RNA–Protein interactions for RNA: ENST00000546561.2

TSPAN8-203, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,168 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-203ENST00000546561 CAMK2N1Q7Z7J9 78 aa3.4□□□□□ -1.87
TSPAN8-203ENST00000546561 MT1BP07438 61 aa3.33□□□□□ -1.88
TSPAN8-203ENST00000546561 ROMO1P60602 79 aa3.32□□□□□ -1.88
TSPAN8-203ENST00000546561 PRO2289Q9P1D8 64 aa3.3□□□□□ -1.88
TSPAN8-203ENST00000546561 PRAC1Q96KF2 57 aa3.29□□□□□ -1.88
TSPAN8-203ENST00000546561 KRTAP10-12P60413 245 aa3.28□□□□□ -1.88
TSPAN8-203ENST00000546561 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
TSPAN8-203ENST00000546561 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
TSPAN8-203ENST00000546561 KRTAP25-1Q3LHN0 102 aa3.23□□□□□ -1.89
TSPAN8-203ENST00000546561 C10orf95Q9H7T3 257 aa3.23□□□□□ -1.89
TSPAN8-203ENST00000546561 TNP1P09430 55 aa3.22□□□□□ -1.89
TSPAN8-203ENST00000546561 MT1XP80297 61 aa3.22□□□□□ -1.89
TSPAN8-203ENST00000546561 USH2AO75445 5202 aa3.2□□□□□ -1.9
TSPAN8-203ENST00000546561 KRTAP19-6Q3LI70 58 aa3.18□□□□□ -1.9
TSPAN8-203ENST00000546561 SSPOA2VEC9 5147 aa3.17□□□□□ -1.9
TSPAN8-203ENST00000546561 PP632Q6XCG6 107 aa3.13□□□□□ -1.91
TSPAN8-203ENST00000546561 LCE3CQ5T5A8 94 aa3.11□□□□□ -1.91
TSPAN8-203ENST00000546561 CRCT1Q9UGL9 99 aa3.08□□□□□ -1.92
TSPAN8-203ENST00000546561 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
TSPAN8-203ENST00000546561 LCE3AQ5TA76 89 aa3.03□□□□□ -1.92
TSPAN8-203ENST00000546561 FSIP2Q5CZC0 6907 aa3.02□□□□□ -1.93
TSPAN8-203ENST00000546561 FCGBPQ9Y6R7 5405 aaPredicted RBP2.98□□□□□ -1.93
TSPAN8-203ENST00000546561 KRTAP8-1Q8IUC2 63 aa2.98□□□□□ -1.93
TSPAN8-203ENST00000546561 KRTAP12-3P60328 96 aa2.93□□□□□ -1.94
TSPAN8-203ENST00000546561 KRTAP19-5Q3LI72 72 aa2.91□□□□□ -1.94
TSPAN8-203ENST00000546561 KMT2DO14686 5537 aa2.89□□□□□ -1.95
TSPAN8-203ENST00000546561 KRTAP19-7Q3SYF9 63 aa2.86□□□□□ -1.95
TSPAN8-203ENST00000546561 MT1EP04732 61 aa2.84□□□□□ -1.95
TSPAN8-203ENST00000546561 SPRR2FQ96RM1 72 aa2.84□□□□□ -1.95
TSPAN8-203ENST00000546561 MACF1Q9UPN3 7388 aaKnown RBP2.83□□□□□ -1.96
TSPAN8-203ENST00000546561 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
TSPAN8-203ENST00000546561 KRTAP6-3Q3LI67 103 aa2.79□□□□□ -1.96
TSPAN8-203ENST00000546561 MT1LQ93083 61 aa2.77□□□□□ -1.97
TSPAN8-203ENST00000546561 KRTAP19-3Q7Z4W3 81 aa2.75□□□□□ -1.97
TSPAN8-203ENST00000546561 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
TSPAN8-203ENST00000546561 MT1GP13640 62 aa2.73□□□□□ -1.97
TSPAN8-203ENST00000546561 SPRR2EP22531 72 aa2.71□□□□□ -1.98
TSPAN8-203ENST00000546561 SPRR2BP35325 72 aa2.71□□□□□ -1.98
TSPAN8-203ENST00000546561 SPRR2AP35326 72 aa2.71□□□□□ -1.98
