RNA–Protein interactions for RNA: ENST00000548749.5

RBFOX1-211, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-211ENST00000548749 GPR98Q8WXG9 6306 aa7.09□□□□□ -1.27
RBFOX1-211ENST00000548749 Q1T7F1 81 aa7.07□□□□□ -1.28
RBFOX1-211ENST00000548749 DSTQ03001 7570 aaKnown RBP7.05□□□□□ -1.28
RBFOX1-211ENST00000548749 K7ERS5 55 aa7.04□□□□□ -1.28
RBFOX1-211ENST00000548749 MT1MQ8N339 61 aa7.04□□□□□ -1.28
RBFOX1-211ENST00000548749 KRTAP12-3P60328 96 aa6.95□□□□□ -1.3
RBFOX1-211ENST00000548749 KRTAP25-1Q3LHN0 102 aa6.94□□□□□ -1.3
RBFOX1-211ENST00000548749 KRTAP4-3Q9BYR4 195 aa6.9□□□□□ -1.3
RBFOX1-211ENST00000548749 A6NED7 52 aa6.89□□□□□ -1.31
RBFOX1-211ENST00000548749 SVIPQ8NHG7 77 aa6.89□□□□□ -1.31
RBFOX1-211ENST00000548749 KRTAP4-9Q9BYQ8 210 aa6.88□□□□□ -1.31
RBFOX1-211ENST00000548749 PCP4P48539 62 aa6.81□□□□□ -1.32
RBFOX1-211ENST00000548749 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
RBFOX1-211ENST00000548749 RPS28P62857 69 aaKnown RBP6.77□□□□□ -1.33
RBFOX1-211ENST00000548749 LCE4AQ5TA78 99 aa6.74□□□□□ -1.33
RBFOX1-211ENST00000548749 LCE1DQ5T752 114 aa6.72□□□□□ -1.33
RBFOX1-211ENST00000548749 MT4P47944 62 aa6.69□□□□□ -1.34
RBFOX1-211ENST00000548749 CDC42SE1Q9NRR8 79 aa6.67□□□□□ -1.34
RBFOX1-211ENST00000548749 KRTAP23-1A1A580 65 aa6.64□□□□□ -1.35
RBFOX1-211ENST00000548749 KRTAP5-4Q6L8H1 288 aa6.62□□□□□ -1.35
RBFOX1-211ENST00000548749 ROMO1P60602 79 aa6.57□□□□□ -1.36
RBFOX1-211ENST00000548749 HMCN1Q96RW7 5635 aa6.56□□□□□ -1.36
RBFOX1-211ENST00000548749 KRTAP15-1Q3LI76 137 aa6.53□□□□□ -1.36
RBFOX1-211ENST00000548749 KRTAP19-4Q3LI73 84 aa6.5□□□□□ -1.37
RBFOX1-211ENST00000548749 KRTAP4-6Q9BYQ5 205 aa6.49□□□□□ -1.37
RBFOX1-211ENST00000548749 KRTAP5-10Q6L8G5 202 aa6.45□□□□□ -1.38
RBFOX1-211ENST00000548749 LOC100996750A0A140TA64 210 aa6.42□□□□□ -1.38
RBFOX1-211ENST00000548749 KRTAP5-5Q701N2 237 aaPredicted RBP6.42□□□□□ -1.38
RBFOX1-211ENST00000548749 AHNAK2Q8IVF2 5795 aa6.4□□□□□ -1.38
RBFOX1-211ENST00000548749 LCE3CQ5T5A8 94 aa6.4□□□□□ -1.38
RBFOX1-211ENST00000548749 KRTAP5-7Q6L8G8 165 aa6.28□□□□□ -1.4
RBFOX1-211ENST00000548749 KRTAP12-4P60329 112 aa6.26□□□□□ -1.41
RBFOX1-211ENST00000548749 KRTAP20-2Q3LI61 65 aa6.26□□□□□ -1.41
RBFOX1-211ENST00000548749 SPRR5A0A1B0GTR4 108 aa6.23□□□□□ -1.41
RBFOX1-211ENST00000548749 KRTAP5-3Q6L8H2 238 aa6.16□□□□□ -1.42
RBFOX1-211ENST00000548749 SYNE1Q8NF91 8797 aaKnown RBP6.12□□□□□ -1.43
RBFOX1-211ENST00000548749 MT1AP04731 61 aa6.04□□□□□ -1.44
RBFOX1-211ENST00000548749 KRTAP9-6A8MVA2 160 aa6.03□□□□□ -1.44
RBFOX1-211ENST00000548749 BRK1Q8WUW1 75 aa6.02□□□□□ -1.45
