RNA–Protein interactions for RNA: ENST00000548422.1

CDK17-204, Transcript of cyclin dependent kinase 17, humanhuman

TSL 3

Gene CDK17, Length 892 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK17-204ENST00000548422 KRTAP10-5P60370 271 aa3.79□□□□□ -1.8
CDK17-204ENST00000548422 KRTAP9-6A8MVA2 160 aa3.76□□□□□ -1.81
CDK17-204ENST00000548422 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
CDK17-204ENST00000548422 KRTAP5-2Q701N4 177 aa3.73□□□□□ -1.81
CDK17-204ENST00000548422 SYNE2Q8WXH0 6885 aaKnown RBP3.71□□□□□ -1.82
CDK17-204ENST00000548422 MACF1Q9UPN3 7388 aaKnown RBP3.68□□□□□ -1.82
CDK17-204ENST00000548422 C9orf92A6NGG3 77 aa3.68□□□□□ -1.82
CDK17-204ENST00000548422 TNP1P09430 55 aa3.67□□□□□ -1.82
CDK17-204ENST00000548422 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
CDK17-204ENST00000548422 MUC17Q685J3 4493 aa3.66□□□□□ -1.82
CDK17-204ENST00000548422 MT1HP80294 61 aa3.64□□□□□ -1.83
CDK17-204ENST00000548422 M0R2T5 61 aa3.62□□□□□ -1.83
CDK17-204ENST00000548422 SSPOA2VEC9 5147 aa3.61□□□□□ -1.83
CDK17-204ENST00000548422 KRTAP4-1Q9BYQ7 146 aa3.59□□□□□ -1.83
CDK17-204ENST00000548422 FCGBPQ9Y6R7 5405 aaPredicted RBP3.56□□□□□ -1.84
CDK17-204ENST00000548422 USH2AO75445 5202 aa3.55□□□□□ -1.84
CDK17-204ENST00000548422 KRTAP19-2Q3LHN2 52 aa3.54□□□□□ -1.84
CDK17-204ENST00000548422 KRTAP6-3Q3LI67 103 aa3.52□□□□□ -1.85
CDK17-204ENST00000548422 NEBP20929 6669 aa3.52□□□□□ -1.85
CDK17-204ENST00000548422 KRTAP20-1Q3LI63 56 aa3.47□□□□□ -1.85
CDK17-204ENST00000548422 KRTAP10-10P60014 251 aa3.44□□□□□ -1.86
CDK17-204ENST00000548422 KRTAP19-6Q3LI70 58 aa3.35□□□□□ -1.87
CDK17-204ENST00000548422 FLGP20930 4061 aaPredicted RBP3.34□□□□□ -1.87
CDK17-204ENST00000548422 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
CDK17-204ENST00000548422 KRTAP8-1Q8IUC2 63 aa3.33□□□□□ -1.88
CDK17-204ENST00000548422 KRTAP2-3P0C7H8 128 aa3.28□□□□□ -1.88
CDK17-204ENST00000548422 KRTAP2-4Q9BYR9 128 aa3.28□□□□□ -1.88
CDK17-204ENST00000548422 MT2AP02795 61 aa3.27□□□□□ -1.89
CDK17-204ENST00000548422 MUC12Q9UKN1 5478 aa3.26□□□□□ -1.89
CDK17-204ENST00000548422 MT1FP04733 61 aa3.23□□□□□ -1.89
CDK17-204ENST00000548422 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
CDK17-204ENST00000548422 KMT2DO14686 5537 aa3.18□□□□□ -1.9
CDK17-204ENST00000548422 LCE3AQ5TA76 89 aa3.17□□□□□ -1.9
CDK17-204ENST00000548422 KRTAP2-1Q9BYU5 128 aa3.14□□□□□ -1.91
CDK17-204ENST00000548422 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
CDK17-204ENST00000548422 MDN1Q9NU22 5596 aa3.1□□□□□ -1.91
CDK17-204ENST00000548422 KRTAP12-3P60328 96 aa3.09□□□□□ -1.91
CDK17-204ENST00000548422 SPRR2GQ9BYE4 73 aa3.02□□□□□ -1.93
CDK17-204ENST00000548422 SPRR2EP22531 72 aa3.01□□□□□ -1.93
CDK17-204ENST00000548422 SPRR2BP35325 72 aa3.01□□□□□ -1.93
CDK17-204ENST00000548422 SPRR2AP35326 72 aa3.01□□□□□ -1.93
CDK17-204ENST00000548422 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
CDK17-204ENST00000548422 SPRR2FQ96RM1 72 aa2.94□□□□□ -1.94
CDK17-204ENST00000548422 SPRR2DP22532 72 aa2.92□□□□□ -1.94
CDK17-204ENST00000548422 DSTQ03001 7570 aaKnown RBP2.88□□□□□ -1.95
CDK17-204ENST00000548422 MT1BP07438 61 aa2.84□□□□□ -1.95
CDK17-204ENST00000548422 KRTAP19-8Q3LI54 63 aa2.81□□□□□ -1.96
CDK17-204ENST00000548422 KRTAP19-5Q3LI72 72 aa2.8□□□□□ -1.96
CDK17-204ENST00000548422 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
CDK17-204ENST00000548422 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
CDK17-204ENST00000548422 KRTAP12-4P60329 112 aa2.78□□□□□ -1.96
CDK17-204ENST00000548422 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
CDK17-204ENST00000548422 AHNAK2Q8IVF2 5795 aa2.71□□□□□ -1.98
CDK17-204ENST00000548422 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
CDK17-204ENST00000548422 MT1XP80297 61 aa2.69□□□□□ -1.98
CDK17-204ENST00000548422 KRTAP5-7Q6L8G8 165 aa2.69□□□□□ -1.98
CDK17-204ENST00000548422 HMCN1Q96RW7 5635 aa2.67□□□□□ -1.98
CDK17-204ENST00000548422 MT1AP04731 61 aa2.6□□□□□ -1.99
CDK17-204ENST00000548422 MT1EP04732 61 aa2.58□□□□□ -2
CDK17-204ENST00000548422 MT4P47944 62 aa2.56□□□□□ -2
CDK17-204ENST00000548422 MT1LQ93083 61 aa2.52□□□□□ -2.01
CDK17-204ENST00000548422 PRM1P04553 51 aa2.49□□□□□ -2.01
CDK17-204ENST00000548422 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
CDK17-204ENST00000548422 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
CDK17-204ENST00000548422 KRTAP19-7Q3SYF9 63 aa2.4□□□□□ -2.03
CDK17-204ENST00000548422 KRTAP19-3Q7Z4W3 81 aa2.4□□□□□ -2.03
CDK17-204ENST00000548422 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
CDK17-204ENST00000548422 MT1GP13640 62 aa2.34□□□□□ -2.03
CDK17-204ENST00000548422 KRTAP20-2Q3LI61 65 aa2.3□□□□□ -2.04
CDK17-204ENST00000548422 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
CDK17-204ENST00000548422 MT1MQ8N339 61 aa2.23□□□□□ -2.05
CDK17-204ENST00000548422 SYNE1Q8NF91 8797 aaKnown RBP2.23□□□□□ -2.05
CDK17-204ENST00000548422 KRTAP6-2Q3LI66 62 aa2.22□□□□□ -2.05
CDK17-204ENST00000548422 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
CDK17-204ENST00000548422 KRTAP6-1Q3LI64 71 aa1.96□□□□□ -2.1
CDK17-204ENST00000548422 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
CDK17-204ENST00000548422 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
CDK17-204ENST00000548422 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 40.7 ms