RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 K7ERS5 55 aa6.72□□□□□ -1.33
PRPF40B-206ENST00000547764 MT1GP13640 62 aa6.72□□□□□ -1.33
PRPF40B-206ENST00000547764 RPS28P62857 69 aaKnown RBP6.69□□□□□ -1.34
PRPF40B-206ENST00000547764 MT1LQ93083 61 aa6.68□□□□□ -1.34
PRPF40B-206ENST00000547764 A6NED7 52 aa6.65□□□□□ -1.34
PRPF40B-206ENST00000547764 PP632Q6XCG6 107 aa6.65□□□□□ -1.34
PRPF40B-206ENST00000547764 KRTAP25-1Q3LHN0 102 aa6.62□□□□□ -1.35
PRPF40B-206ENST00000547764 MT1MQ8N339 61 aa6.61□□□□□ -1.35
PRPF40B-206ENST00000547764 GPR98Q8WXG9 6306 aa6.61□□□□□ -1.35
PRPF40B-206ENST00000547764 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
PRPF40B-206ENST00000547764 KRTAP4-3Q9BYR4 195 aa6.47□□□□□ -1.37
PRPF40B-206ENST00000547764 CDC42SE1Q9NRR8 79 aa6.4□□□□□ -1.38
PRPF40B-206ENST00000547764 KRTAP23-1A1A580 65 aa6.38□□□□□ -1.39
PRPF40B-206ENST00000547764 KRTAP4-7Q9BYR0 210 aa6.38□□□□□ -1.39
PRPF40B-206ENST00000547764 KRTAP4-9Q9BYQ8 210 aa6.35□□□□□ -1.39
PRPF40B-206ENST00000547764 ROMO1P60602 79 aa6.32□□□□□ -1.4
PRPF40B-206ENST00000547764 LCE4AQ5TA78 99 aa6.26□□□□□ -1.41
PRPF40B-206ENST00000547764 LCE1DQ5T752 114 aa6.22□□□□□ -1.41
PRPF40B-206ENST00000547764 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.42
PRPF40B-206ENST00000547764 KRTAP19-4Q3LI73 84 aa6.19□□□□□ -1.42
PRPF40B-206ENST00000547764 KRTAP5-4Q6L8H1 288 aa6.19□□□□□ -1.42
PRPF40B-206ENST00000547764 MT4P47944 62 aa6.18□□□□□ -1.42
PRPF40B-206ENST00000547764 HMCN1Q96RW7 5635 aa6.12□□□□□ -1.43
PRPF40B-206ENST00000547764 LCE3CQ5T5A8 94 aa6.07□□□□□ -1.44
PRPF40B-206ENST00000547764 KRTAP5-5Q701N2 237 aaPredicted RBP6.05□□□□□ -1.44
PRPF40B-206ENST00000547764 LOC100996750A0A140TA64 210 aa6.04□□□□□ -1.44
PRPF40B-206ENST00000547764 KRTAP4-6Q9BYQ5 205 aa6.04□□□□□ -1.44
PRPF40B-206ENST00000547764 BRK1Q8WUW1 75 aa5.89□□□□□ -1.47
PRPF40B-206ENST00000547764 AHNAK2Q8IVF2 5795 aa5.85□□□□□ -1.47
PRPF40B-206ENST00000547764 SYNE1Q8NF91 8797 aaKnown RBP5.84□□□□□ -1.47
PRPF40B-206ENST00000547764 KRTAP12-4P60329 112 aa5.83□□□□□ -1.48
PRPF40B-206ENST00000547764 KRTAP20-2Q3LI61 65 aa5.83□□□□□ -1.48
PRPF40B-206ENST00000547764 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
PRPF40B-206ENST00000547764 KRTAP9-6A8MVA2 160 aa5.74□□□□□ -1.49
PRPF40B-206ENST00000547764 MT1AP04731 61 aa5.68□□□□□ -1.5
PRPF40B-206ENST00000547764 KRTAP5-10Q6L8G5 202 aa5.68□□□□□ -1.5
PRPF40B-206ENST00000547764 KRTAP5-3Q6L8H2 238 aa5.66□□□□□ -1.5
PRPF40B-206ENST00000547764 KRTAP6-1Q3LI64 71 aa5.65□□□□□ -1.5
PRPF40B-206ENST00000547764 PMAIP1Q13794 54 aa5.55□□□□□ -1.52
PRPF40B-206ENST00000547764 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
