RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 KRTAP9-6A8MVA2 160 aa6.39□□□□□ -1.39
VDR-204ENST00000547065 KRTAP19-3Q7Z4W3 81 aa6.3□□□□□ -1.4
VDR-204ENST00000547065 MT1GP13640 62 aa6.29□□□□□ -1.4
VDR-204ENST00000547065 KRTAP9-6A0A140TA67 174 aa6.26□□□□□ -1.41
VDR-204ENST00000547065 MT1MQ8N339 61 aa6.23□□□□□ -1.41
VDR-204ENST00000547065 SPRR2FQ96RM1 72 aa6.21□□□□□ -1.41
VDR-204ENST00000547065 MUC12Q9UKN1 5478 aa6.17□□□□□ -1.42
VDR-204ENST00000547065 KRTAP4-3Q9BYR4 195 aa6.14□□□□□ -1.43
VDR-204ENST00000547065 LCE5AQ5TCM9 118 aa6.13□□□□□ -1.43
VDR-204ENST00000547065 MACF1Q9UPN3 7388 aaKnown RBP6.12□□□□□ -1.43
VDR-204ENST00000547065 KRTAP2-3P0C7H8 128 aa6.1□□□□□ -1.43
VDR-204ENST00000547065 KRTAP2-4Q9BYR9 128 aa6.1□□□□□ -1.43
VDR-204ENST00000547065 KRTAP2-1Q9BYU5 128 aa6.1□□□□□ -1.43
VDR-204ENST00000547065 LOC100996750A0A140TA64 210 aa6.03□□□□□ -1.44
VDR-204ENST00000547065 INE1O15225 51 aa6.03□□□□□ -1.44
VDR-204ENST00000547065 KRTAP5-9P26371 169 aa6□□□□□ -1.45
VDR-204ENST00000547065 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.98□□□□□ -1.45
VDR-204ENST00000547065 SYNE2Q8WXH0 6885 aaKnown RBP5.93□□□□□ -1.46
VDR-204ENST00000547065 LCE1AQ5T7P2 110 aa5.89□□□□□ -1.47
VDR-204ENST00000547065 MDN1Q9NU22 5596 aa5.79□□□□□ -1.48
VDR-204ENST00000547065 SPRR2EP22531 72 aa5.79□□□□□ -1.48
VDR-204ENST00000547065 SPRR2BP35325 72 aa5.79□□□□□ -1.48
VDR-204ENST00000547065 SPRR2AP35326 72 aa5.79□□□□□ -1.48
VDR-204ENST00000547065 KRTAP6-3Q3LI67 103 aa5.74□□□□□ -1.49
VDR-204ENST00000547065 DSTQ03001 7570 aaKnown RBP5.72□□□□□ -1.49
VDR-204ENST00000547065 KRTAP9-7A8MTY7 169 aa5.7□□□□□ -1.5
VDR-204ENST00000547065 MT1AP04731 61 aa5.57□□□□□ -1.52
VDR-204ENST00000547065 SPRR2DP22532 72 aa5.57□□□□□ -1.52
VDR-204ENST00000547065 KRTAP5-5Q701N2 237 aaPredicted RBP5.56□□□□□ -1.52
VDR-204ENST00000547065 KRTAP6-1Q3LI64 71 aa5.53□□□□□ -1.52
VDR-204ENST00000547065 LCE3BQ5TA77 95 aa5.47□□□□□ -1.53
VDR-204ENST00000547065 NEBP20929 6669 aa5.46□□□□□ -1.53
VDR-204ENST00000547065 KRTAP9-4Q9BYQ2 154 aa5.28□□□□□ -1.56
VDR-204ENST00000547065 SYNE1Q8NF91 8797 aaKnown RBP5.27□□□□□ -1.57
VDR-204ENST00000547065 KRTAP12-4P60329 112 aa5.27□□□□□ -1.57
VDR-204ENST00000547065 KRTAP4-9Q9BYQ8 210 aa5.24□□□□□ -1.57
VDR-204ENST00000547065 LCE3DQ9BYE3 92 aa5.14□□□□□ -1.59
VDR-204ENST00000547065 KRTAP5-4Q6L8H1 288 aa5.11□□□□□ -1.59
VDR-204ENST00000547065 MT3P25713 68 aa5.05□□□□□ -1.6
VDR-204ENST00000547065 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
VDR-204ENST00000547065 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
VDR-204ENST00000547065 KRTAP20-1Q3LI63 56 aa5.01□□□□□ -1.61
VDR-204ENST00000547065 LCE4AQ5TA78 99 aa4.93□□□□□ -1.62
VDR-204ENST00000547065 KRTAP2-2Q9BYT5 123 aa4.91□□□□□ -1.62
VDR-204ENST00000547065 KRTAP4-6Q9BYQ5 205 aa4.84□□□□□ -1.63
VDR-204ENST00000547065 MT4P47944 62 aa4.83□□□□□ -1.64
VDR-204ENST00000547065 KRTAP20-2Q3LI61 65 aa4.77□□□□□ -1.65
VDR-204ENST00000547065 KRTAP5-2Q701N4 177 aa4.71□□□□□ -1.66
VDR-204ENST00000547065 LCE1DQ5T752 114 aa4.66□□□□□ -1.66
VDR-204ENST00000547065 HMCN1Q96RW7 5635 aa4.63□□□□□ -1.67
VDR-204ENST00000547065 PRM1P04553 51 aa4.58□□□□□ -1.68
VDR-204ENST00000547065 KRTAP5-3Q6L8H2 238 aa4.58□□□□□ -1.68
VDR-204ENST00000547065 OBSCNQ5VST9 7968 aa4.55□□□□□ -1.68
VDR-204ENST00000547065 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
VDR-204ENST00000547065 AHNAK2Q8IVF2 5795 aa4.18□□□□□ -1.74
VDR-204ENST00000547065 MUC5ACP98088 5654 aa4.09□□□□□ -1.75
VDR-204ENST00000547065 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
VDR-204ENST00000547065 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
VDR-204ENST00000547065 KRTAP5-1Q6L8H4 278 aa4.02□□□□□ -1.77
VDR-204ENST00000547065 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
VDR-204ENST00000547065 LCE1CQ5T751 118 aa3.99□□□□□ -1.77
VDR-204ENST00000547065 GPR98Q8WXG9 6306 aa3.96□□□□□ -1.78
VDR-204ENST00000547065 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.78
VDR-204ENST00000547065 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
VDR-204ENST00000547065 KRTAP5-7Q6L8G8 165 aa3.83□□□□□ -1.8
VDR-204ENST00000547065 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
VDR-204ENST00000547065 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
VDR-204ENST00000547065 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
VDR-204ENST00000547065 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
VDR-204ENST00000547065 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
VDR-204ENST00000547065 AHNAKQ09666 5890 aaKnown RBP3.23□□□□□ -1.89
VDR-204ENST00000547065 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.9
VDR-204ENST00000547065 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
VDR-204ENST00000547065 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
VDR-204ENST00000547065 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
VDR-204ENST00000547065 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
VDR-204ENST00000547065 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
VDR-204ENST00000547065 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 53.8 ms