RNA–Protein interactions for RNA: ENST00000546748.1

ERBB3-204, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-204ENST00000546748 KRTAP19-3Q7Z4W3 81 aa2.65□□□□□ -1.99
ERBB3-204ENST00000546748 SPRR2FQ96RM1 72 aa2.64□□□□□ -1.99
ERBB3-204ENST00000546748 KRTAP4-7Q9BYR0 210 aa2.63□□□□□ -1.99
ERBB3-204ENST00000546748 KRTAP9-6A8MVA2 160 aa2.61□□□□□ -1.99
ERBB3-204ENST00000546748 MT1MQ8N339 61 aa2.61□□□□□ -1.99
ERBB3-204ENST00000546748 LOC100996750A0A140TA64 210 aa2.59□□□□□ -1.99
ERBB3-204ENST00000546748 KRTAP4-6Q9BYQ5 205 aa2.59□□□□□ -1.99
ERBB3-204ENST00000546748 LCE5AQ5TCM9 118 aa2.57□□□□□ -2
ERBB3-204ENST00000546748 KRTAP5-9P26371 169 aa2.55□□□□□ -2
ERBB3-204ENST00000546748 MUC12Q9UKN1 5478 aa2.53□□□□□ -2
ERBB3-204ENST00000546748 KRTAP4-3Q9BYR4 195 aa2.53□□□□□ -2
ERBB3-204ENST00000546748 KRTAP2-3P0C7H8 128 aa2.52□□□□□ -2.01
ERBB3-204ENST00000546748 KRTAP2-4Q9BYR9 128 aa2.52□□□□□ -2.01
ERBB3-204ENST00000546748 KRTAP2-1Q9BYU5 128 aa2.52□□□□□ -2.01
ERBB3-204ENST00000546748 MACF1Q9UPN3 7388 aaKnown RBP2.52□□□□□ -2.01
ERBB3-204ENST00000546748 INE1O15225 51 aa2.51□□□□□ -2.01
ERBB3-204ENST00000546748 LCE1AQ5T7P2 110 aa2.49□□□□□ -2.01
ERBB3-204ENST00000546748 SPRR2EP22531 72 aa2.48□□□□□ -2.01
ERBB3-204ENST00000546748 SPRR2BP35325 72 aa2.48□□□□□ -2.01
ERBB3-204ENST00000546748 SPRR2AP35326 72 aa2.48□□□□□ -2.01
ERBB3-204ENST00000546748 KRTAP9-6A0A140TA67 174 aa2.46□□□□□ -2.02
ERBB3-204ENST00000546748 KRTAP6-3Q3LI67 103 aa2.46□□□□□ -2.02
ERBB3-204ENST00000546748 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.45□□□□□ -2.02
ERBB3-204ENST00000546748 SPRR2DP22532 72 aa2.39□□□□□ -2.03
ERBB3-204ENST00000546748 MDN1Q9NU22 5596 aa2.37□□□□□ -2.03
ERBB3-204ENST00000546748 SYNE2Q8WXH0 6885 aaKnown RBP2.36□□□□□ -2.03
ERBB3-204ENST00000546748 MT1AP04731 61 aa2.35□□□□□ -2.03
ERBB3-204ENST00000546748 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
ERBB3-204ENST00000546748 KRTAP6-1Q3LI64 71 aa2.3□□□□□ -2.04
ERBB3-204ENST00000546748 KRTAP4-12Q9BQ66 201 aa2.3□□□□□ -2.04
ERBB3-204ENST00000546748 LCE3BQ5TA77 95 aa2.29□□□□□ -2.04
ERBB3-204ENST00000546748 DSTQ03001 7570 aaKnown RBP2.28□□□□□ -2.04
ERBB3-204ENST00000546748 KRTAP9-7A8MTY7 169 aa2.27□□□□□ -2.05
ERBB3-204ENST00000546748 KRTAP9-9Q9BYP9 154 aa2.24□□□□□ -2.05
ERBB3-204ENST00000546748 KRTAP9-4Q9BYQ2 154 aa2.24□□□□□ -2.05
ERBB3-204ENST00000546748 NEBP20929 6669 aa2.21□□□□□ -2.06
ERBB3-204ENST00000546748 KRTAP12-4P60329 112 aa2.18□□□□□ -2.06
ERBB3-204ENST00000546748 KRTAP5-4Q6L8H1 288 aa2.16□□□□□ -2.06
ERBB3-204ENST00000546748 SYNE1Q8NF91 8797 aaKnown RBP2.16□□□□□ -2.06
ERBB3-204ENST00000546748 MT3P25713 68 aa2.14□□□□□ -2.07