TSPAN8-203ENST00000546561 SYNE2Q8WXH0 6885 aaKnown RBP2.7□□□□□ -1.98
TSPAN8-203ENST00000546561 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
TSPAN8-203ENST00000546561 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
TSPAN8-203ENST00000546561 MUC12Q9UKN1 5478 aa2.7□□□□□ -1.98
TSPAN8-203ENST00000546561 SPRR5A0A1B0GTR4 108 aa2.68□□□□□ -1.98
TSPAN8-203ENST00000546561 LUZP6Q538Z0 58 aa2.68□□□□□ -1.98
TSPAN8-203ENST00000546561 MT1MQ8N339 61 aa2.68□□□□□ -1.98
TSPAN8-203ENST00000546561 SPRR2DP22532 72 aa2.62□□□□□ -1.99
TSPAN8-203ENST00000546561 MDN1Q9NU22 5596 aa2.61□□□□□ -1.99
TSPAN8-203ENST00000546561 NEBP20929 6669 aa2.51□□□□□ -2.01
TSPAN8-203ENST00000546561 KRTAP2-3P0C7H8 128 aa2.45□□□□□ -2.02
TSPAN8-203ENST00000546561 KRTAP2-4Q9BYR9 128 aa2.45□□□□□ -2.02
TSPAN8-203ENST00000546561 DSTQ03001 7570 aaKnown RBP2.43□□□□□ -2.02
TSPAN8-203ENST00000546561 KRTAP20-1Q3LI63 56 aa2.43□□□□□ -2.02
TSPAN8-203ENST00000546561 KRTAP2-1Q9BYU5 128 aa2.39□□□□□ -2.03
TSPAN8-203ENST00000546561 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
TSPAN8-203ENST00000546561 MT1AP04731 61 aa2.38□□□□□ -2.03
TSPAN8-203ENST00000546561 KRTAP6-1Q3LI64 71 aa2.32□□□□□ -2.04
TSPAN8-203ENST00000546561 INE1O15225 51 aa2.31□□□□□ -2.04
TSPAN8-203ENST00000546561 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
TSPAN8-203ENST00000546561 KRTAP12-4P60329 112 aa2.3□□□□□ -2.04
TSPAN8-203ENST00000546561 MT4P47944 62 aa2.24□□□□□ -2.05
TSPAN8-203ENST00000546561 SYNE1Q8NF91 8797 aaKnown RBP2.23□□□□□ -2.05
TSPAN8-203ENST00000546561 KRTAP20-2Q3LI61 65 aa2.18□□□□□ -2.06
TSPAN8-203ENST00000546561 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
TSPAN8-203ENST00000546561 KRTAP6-2Q3LI66 62 aa2.15□□□□□ -2.07
TSPAN8-203ENST00000546561 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
TSPAN8-203ENST00000546561 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
TSPAN8-203ENST00000546561 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
TSPAN8-203ENST00000546561 KRTAP5-10Q6L8G5 202 aa1.85□□□□□ -2.11
TSPAN8-203ENST00000546561 GPR98Q8WXG9 6306 aa1.72□□□□□ -2.13
TSPAN8-203ENST00000546561 MUC5ACP98088 5654 aa1.71□□□□□ -2.14
TSPAN8-203ENST00000546561 PRM1P04553 51 aa1.71□□□□□ -2.14
TSPAN8-203ENST00000546561 MUC5BQ9HC84 5762 aaPredicted RBP1.58□□□□□ -2.16
TSPAN8-203ENST00000546561 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
TSPAN8-203ENST00000546561 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
TSPAN8-203ENST00000546561 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
TSPAN8-203ENST00000546561 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 36.6 ms