548939 H7BZZ5 65 aa0.97□□□□□ -2.25
CNOT2-216ENST00000548939 C4orf26Q17RF5 130 aa0.97□□□□□ -2.25
CNOT2-216ENST00000548939 UQCRQO14949 82 aa0.96□□□□□ -2.26
CNOT2-216ENST00000548939 CYP4F30PQ9H0H9 118 aa0.96□□□□□ -2.26
CNOT2-216ENST00000548939 SYNE1Q8NF91 8797 aaKnown RBP0.96□□□□□ -2.26
CNOT2-216ENST00000548939 MT1EP04732 61 aa0.95□□□□□ -2.26
CNOT2-216ENST00000548939 MP68P56378 58 aa0.95□□□□□ -2.26
CNOT2-216ENST00000548939 C7orf65Q6ZTY9 151 aa0.95□□□□□ -2.26
CNOT2-216ENST00000548939 LOC101927531A0A1B0GV80 90 aa0.94□□□□□ -2.26
CNOT2-216ENST00000548939 TP53AIP1Q9HCN2 124 aa0.94□□□□□ -2.26
CNOT2-216ENST00000548939 R4GN34 69 aa0.94□□□□□ -2.26
CNOT2-216ENST00000548939 MT1GP13640 62 aa0.93□□□□□ -2.26
CNOT2-216ENST00000548939 TMEM258P61165 79 aa0.93□□□□□ -2.26
CNOT2-216ENST00000548939 KRTAP19-7Q3SYF9 63 aa0.93□□□□□ -2.26
CNOT2-216ENST00000548939 LINC01554Q52M75 96 aa0.93□□□□□ -2.26
CNOT2-216ENST00000548939 COA5Q86WW8 74 aa0.93□□□□□ -2.26
CNOT2-216ENST00000548939 MT1MQ8N339 61 aa0.93□□□□□ -2.26
CNOT2-216ENST00000548939 SMIM20Q8N5G0 67 aa0.93□□□□□ -2.26
CNOT2-216ENST00000548939 DMAC1Q96GE9 116 aa0.93□□□□□ -2.26
CNOT2-216ENST00000548939 H3BPC8 53 aa0.91□□□□□ -2.26
CNOT2-216ENST00000548939 PSPHP1O15172 72 aa0.9□□□□□ -2.27
CNOT2-216ENST00000548939 NDUFC1O43677 76 aa0.9□□□□□ -2.27
CNOT2-216ENST00000548939 CHKB-CPT1BH3BT56 60 aa0.89□□□□□ -2.27
CNOT2-216ENST00000548939 M0QZ58 72 aa0.89□□□□□ -2.27
CNOT2-216ENST00000548939 PRR15LQ9BU68 103 aa0.89□□□□□ -2.27
CNOT2-216ENST00000548939 SERP1Q9Y6X1 66 aa0.89□□□□□ -2.27
CNOT2-216ENST00000548939 ACYP2P14621 99 aa0.88□□□□□ -2.27
CNOT2-216ENST00000548939 ATP5EP56381 51 aaPredicted RBP0.88□□□□□ -2.27
CNOT2-216ENST00000548939 SPATA8Q6RVD6 105 aa0.88□□□□□ -2.27
CNOT2-216ENST00000548939 KRTAP19-5Q3LI72 72 aa0.87□□□□□ -2.27
CNOT2-216ENST00000548939 SMIM26A0A096LP01 95 aa0.86□□□□□ -2.27
CNOT2-216ENST00000548939 A0A0D9SG42 100 aa0.86□□□□□ -2.27
CNOT2-216ENST00000548939 MT1LQ93083 61 aa0.86□□□□□ -2.27
CNOT2-216ENST00000548939 A0A1B0GU69 56 aa0.85□□□□□ -2.27
CNOT2-216ENST00000548939 SEC61GP60059 68 aa0.85□□□□□ -2.27
CNOT2-216ENST00000548939 Q1T7F1 81 aa0.85□□□□□ -2.27
CNOT2-216ENST00000548939 LUZP6Q538Z0 58 aa0.85□□□□□ -2.27
CNOT2-216ENST00000548939 LINC01558Q9Y6Z2 57 aa0.85□□□□□ -2.27
CNOT2-216ENST00000548939 A6NED7 52 aa0.84□□□□□ -2.27
CNOT2-216ENST00000548939 RPS28P62857 69 aaKnown RBP0.84□□□□□ -2.27
CNOT2-216ENST00000548939 A0A1B0GU33 70 aa0.83□□□□□ -2.28
CNOT2-216ENST00000548939 BRK1Q8WUW1 75 aa0.83□□□□□ -2.28
CNOT2-216ENST00000548939 C10orf95Q9H7T3 257 aa0.82□□□□□ -2.28
CNOT2-216ENST00000548939 MIR22HGQ0VDD5 57 aa0.81□□□□□ -2.28
CNOT2-216ENST00000548939 SPTSSBQ8NFR3 76 aa0.81□□□□□ -2.28
CNOT2-216ENST00000548939 UQCR11O14957 56 aa0.8□□□□□ -2.28
CNOT2-216ENST00000548939 CDC42SE1Q9NRR8 79 aa0.8□□□□□ -2.28
CNOT2-216ENST00000548939 V9GYY9 64 aa0.8□□□□□ -2.28
CNOT2-216ENST00000548939 KRTAP6-2Q3LI66 62 aa0.79□□□□□ -2.28
CNOT2-216ENST00000548939 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
CNOT2-216ENST00000548939 PRO0628Q9UI54 55 aa0.76□□□□□ -2.29
CNOT2-216ENST00000548939 PMAIP1Q13794 54 aa0.75□□□□□ -2.29
CNOT2-216ENST00000548939 KRTAP25-1Q3LHN0 102 aa0.75□□□□□ -2.29
CNOT2-216ENST00000548939 KRTAP6-1Q3LI64 71 aa0.75□□□□□ -2.29
CNOT2-216ENST00000548939 ROMO1P60602 79 aa0.74□□□□□ -2.29
CNOT2-216ENST00000548939 K7ERS5 55 aa0.72□□□□□ -2.29
CNOT2-216ENST00000548939 MT1AP04731 61 aa0.72□□□□□ -2.29
CNOT2-216ENST00000548939 KTN1-AS1Q86SY8 53 aa0.72□□□□□ -2.29
CNOT2-216ENST00000548939 TNP1P09430 55 aa0.71□□□□□ -2.3
CNOT2-216ENST00000548939 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
CNOT2-216ENST00000548939 PRM1P04553 51 aa0.43□□□□□ -2.34
CNOT2-216ENST00000548939 INE1O15225 51 aa0.4□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 36.3 ms