RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 H3BS24 57 aa3.92□□□□□ -1.78
GCN1-202ENST00000547263 PSPHP1O15172 72 aa3.92□□□□□ -1.78
GCN1-202ENST00000547263 RPS28P62857 69 aaKnown RBP3.92□□□□□ -1.78
GCN1-202ENST00000547263 MT1LQ93083 61 aa3.92□□□□□ -1.78
GCN1-202ENST00000547263 MT1MQ8N339 61 aa3.87□□□□□ -1.79
GCN1-202ENST00000547263 KRTAP25-1Q3LHN0 102 aa3.85□□□□□ -1.79
GCN1-202ENST00000547263 PP632Q6XCG6 107 aa3.85□□□□□ -1.79
GCN1-202ENST00000547263 KRTAP12-3P60328 96 aa3.82□□□□□ -1.8
GCN1-202ENST00000547263 K7ERS5 55 aa3.81□□□□□ -1.8
GCN1-202ENST00000547263 DSTQ03001 7570 aaKnown RBP3.79□□□□□ -1.8
GCN1-202ENST00000547263 KRTAP23-1A1A580 65 aa3.78□□□□□ -1.8
GCN1-202ENST00000547263 A6NED7 52 aa3.78□□□□□ -1.8
GCN1-202ENST00000547263 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
GCN1-202ENST00000547263 KRTAP19-4Q3LI73 84 aa3.7□□□□□ -1.82
GCN1-202ENST00000547263 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
GCN1-202ENST00000547263 CDC42SE1Q9NRR8 79 aa3.7□□□□□ -1.82
GCN1-202ENST00000547263 KRTAP4-7Q9BYR0 210 aa3.69□□□□□ -1.82
GCN1-202ENST00000547263 LCE4AQ5TA78 99 aa3.68□□□□□ -1.82
GCN1-202ENST00000547263 KRTAP4-9Q9BYQ8 210 aa3.65□□□□□ -1.83
GCN1-202ENST00000547263 ROMO1P60602 79 aa3.64□□□□□ -1.83
GCN1-202ENST00000547263 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
GCN1-202ENST00000547263 LCE1DQ5T752 114 aa3.63□□□□□ -1.83
GCN1-202ENST00000547263 KRTAP15-1Q3LI76 137 aa3.61□□□□□ -1.83
GCN1-202ENST00000547263 KRTAP5-5Q701N2 237 aaPredicted RBP3.61□□□□□ -1.83
GCN1-202ENST00000547263 MT4P47944 62 aa3.54□□□□□ -1.84
GCN1-202ENST00000547263 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
GCN1-202ENST00000547263 KRTAP4-6Q9BYQ5 205 aa3.52□□□□□ -1.85
GCN1-202ENST00000547263 LOC100996750A0A140TA64 210 aa3.48□□□□□ -1.85
GCN1-202ENST00000547263 SPRR5A0A1B0GTR4 108 aa3.45□□□□□ -1.86
GCN1-202ENST00000547263 HMCN1Q96RW7 5635 aa3.44□□□□□ -1.86
GCN1-202ENST00000547263 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
GCN1-202ENST00000547263 SYNE1Q8NF91 8797 aaKnown RBP3.39□□□□□ -1.87
GCN1-202ENST00000547263 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
GCN1-202ENST00000547263 KRTAP12-4P60329 112 aa3.37□□□□□ -1.87
GCN1-202ENST00000547263 KRTAP5-3Q6L8H2 238 aa3.37□□□□□ -1.87
GCN1-202ENST00000547263 KRTAP5-10Q6L8G5 202 aa3.36□□□□□ -1.87
GCN1-202ENST00000547263 MT1AP04731 61 aa3.34□□□□□ -1.87
GCN1-202ENST00000547263 BRK1Q8WUW1 75 aa3.33□□□□□ -1.88
GCN1-202ENST00000547263 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
GCN1-202ENST00000547263 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
GCN1-202ENST00000547263 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
GCN1-202ENST00000547263 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
GCN1-202ENST00000547263 KRTAP5-7Q6L8G8 165 aa3.22□□□□□ -1.89
GCN1-202ENST00000547263 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
GCN1-202ENST00000547263 PRO0628Q9UI54 55 aa3.19□□□□□ -1.9
GCN1-202ENST00000547263 PMAIP1Q13794 54 aa3.14□□□□□ -1.91
GCN1-202ENST00000547263 KRTAP6-2Q3LI66 62 aa3.1□□□□□ -1.91
GCN1-202ENST00000547263 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.91
GCN1-202ENST00000547263 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
GCN1-202ENST00000547263 MT3P25713 68 aa3.02□□□□□ -1.93
GCN1-202ENST00000547263 PRAC1Q96KF2 57 aa3.02□□□□□ -1.93
GCN1-202ENST00000547263 KTN1-AS1Q86SY8 53 aa2.9□□□□□ -1.95
GCN1-202ENST00000547263 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
GCN1-202ENST00000547263 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
GCN1-202ENST00000547263 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
GCN1-202ENST00000547263 KRTAP9-9Q9BYP9 154 aa2.77□□□□□ -1.97
GCN1-202ENST00000547263 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
GCN1-202ENST00000547263 NDUFAF8A1L188 74 aa2.67□□□□□ -1.98
GCN1-202ENST00000547263 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.98
GCN1-202ENST00000547263 LUZP6Q538Z0 58 aa2.65□□□□□ -1.99
GCN1-202ENST00000547263 KRTAP4-2Q9BYR5 136 aa2.65□□□□□ -1.99
GCN1-202ENST00000547263 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
GCN1-202ENST00000547263 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
GCN1-202ENST00000547263 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
GCN1-202ENST00000547263 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
GCN1-202ENST00000547263 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
GCN1-202ENST00000547263 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
GCN1-202ENST00000547263 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
GCN1-202ENST00000547263 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
GCN1-202ENST00000547263 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
GCN1-202ENST00000547263 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
GCN1-202ENST00000547263 INE1O15225 51 aa2.05□□□□□ -2.08
GCN1-202ENST00000547263 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
GCN1-202ENST00000547263 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
GCN1-202ENST00000547263 PRM1P04553 51 aa1.85□□□□□ -2.11
GCN1-202ENST00000547263 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
GCN1-202ENST00000547263 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
GCN1-202ENST00000547263 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 63.3 ms