ERBB3-204ENST00000546748 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
ERBB3-204ENST00000546748 KRTAP4-9Q9BYQ8 210 aa2.14□□□□□ -2.07
ERBB3-204ENST00000546748 LCE1DQ5T752 114 aa2.13□□□□□ -2.07
ERBB3-204ENST00000546748 LCE4AQ5TA78 99 aa2.13□□□□□ -2.07
ERBB3-204ENST00000546748 KRTAP6-2Q3LI66 62 aa2.11□□□□□ -2.07
ERBB3-204ENST00000546748 LCE3EQ5T5B0 92 aa2.11□□□□□ -2.07
ERBB3-204ENST00000546748 KRTAP2-2Q9BYT5 123 aa2.09□□□□□ -2.07
ERBB3-204ENST00000546748 MT4P47944 62 aa2.05□□□□□ -2.08
ERBB3-204ENST00000546748 KRTAP20-1Q3LI63 56 aa2.05□□□□□ -2.08
ERBB3-204ENST00000546748 KRTAP4-2Q9BYR5 136 aa2.03□□□□□ -2.08
ERBB3-204ENST00000546748 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
ERBB3-204ENST00000546748 KRTAP4-11Q9BYQ6 195 aa2□□□□□ -2.09
ERBB3-204ENST00000546748 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
ERBB3-204ENST00000546748 HMCN1Q96RW7 5635 aa1.94□□□□□ -2.1
ERBB3-204ENST00000546748 KRTAP5-3Q6L8H2 238 aa1.92□□□□□ -2.1
ERBB3-204ENST00000546748 PRM1P04553 51 aa1.89□□□□□ -2.11
ERBB3-204ENST00000546748 OBSCNQ5VST9 7968 aa1.86□□□□□ -2.11
ERBB3-204ENST00000546748 LCE1EQ5T753 118 aa1.81□□□□□ -2.12
ERBB3-204ENST00000546748 LCE1BQ5T7P3 118 aa1.71□□□□□ -2.14
ERBB3-204ENST00000546748 AHNAK2Q8IVF2 5795 aa1.7□□□□□ -2.14
ERBB3-204ENST00000546748 MUC5ACP98088 5654 aa1.69□□□□□ -2.14
ERBB3-204ENST00000546748 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
ERBB3-204ENST00000546748 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
ERBB3-204ENST00000546748 KRTAP5-1Q6L8H4 278 aa1.68□□□□□ -2.14
ERBB3-204ENST00000546748 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
ERBB3-204ENST00000546748 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
ERBB3-204ENST00000546748 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.58□□□□□ -2.16
ERBB3-204ENST00000546748 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
ERBB3-204ENST00000546748 KRTAP5-11Q6L8G4 156 aa1.48□□□□□ -2.17
ERBB3-204ENST00000546748 GPR98Q8WXG9 6306 aa1.45□□□□□ -2.18
ERBB3-204ENST00000546748 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
ERBB3-204ENST00000546748 KRTAP4-4Q9BYR3 166 aa1.32□□□□□ -2.2
ERBB3-204ENST00000546748 LCE1FQ5T754 118 aa1.31□□□□□ -2.2
ERBB3-204ENST00000546748 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
ERBB3-204ENST00000546748 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
ERBB3-204ENST00000546748 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
ERBB3-204ENST00000546748 MUC19Q7Z5P9 8384 aa1.09□□□□□ -2.23
ERBB3-204ENST00000546748 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 14.6 ms