RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 KRTAP4-7Q9BYR0 210 aa4.26□□□□□ -1.73
GCN1-204ENST00000548132 TNP1P09430 55 aa4.25□□□□□ -1.73
GCN1-204ENST00000548132 KRTAP4-6Q9BYQ5 205 aa4.24□□□□□ -1.73
GCN1-204ENST00000548132 CCDC179H3BU77 68 aa4.23□□□□□ -1.73
GCN1-204ENST00000548132 ANAPC13Q9BS18 74 aa4.22□□□□□ -1.73
GCN1-204ENST00000548132 KRTAP5-10Q6L8G5 202 aa4.21□□□□□ -1.74
GCN1-204ENST00000548132 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
GCN1-204ENST00000548132 KRTAP5-5Q701N2 237 aaPredicted RBP4.16□□□□□ -1.74
GCN1-204ENST00000548132 LINC01558Q9Y6Z2 57 aa4.15□□□□□ -1.75
GCN1-204ENST00000548132 ATP5EP56381 51 aaPredicted RBP4.14□□□□□ -1.75
GCN1-204ENST00000548132 PRR15LQ9BU68 103 aa4.1□□□□□ -1.75
GCN1-204ENST00000548132 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
GCN1-204ENST00000548132 KRTAP5-3Q6L8H2 238 aa4.06□□□□□ -1.76
GCN1-204ENST00000548132 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
GCN1-204ENST00000548132 KRTAP5-7Q6L8G8 165 aa4.03□□□□□ -1.76
GCN1-204ENST00000548132 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
GCN1-204ENST00000548132 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
GCN1-204ENST00000548132 UQCR11O14957 56 aa4.01□□□□□ -1.77
GCN1-204ENST00000548132 TMEM258P61165 79 aa4□□□□□ -1.77
GCN1-204ENST00000548132 KRTAP25-1Q3LHN0 102 aa3.98□□□□□ -1.77
GCN1-204ENST00000548132 MIR22HGQ0VDD5 57 aa3.93□□□□□ -1.78
GCN1-204ENST00000548132 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
GCN1-204ENST00000548132 KRTAP15-1Q3LI76 137 aa3.84□□□□□ -1.79
GCN1-204ENST00000548132 KRTAP19-4Q3LI73 84 aa3.83□□□□□ -1.8
GCN1-204ENST00000548132 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
GCN1-204ENST00000548132 KRTAP23-1A1A580 65 aa3.82□□□□□ -1.8
GCN1-204ENST00000548132 PSPHP1O15172 72 aa3.82□□□□□ -1.8
GCN1-204ENST00000548132 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
GCN1-204ENST00000548132 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
GCN1-204ENST00000548132 MT1AP04731 61 aa3.77□□□□□ -1.81
GCN1-204ENST00000548132 Q1T7F1 81 aa3.77□□□□□ -1.81
GCN1-204ENST00000548132 K7ERS5 55 aa3.76□□□□□ -1.81
GCN1-204ENST00000548132 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
GCN1-204ENST00000548132 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.82
GCN1-204ENST00000548132 V9GYY9 64 aa3.71□□□□□ -1.82
GCN1-204ENST00000548132 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
GCN1-204ENST00000548132 A6NED7 52 aa3.63□□□□□ -1.83
GCN1-204ENST00000548132 CDC42SE1Q9NRR8 79 aa3.63□□□□□ -1.83
GCN1-204ENST00000548132 KRTAP9-4Q9BYQ2 154 aa3.62□□□□□ -1.83
GCN1-204ENST00000548132 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
GCN1-204ENST00000548132 ROMO1P60602 79 aa3.59□□□□□ -1.83
GCN1-204ENST00000548132 MUC5ACP98088 5654 aa3.59□□□□□ -1.84
GCN1-204ENST00000548132 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.84
GCN1-204ENST00000548132 AHNAKQ09666 5890 aaKnown RBP3.57□□□□□ -1.84
GCN1-204ENST00000548132 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
GCN1-204ENST00000548132 PCP4P48539 62 aa3.5□□□□□ -1.85
GCN1-204ENST00000548132 RPS28P62857 69 aaKnown RBP3.5□□□□□ -1.85
GCN1-204ENST00000548132 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
GCN1-204ENST00000548132 SVIPQ8NHG7 77 aa3.39□□□□□ -1.87
GCN1-204ENST00000548132 MT3P25713 68 aa3.38□□□□□ -1.87
GCN1-204ENST00000548132 KRTAP9-9Q9BYP9 154 aa3.36□□□□□ -1.87
GCN1-204ENST00000548132 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
GCN1-204ENST00000548132 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
GCN1-204ENST00000548132 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
GCN1-204ENST00000548132 BRK1Q8WUW1 75 aa2.96□□□□□ -1.94
GCN1-204ENST00000548132 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
GCN1-204ENST00000548132 PRAC1Q96KF2 57 aa2.81□□□□□ -1.96
GCN1-204ENST00000548132 PRO0628Q9UI54 55 aa2.8□□□□□ -1.96
GCN1-204ENST00000548132 KRTAP4-12Q9BQ66 201 aa2.77□□□□□ -1.97
GCN1-204ENST00000548132 PMAIP1Q13794 54 aa2.74□□□□□ -1.97
GCN1-204ENST00000548132 KRTAP5-11Q6L8G4 156 aa2.72□□□□□ -1.97
GCN1-204ENST00000548132 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
GCN1-204ENST00000548132 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
GCN1-204ENST00000548132 KTN1-AS1Q86SY8 53 aa2.61□□□□□ -1.99
GCN1-204ENST00000548132 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
GCN1-204ENST00000548132 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
GCN1-204ENST00000548132 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
GCN1-204ENST00000548132 H3BS24 57 aa2.42□□□□□ -2.02
GCN1-204ENST00000548132 A0A0A0MQY5 61 aa2.41□□□□□ -2.02
GCN1-204ENST00000548132 PHGR1C9JFL3 82 aa2.4□□□□□ -2.03
GCN1-204ENST00000548132 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
GCN1-204ENST00000548132 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
GCN1-204ENST00000548132 LUZP6Q538Z0 58 aa2.19□□□□□ -2.06
GCN1-204ENST00000548132 NDUFAF8A1L188 74 aa2.02□□□□□ -2.09
GCN1-204ENST00000548132 PRM1P04553 51 aa1.87□□□□□ -2.11
GCN1-204ENST00000548132 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
GCN1-204ENST00000548132 INE1O15225 51 aa1.67□□□□□ -2.14
GCN1-204ENST00000548132 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 82.5 ms