RBFOX1-211ENST00000548749 KRTAP6-1Q3LI64 71 aa6.01□□□□□ -1.45
RBFOX1-211ENST00000548749 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
RBFOX1-211ENST00000548749 KRTAP9-4Q9BYQ2 154 aa5.82□□□□□ -1.48
RBFOX1-211ENST00000548749 KRTAP6-2Q3LI66 62 aa5.72□□□□□ -1.49
RBFOX1-211ENST00000548749 KRTAP4-11Q9BYQ6 195 aa5.68□□□□□ -1.5
RBFOX1-211ENST00000548749 PMAIP1Q13794 54 aa5.65□□□□□ -1.5
RBFOX1-211ENST00000548749 PRO0628Q9UI54 55 aa5.55□□□□□ -1.52
RBFOX1-211ENST00000548749 MT3P25713 68 aa5.52□□□□□ -1.53
RBFOX1-211ENST00000548749 KRTAP5-8O75690 187 aa5.48□□□□□ -1.53
RBFOX1-211ENST00000548749 PRAC1Q96KF2 57 aa5.45□□□□□ -1.54
RBFOX1-211ENST00000548749 MUC5ACP98088 5654 aa5.38□□□□□ -1.55
RBFOX1-211ENST00000548749 AHNAKQ09666 5890 aaKnown RBP5.38□□□□□ -1.55
RBFOX1-211ENST00000548749 OBSCNQ5VST9 7968 aa5.37□□□□□ -1.55
RBFOX1-211ENST00000548749 MUC5BQ9HC84 5762 aaPredicted RBP5.35□□□□□ -1.55
RBFOX1-211ENST00000548749 KRTAP9-9Q9BYP9 154 aa5.2□□□□□ -1.58
RBFOX1-211ENST00000548749 KRTAP5-1Q6L8H4 278 aa5.19□□□□□ -1.58
RBFOX1-211ENST00000548749 KTN1-AS1Q86SY8 53 aa5.04□□□□□ -1.6
RBFOX1-211ENST00000548749 LCE1EQ5T753 118 aa5.01□□□□□ -1.61
RBFOX1-211ENST00000548749 LCE1BQ5T7P3 118 aa4.78□□□□□ -1.64
RBFOX1-211ENST00000548749 H3BS24 57 aa4.74□□□□□ -1.65
RBFOX1-211ENST00000548749 KRTAP4-2Q9BYR5 136 aa4.74□□□□□ -1.65
RBFOX1-211ENST00000548749 LCE1CQ5T751 118 aa4.65□□□□□ -1.67
RBFOX1-211ENST00000548749 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
RBFOX1-211ENST00000548749 LUZP6Q538Z0 58 aa4.59□□□□□ -1.67
RBFOX1-211ENST00000548749 LCE3EQ5T5B0 92 aa4.38□□□□□ -1.71
RBFOX1-211ENST00000548749 KRTAP4-12Q9BQ66 201 aa4.3□□□□□ -1.72
RBFOX1-211ENST00000548749 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
RBFOX1-211ENST00000548749 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
RBFOX1-211ENST00000548749 KRTAP5-11Q6L8G4 156 aa4.21□□□□□ -1.74
RBFOX1-211ENST00000548749 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
RBFOX1-211ENST00000548749 KRTAP21-2Q3LI59 83 aa3.94□□□□□ -1.78
RBFOX1-211ENST00000548749 NDUFAF8A1L188 74 aa3.92□□□□□ -1.78
RBFOX1-211ENST00000548749 PHGR1C9JFL3 82 aa3.76□□□□□ -1.81
RBFOX1-211ENST00000548749 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
RBFOX1-211ENST00000548749 INE1O15225 51 aa3.56□□□□□ -1.84
RBFOX1-211ENST00000548749 PRM1P04553 51 aa3.37□□□□□ -1.87
RBFOX1-211ENST00000548749 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
RBFOX1-211ENST00000548749 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
RBFOX1-211ENST00000548749 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 126.6 ms