RNA–Protein interactions for RNA: ENST00000548220.1

PTPRR-207, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,374 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-207ENST00000548220 KRTAP10-12P60413 245 aa2.7□□□□□ -1.98
PTPRR-207ENST00000548220 ROMO1P60602 79 aa2.7□□□□□ -1.98
PTPRR-207ENST00000548220 MT1BP07438 61 aa2.69□□□□□ -1.98
PTPRR-207ENST00000548220 KRTAP12-1P59990 96 aa2.69□□□□□ -1.98
PTPRR-207ENST00000548220 LINC01554Q52M75 96 aa2.69□□□□□ -1.98
PTPRR-207ENST00000548220 KRTAP12-2P59991 146 aa2.68□□□□□ -1.98
PTPRR-207ENST00000548220 KRTAP25-1Q3LHN0 102 aa2.68□□□□□ -1.98
PTPRR-207ENST00000548220 SPINT4Q6UDR6 99 aa2.68□□□□□ -1.98
PTPRR-207ENST00000548220 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
PTPRR-207ENST00000548220 KRTAP19-6Q3LI70 58 aa2.67□□□□□ -1.98
PTPRR-207ENST00000548220 PRO2289Q9P1D8 64 aa2.66□□□□□ -1.98
PTPRR-207ENST00000548220 FCGBPQ9Y6R7 5405 aaPredicted RBP2.65□□□□□ -1.99
PTPRR-207ENST00000548220 KRTAP4-3Q9BYR4 195 aa2.62□□□□□ -1.99
PTPRR-207ENST00000548220 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
PTPRR-207ENST00000548220 KRTAP5-2Q701N4 177 aa2.61□□□□□ -1.99
PTPRR-207ENST00000548220 CAMK2N1Q7Z7J9 78 aa2.61□□□□□ -1.99
PTPRR-207ENST00000548220 MT1XP80297 61 aa2.59□□□□□ -2
PTPRR-207ENST00000548220 C10orf95Q9H7T3 257 aa2.56□□□□□ -2
PTPRR-207ENST00000548220 SYNE2Q8WXH0 6885 aaKnown RBP2.56□□□□□ -2
PTPRR-207ENST00000548220 MACF1Q9UPN3 7388 aaKnown RBP2.5□□□□□ -2.01
PTPRR-207ENST00000548220 TNP1P09430 55 aa2.49□□□□□ -2.01
PTPRR-207ENST00000548220 LUZP6Q538Z0 58 aa2.49□□□□□ -2.01
PTPRR-207ENST00000548220 LCE3CQ5T5A8 94 aa2.49□□□□□ -2.01
PTPRR-207ENST00000548220 PP632Q6XCG6 107 aa2.46□□□□□ -2.02
PTPRR-207ENST00000548220 KRTAP6-3Q3LI67 103 aa2.42□□□□□ -2.02
PTPRR-207ENST00000548220 LCE3AQ5TA76 89 aa2.41□□□□□ -2.02
PTPRR-207ENST00000548220 KMT2DO14686 5537 aa2.41□□□□□ -2.02
PTPRR-207ENST00000548220 NEBP20929 6669 aa2.39□□□□□ -2.03
PTPRR-207ENST00000548220 KRTAP8-1Q8IUC2 63 aa2.37□□□□□ -2.03
PTPRR-207ENST00000548220 MUC12Q9UKN1 5478 aa2.36□□□□□ -2.03
PTPRR-207ENST00000548220 KRTAP20-1Q3LI63 56 aa2.34□□□□□ -2.04
PTPRR-207ENST00000548220 MDN1Q9NU22 5596 aa2.31□□□□□ -2.04
PTPRR-207ENST00000548220 KRTAP19-7Q3SYF9 63 aa2.31□□□□□ -2.04
PTPRR-207ENST00000548220 KRTAP12-3P60328 96 aa2.3□□□□□ -2.04
PTPRR-207ENST00000548220 SPRR2FQ96RM1 72 aa2.3□□□□□ -2.04
PTPRR-207ENST00000548220 KRTAP19-5Q3LI72 72 aa2.28□□□□□ -2.04
PTPRR-207ENST00000548220 MT1EP04732 61 aa2.27□□□□□ -2.05
PTPRR-207ENST00000548220 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
PTPRR-207ENST00000548220 MT1GP13640 62 aa2.25□□□□□ -2.05
