RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 KRTAP9-6A0A140TA67 174 aa4.1□□□□□ -1.75
RNF41-203ENST00000547967 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
RNF41-203ENST00000547967 CRCT1Q9UGL9 99 aa4.08□□□□□ -1.76
RNF41-203ENST00000547967 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
RNF41-203ENST00000547967 SPRR2FQ96RM1 72 aa4.05□□□□□ -1.76
RNF41-203ENST00000547967 DSTQ03001 7570 aaKnown RBP4□□□□□ -1.77
RNF41-203ENST00000547967 KRTAP19-3Q7Z4W3 81 aa4□□□□□ -1.77
RNF41-203ENST00000547967 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
RNF41-203ENST00000547967 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
RNF41-203ENST00000547967 MDN1Q9NU22 5596 aa3.96□□□□□ -1.78
RNF41-203ENST00000547967 MT1GP13640 62 aa3.96□□□□□ -1.78
RNF41-203ENST00000547967 MT1MQ8N339 61 aa3.95□□□□□ -1.78
RNF41-203ENST00000547967 LOC100996750A0A140TA64 210 aa3.91□□□□□ -1.78
RNF41-203ENST00000547967 LCE5AQ5TCM9 118 aa3.9□□□□□ -1.79
RNF41-203ENST00000547967 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
RNF41-203ENST00000547967 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
RNF41-203ENST00000547967 SPRR2EP22531 72 aa3.77□□□□□ -1.81
RNF41-203ENST00000547967 SPRR2BP35325 72 aa3.77□□□□□ -1.81
RNF41-203ENST00000547967 SPRR2AP35326 72 aa3.77□□□□□ -1.81
RNF41-203ENST00000547967 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.76□□□□□ -1.81
RNF41-203ENST00000547967 KRTAP2-3P0C7H8 128 aa3.74□□□□□ -1.81
RNF41-203ENST00000547967 KRTAP2-4Q9BYR9 128 aa3.74□□□□□ -1.81
RNF41-203ENST00000547967 KRTAP2-1Q9BYU5 128 aa3.74□□□□□ -1.81
RNF41-203ENST00000547967 KRTAP6-3Q3LI67 103 aa3.67□□□□□ -1.82
RNF41-203ENST00000547967 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
RNF41-203ENST00000547967 SPRR2DP22532 72 aa3.61□□□□□ -1.83
RNF41-203ENST00000547967 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
RNF41-203ENST00000547967 INE1O15225 51 aa3.57□□□□□ -1.84
RNF41-203ENST00000547967 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
RNF41-203ENST00000547967 LCE3BQ5TA77 95 aa3.52□□□□□ -1.85
RNF41-203ENST00000547967 KRTAP9-7A8MTY7 169 aa3.5□□□□□ -1.85
RNF41-203ENST00000547967 KRTAP5-5Q701N2 237 aaPredicted RBP3.5□□□□□ -1.85
RNF41-203ENST00000547967 MT1AP04731 61 aa3.48□□□□□ -1.85
RNF41-203ENST00000547967 NEBP20929 6669 aa3.45□□□□□ -1.86
RNF41-203ENST00000547967 KRTAP4-9Q9BYQ8 210 aa3.4□□□□□ -1.86
RNF41-203ENST00000547967 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
RNF41-203ENST00000547967 KRTAP9-4Q9BYQ2 154 aa3.31□□□□□ -1.88
RNF41-203ENST00000547967 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
RNF41-203ENST00000547967 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
RNF41-203ENST00000547967 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
RNF41-203ENST00000547967 MT4P47944 62 aa3.21□□□□□ -1.9
RNF41-203ENST00000547967 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
RNF41-203ENST00000547967 KRTAP4-6Q9BYQ5 205 aa3.19□□□□□ -1.9
RNF41-203ENST00000547967 MT3P25713 68 aa3.16□□□□□ -1.9
RNF41-203ENST00000547967 KRTAP2-2Q9BYT5 123 aa3.13□□□□□ -1.91
RNF41-203ENST00000547967 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
RNF41-203ENST00000547967 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
RNF41-203ENST00000547967 KRTAP20-1Q3LI63 56 aa3.11□□□□□ -1.91
RNF41-203ENST00000547967 LCE4AQ5TA78 99 aa3.11□□□□□ -1.91
RNF41-203ENST00000547967 GPR98Q8WXG9 6306 aa3.08□□□□□ -1.92
RNF41-203ENST00000547967 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
RNF41-203ENST00000547967 LCE1DQ5T752 114 aa3.06□□□□□ -1.92
RNF41-203ENST00000547967 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
RNF41-203ENST00000547967 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.94
RNF41-203ENST00000547967 KRTAP5-3Q6L8H2 238 aa2.92□□□□□ -1.94
RNF41-203ENST00000547967 PRM1P04553 51 aa2.86□□□□□ -1.95
RNF41-203ENST00000547967 KRTAP9-9Q9BYP9 154 aa2.8□□□□□ -1.96
RNF41-203ENST00000547967 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
RNF41-203ENST00000547967 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
RNF41-203ENST00000547967 LCE1EQ5T753 118 aa2.64□□□□□ -1.99
RNF41-203ENST00000547967 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
RNF41-203ENST00000547967 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
RNF41-203ENST00000547967 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
RNF41-203ENST00000547967 AHNAK2Q8IVF2 5795 aa2.58□□□□□ -2
RNF41-203ENST00000547967 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
RNF41-203ENST00000547967 KRTAP4-2Q9BYR5 136 aa2.52□□□□□ -2.01
RNF41-203ENST00000547967 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
RNF41-203ENST00000547967 KRTAP5-10Q6L8G5 202 aa2.51□□□□□ -2.01
RNF41-203ENST00000547967 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
RNF41-203ENST00000547967 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
RNF41-203ENST00000547967 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
RNF41-203ENST00000547967 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
RNF41-203ENST00000547967 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
RNF41-203ENST00000547967 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
RNF41-203ENST00000547967 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
RNF41-203ENST00000547967 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
RNF41-203ENST00000547967 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
RNF41-203ENST00000547967 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 119.8 ms