RNA–Protein interactions for RNA: ENST00000546964.5

PFKM-206, Transcript of phosphofructokinase, muscle, humanhuman

TSL 1 (best)

Gene PFKM, Length 3,063 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-206ENST00000546964 CRCT1Q9UGL9 99 aa3.48□□□□□ -1.85
PFKM-206ENST00000546964 KRTAP19-5Q3LI72 72 aa3.47□□□□□ -1.85
PFKM-206ENST00000546964 KRTAP19-1Q8IUB9 90 aa3.47□□□□□ -1.85
PFKM-206ENST00000546964 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.86
PFKM-206ENST00000546964 KRTAP4-9Q9BYQ8 210 aa3.43□□□□□ -1.86
PFKM-206ENST00000546964 USH2AO75445 5202 aa3.43□□□□□ -1.86
PFKM-206ENST00000546964 KRTAP9-8Q9BYQ0 159 aa3.4□□□□□ -1.87
PFKM-206ENST00000546964 DSTQ03001 7570 aaKnown RBP3.37□□□□□ -1.87
PFKM-206ENST00000546964 KRTAP9-4Q9BYQ2 154 aa3.36□□□□□ -1.87
PFKM-206ENST00000546964 MT1FP04733 61 aa3.34□□□□□ -1.88
PFKM-206ENST00000546964 MT2AP02795 61 aa3.33□□□□□ -1.88
PFKM-206ENST00000546964 MT1XP80297 61 aa3.32□□□□□ -1.88
PFKM-206ENST00000546964 KRTAP19-4Q3LI73 84 aa3.3□□□□□ -1.88
PFKM-206ENST00000546964 KRTAP9-3Q9BYQ3 159 aa3.3□□□□□ -1.88
PFKM-206ENST00000546964 LOC100996750A0A140TA64 210 aa3.3□□□□□ -1.88
PFKM-206ENST00000546964 KRTAP19-8Q3LI54 63 aa3.28□□□□□ -1.88
PFKM-206ENST00000546964 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
PFKM-206ENST00000546964 FCGBPQ9Y6R7 5405 aaPredicted RBP3.28□□□□□ -1.89
PFKM-206ENST00000546964 MT1BP07438 61 aa3.25□□□□□ -1.89
PFKM-206ENST00000546964 KRTAP19-6Q3LI70 58 aa3.24□□□□□ -1.89
PFKM-206ENST00000546964 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.23□□□□□ -1.89
PFKM-206ENST00000546964 KRTAP4-8A0A0G2JLE6 195 aa3.18□□□□□ -1.9
PFKM-206ENST00000546964 KRTAP4-8Q9BYQ9 185 aa3.18□□□□□ -1.9
PFKM-206ENST00000546964 LCE3BQ5TA77 95 aa3.17□□□□□ -1.9
PFKM-206ENST00000546964 KRTAP9-9Q9BYP9 154 aa3.16□□□□□ -1.9
PFKM-206ENST00000546964 SSPOA2VEC9 5147 aa3.14□□□□□ -1.91
PFKM-206ENST00000546964 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.91
PFKM-206ENST00000546964 MT1GP13640 62 aa3.08□□□□□ -1.92
PFKM-206ENST00000546964 KRTAP4-3Q9BYR4 195 aa3.08□□□□□ -1.92
PFKM-206ENST00000546964 LCE4AQ5TA78 99 aa3.04□□□□□ -1.92
PFKM-206ENST00000546964 KRTAP5-9P26371 169 aa2.96□□□□□ -1.94
PFKM-206ENST00000546964 KRTAP19-7Q3SYF9 63 aa2.94□□□□□ -1.94
PFKM-206ENST00000546964 SYNE2Q8WXH0 6885 aaKnown RBP2.93□□□□□ -1.94
PFKM-206ENST00000546964 MACF1Q9UPN3 7388 aaKnown RBP2.92□□□□□ -1.94
PFKM-206ENST00000546964 MT1LQ93083 61 aa2.91□□□□□ -1.94
PFKM-206ENST00000546964 MUC12Q9UKN1 5478 aa2.89□□□□□ -1.95
PFKM-206ENST00000546964 NEBP20929 6669 aa2.85□□□□□ -1.95
PFKM-206ENST00000546964 KRTAP20-1Q3LI63 56 aa2.84□□□□□ -1.96
PFKM-206ENST00000546964 MT1EP04732 61 aa2.83□□□□□ -1.96
PFKM-206ENST00000546964 MT1AP04731 61 aa2.77□□□□□ -1.97
PFKM-206ENST00000546964 MDN1Q9NU22 5596 aa2.76□□□□□ -1.97
PFKM-206ENST00000546964 KRTAP4-11Q9BYQ6 195 aa2.74□□□□□ -1.97
PFKM-206ENST00000546964 SPRR2FQ96RM1 72 aa2.73□□□□□ -1.97
PFKM-206ENST00000546964 SPRR2EP22531 72 aa2.72□□□□□ -1.97
PFKM-206ENST00000546964 MT3P25713 68 aa2.72□□□□□ -1.97
PFKM-206ENST00000546964 SPRR2BP35325 72 aa2.72□□□□□ -1.97
PFKM-206ENST00000546964 SPRR2AP35326 72 aa2.72□□□□□ -1.97
PFKM-206ENST00000546964 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
PFKM-206ENST00000546964 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
PFKM-206ENST00000546964 KRTAP4-6Q9BYQ5 205 aa2.67□□□□□ -1.98
PFKM-206ENST00000546964 SPRR2DP22532 72 aa2.65□□□□□ -1.98
PFKM-206ENST00000546964 KRTAP6-1Q3LI64 71 aa2.63□□□□□ -1.99
PFKM-206ENST00000546964 MT1MQ8N339 61 aa2.63□□□□□ -1.99
PFKM-206ENST00000546964 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
PFKM-206ENST00000546964 KRTAP19-3Q7Z4W3 81 aa2.6□□□□□ -1.99
PFKM-206ENST00000546964 KRTAP4-12Q9BQ66 201 aa2.46□□□□□ -2.02
PFKM-206ENST00000546964 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.02
PFKM-206ENST00000546964 KRTAP5-4Q6L8H1 288 aa2.38□□□□□ -2.03
PFKM-206ENST00000546964 KRTAP5-3Q6L8H2 238 aa2.32□□□□□ -2.04
PFKM-206ENST00000546964 MT4P47944 62 aa2.23□□□□□ -2.05
PFKM-206ENST00000546964 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
PFKM-206ENST00000546964 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
PFKM-206ENST00000546964 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
PFKM-206ENST00000546964 KRTAP20-2Q3LI61 65 aa2.19□□□□□ -2.06
PFKM-206ENST00000546964 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
PFKM-206ENST00000546964 HMCN1Q96RW7 5635 aa2.18□□□□□ -2.06
PFKM-206ENST00000546964 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
PFKM-206ENST00000546964 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
PFKM-206ENST00000546964 KRTAP4-2Q9BYR5 136 aa2.01□□□□□ -2.09
PFKM-206ENST00000546964 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
PFKM-206ENST00000546964 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
PFKM-206ENST00000546964 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
PFKM-206ENST00000546964 KRTAP5-1Q6L8H4 278 aa1.82□□□□□ -2.12
PFKM-206ENST00000546964 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.14
PFKM-206ENST00000546964 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
PFKM-206ENST00000546964 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.17
PFKM-206ENST00000546964 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
PFKM-206ENST00000546964 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 69.4 ms