PTPRR-207ENST00000548220 SPRR5A0A1B0GTR4 108 aa2.24□□□□□ -2.05
PTPRR-207ENST00000548220 SPRR2EP22531 72 aa2.24□□□□□ -2.05
PTPRR-207ENST00000548220 SPRR2BP35325 72 aa2.24□□□□□ -2.05
PTPRR-207ENST00000548220 SPRR2AP35326 72 aa2.24□□□□□ -2.05
PTPRR-207ENST00000548220 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
PTPRR-207ENST00000548220 KRTAP19-3Q7Z4W3 81 aa2.23□□□□□ -2.05
PTPRR-207ENST00000548220 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
PTPRR-207ENST00000548220 MT1LQ93083 61 aa2.21□□□□□ -2.06
PTPRR-207ENST00000548220 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
PTPRR-207ENST00000548220 KRTAP2-3P0C7H8 128 aa2.16□□□□□ -2.06
PTPRR-207ENST00000548220 SPRR2DP22532 72 aa2.16□□□□□ -2.06
PTPRR-207ENST00000548220 KRTAP2-4Q9BYR9 128 aa2.16□□□□□ -2.06
PTPRR-207ENST00000548220 MT1MQ8N339 61 aa2.15□□□□□ -2.07
PTPRR-207ENST00000548220 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
PTPRR-207ENST00000548220 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
PTPRR-207ENST00000548220 KRTAP2-1Q9BYU5 128 aa2.1□□□□□ -2.07
PTPRR-207ENST00000548220 DSTQ03001 7570 aaKnown RBP2.05□□□□□ -2.08
PTPRR-207ENST00000548220 INE1O15225 51 aa1.96□□□□□ -2.1
PTPRR-207ENST00000548220 AHNAK2Q8IVF2 5795 aa1.92□□□□□ -2.1
PTPRR-207ENST00000548220 MT4P47944 62 aa1.92□□□□□ -2.1
PTPRR-207ENST00000548220 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
PTPRR-207ENST00000548220 MT1AP04731 61 aa1.9□□□□□ -2.11
PTPRR-207ENST00000548220 KRTAP12-4P60329 112 aa1.9□□□□□ -2.11
PTPRR-207ENST00000548220 HMCN1Q96RW7 5635 aa1.9□□□□□ -2.11
PTPRR-207ENST00000548220 SYNE1Q8NF91 8797 aaKnown RBP1.84□□□□□ -2.11
PTPRR-207ENST00000548220 KRTAP6-1Q3LI64 71 aa1.84□□□□□ -2.12
PTPRR-207ENST00000548220 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
PTPRR-207ENST00000548220 KRTAP20-2Q3LI61 65 aa1.81□□□□□ -2.12
PTPRR-207ENST00000548220 KRTAP5-7Q6L8G8 165 aa1.78□□□□□ -2.12
PTPRR-207ENST00000548220 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
PTPRR-207ENST00000548220 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
PTPRR-207ENST00000548220 KRTAP6-2Q3LI66 62 aa1.72□□□□□ -2.13
PTPRR-207ENST00000548220 MUC5BQ9HC84 5762 aaPredicted RBP1.64□□□□□ -2.15
PTPRR-207ENST00000548220 MUC5ACP98088 5654 aa1.62□□□□□ -2.15
PTPRR-207ENST00000548220 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
PTPRR-207ENST00000548220 PRM1P04553 51 aa1.42□□□□□ -2.18
PTPRR-207ENST00000548220 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
PTPRR-207ENST00000548220 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
PTPRR-207ENST00000548220 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 239.9 ms