PRPF40B-206ENST00000547764 KRTAP5-7Q6L8G8 165 aa5.47□□□□□ -1.53
PRPF40B-206ENST00000547764 KRTAP5-2Q701N4 177 aa5.46□□□□□ -1.54
PRPF40B-206ENST00000547764 KRTAP6-2Q3LI66 62 aa5.36□□□□□ -1.55
PRPF40B-206ENST00000547764 PRAC1Q96KF2 57 aa5.33□□□□□ -1.56
PRPF40B-206ENST00000547764 KRTAP4-11Q9BYQ6 195 aa5.28□□□□□ -1.56
PRPF40B-206ENST00000547764 PRO0628Q9UI54 55 aa5.25□□□□□ -1.57
PRPF40B-206ENST00000547764 MT3P25713 68 aa5.19□□□□□ -1.58
PRPF40B-206ENST00000547764 OBSCNQ5VST9 7968 aa5.14□□□□□ -1.59
PRPF40B-206ENST00000547764 KRTAP5-8O75690 187 aa5.1□□□□□ -1.59
PRPF40B-206ENST00000547764 SVIPQ8NHG7 77 aa5.08□□□□□ -1.6
PRPF40B-206ENST00000547764 AHNAKQ09666 5890 aaKnown RBP5.02□□□□□ -1.61
PRPF40B-206ENST00000547764 KTN1-AS1Q86SY8 53 aa4.99□□□□□ -1.61
PRPF40B-206ENST00000547764 MUC5ACP98088 5654 aa4.86□□□□□ -1.63
PRPF40B-206ENST00000547764 KRTAP5-1Q6L8H4 278 aa4.86□□□□□ -1.63
PRPF40B-206ENST00000547764 KRTAP9-9Q9BYP9 154 aa4.79□□□□□ -1.64
PRPF40B-206ENST00000547764 MUC5BQ9HC84 5762 aaPredicted RBP4.78□□□□□ -1.64
PRPF40B-206ENST00000547764 LCE1EQ5T753 118 aa4.72□□□□□ -1.65
PRPF40B-206ENST00000547764 H3BS24 57 aa4.67□□□□□ -1.66
PRPF40B-206ENST00000547764 LUZP6Q538Z0 58 aa4.45□□□□□ -1.7
PRPF40B-206ENST00000547764 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
PRPF40B-206ENST00000547764 LCE1BQ5T7P3 118 aa4.44□□□□□ -1.7
PRPF40B-206ENST00000547764 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
PRPF40B-206ENST00000547764 LCE1CQ5T751 118 aa4.38□□□□□ -1.71
PRPF40B-206ENST00000547764 LCE3EQ5T5B0 92 aa4.18□□□□□ -1.74
PRPF40B-206ENST00000547764 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
PRPF40B-206ENST00000547764 A0A0A0MQY5 61 aa3.99□□□□□ -1.77
PRPF40B-206ENST00000547764 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
PRPF40B-206ENST00000547764 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
PRPF40B-206ENST00000547764 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
PRPF40B-206ENST00000547764 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
PRPF40B-206ENST00000547764 NDUFAF8A1L188 74 aa3.71□□□□□ -1.82
PRPF40B-206ENST00000547764 PHGR1C9JFL3 82 aa3.41□□□□□ -1.86
PRPF40B-206ENST00000547764 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
PRPF40B-206ENST00000547764 PRM1P04553 51 aa3.24□□□□□ -1.89
PRPF40B-206ENST00000547764 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
PRPF40B-206ENST00000547764 INE1O15225 51 aa2.98□□□□□ -1.93
PRPF40B-206ENST00000547764 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
PRPF40B-206ENST00000547764 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms