RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 FCGBPQ9Y6R7 5405 aaPredicted RBP4.59□□□□□ -1.67
SLC38A1-204ENST00000546893 KMT2DO14686 5537 aa4.58□□□□□ -1.68
SLC38A1-204ENST00000546893 CRCT1Q9UGL9 99 aa4.57□□□□□ -1.68
SLC38A1-204ENST00000546893 LOC100996750A0A140TA64 210 aa4.57□□□□□ -1.68
SLC38A1-204ENST00000546893 KRTAP4-6Q9BYQ5 205 aa4.57□□□□□ -1.68
SLC38A1-204ENST00000546893 KRTAP4-7Q9BYR0 210 aa4.55□□□□□ -1.68
SLC38A1-204ENST00000546893 MT1GP13640 62 aa4.47□□□□□ -1.69
SLC38A1-204ENST00000546893 KRTAP12-4P60329 112 aa4.44□□□□□ -1.7
SLC38A1-204ENST00000546893 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
SLC38A1-204ENST00000546893 MT1MQ8N339 61 aa4.39□□□□□ -1.71
SLC38A1-204ENST00000546893 KRTAP9-6A0A140TA67 174 aa4.35□□□□□ -1.71
SLC38A1-204ENST00000546893 MACF1Q9UPN3 7388 aaKnown RBP4.33□□□□□ -1.72
SLC38A1-204ENST00000546893 SPRR2FQ96RM1 72 aa4.27□□□□□ -1.73
SLC38A1-204ENST00000546893 LCE5AQ5TCM9 118 aa4.26□□□□□ -1.73
SLC38A1-204ENST00000546893 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
SLC38A1-204ENST00000546893 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
SLC38A1-204ENST00000546893 MUC12Q9UKN1 5478 aa4.21□□□□□ -1.74
SLC38A1-204ENST00000546893 KRTAP5-9P26371 169 aa4.2□□□□□ -1.74
SLC38A1-204ENST00000546893 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
SLC38A1-204ENST00000546893 SYNE2Q8WXH0 6885 aaKnown RBP4.2□□□□□ -1.74
SLC38A1-204ENST00000546893 KRTAP6-3Q3LI67 103 aa4.16□□□□□ -1.74
SLC38A1-204ENST00000546893 KRTAP2-2Q9BYT5 123 aa4.15□□□□□ -1.75
SLC38A1-204ENST00000546893 MT1AP04731 61 aa4.12□□□□□ -1.75
SLC38A1-204ENST00000546893 LCE1AQ5T7P2 110 aa4.08□□□□□ -1.76
SLC38A1-204ENST00000546893 SPRR2EP22531 72 aa4.05□□□□□ -1.76
SLC38A1-204ENST00000546893 SPRR2BP35325 72 aa4.05□□□□□ -1.76
SLC38A1-204ENST00000546893 SPRR2AP35326 72 aa4.05□□□□□ -1.76
SLC38A1-204ENST00000546893 MDN1Q9NU22 5596 aa4.05□□□□□ -1.76
SLC38A1-204ENST00000546893 KRTAP9-7A8MTY7 169 aa4.04□□□□□ -1.76
SLC38A1-204ENST00000546893 PRM1P04553 51 aa4.04□□□□□ -1.76
SLC38A1-204ENST00000546893 LCE3BQ5TA77 95 aa3.98□□□□□ -1.77
SLC38A1-204ENST00000546893 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
SLC38A1-204ENST00000546893 KRTAP4-9Q9BYQ8 210 aa3.98□□□□□ -1.77
SLC38A1-204ENST00000546893 KRTAP6-1Q3LI64 71 aa3.93□□□□□ -1.78
SLC38A1-204ENST00000546893 SYNE1Q8NF91 8797 aaKnown RBP3.93□□□□□ -1.78
SLC38A1-204ENST00000546893 LCE3DQ9BYE3 92 aa3.91□□□□□ -1.78
SLC38A1-204ENST00000546893 SPRR2DP22532 72 aa3.89□□□□□ -1.79
SLC38A1-204ENST00000546893 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
SLC38A1-204ENST00000546893 DSTQ03001 7570 aaKnown RBP3.86□□□□□ -1.79
SLC38A1-204ENST00000546893 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
SLC38A1-204ENST00000546893 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
SLC38A1-204ENST00000546893 KRTAP9-9Q9BYP9 154 aa3.77□□□□□ -1.81
SLC38A1-204ENST00000546893 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
SLC38A1-204ENST00000546893 NEBP20929 6669 aa3.77□□□□□ -1.81
SLC38A1-204ENST00000546893 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
SLC38A1-204ENST00000546893 LCE1DQ5T752 114 aa3.68□□□□□ -1.82
SLC38A1-204ENST00000546893 MT3P25713 68 aa3.64□□□□□ -1.83
SLC38A1-204ENST00000546893 HMCN1Q96RW7 5635 aa3.58□□□□□ -1.84
SLC38A1-204ENST00000546893 KRTAP20-1Q3LI63 56 aa3.54□□□□□ -1.84
SLC38A1-204ENST00000546893 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
SLC38A1-204ENST00000546893 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
SLC38A1-204ENST00000546893 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
SLC38A1-204ENST00000546893 KRTAP4-2Q9BYR5 136 aa3.44□□□□□ -1.86
SLC38A1-204ENST00000546893 MT4P47944 62 aa3.4□□□□□ -1.87
SLC38A1-204ENST00000546893 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
SLC38A1-204ENST00000546893 KRTAP20-2Q3LI61 65 aa3.3□□□□□ -1.88
SLC38A1-204ENST00000546893 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
SLC38A1-204ENST00000546893 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
SLC38A1-204ENST00000546893 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
SLC38A1-204ENST00000546893 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
SLC38A1-204ENST00000546893 AHNAK2Q8IVF2 5795 aa2.85□□□□□ -1.95
SLC38A1-204ENST00000546893 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
SLC38A1-204ENST00000546893 KRTAP5-10Q6L8G5 202 aa2.83□□□□□ -1.96
SLC38A1-204ENST00000546893 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
SLC38A1-204ENST00000546893 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
SLC38A1-204ENST00000546893 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
SLC38A1-204ENST00000546893 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
SLC38A1-204ENST00000546893 KRTAP5-7Q6L8G8 165 aa2.64□□□□□ -1.99
SLC38A1-204ENST00000546893 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
SLC38A1-204ENST00000546893 GPR98Q8WXG9 6306 aa2.59□□□□□ -2
SLC38A1-204ENST00000546893 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
SLC38A1-204ENST00000546893 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
SLC38A1-204ENST00000546893 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
SLC38A1-204ENST00000546893 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
SLC38A1-204ENST00000546893 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
SLC38A1-204ENST00000546893 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
SLC38A1-204ENST00000546893 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 106 ms