RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 AHNAK2Q8IVF2 5795 aa6.46□□□□□ -1.38
CHPT1-202ENST00000546490 PRR15LQ9BU68 103 aa6.41□□□□□ -1.38
CHPT1-202ENST00000546490 KRTAP4-6Q9BYQ5 205 aa6.37□□□□□ -1.39
CHPT1-202ENST00000546490 ANAPC13Q9BS18 74 aa6.36□□□□□ -1.39
CHPT1-202ENST00000546490 KRTAP12-3P60328 96 aa6.32□□□□□ -1.4
CHPT1-202ENST00000546490 KRTAP5-10Q6L8G5 202 aa6.32□□□□□ -1.4
CHPT1-202ENST00000546490 ATP5EP56381 51 aaPredicted RBP6.29□□□□□ -1.4
CHPT1-202ENST00000546490 KRTAP4-7Q9BYR0 210 aa6.28□□□□□ -1.4
CHPT1-202ENST00000546490 LINC01558Q9Y6Z2 57 aa6.24□□□□□ -1.41
CHPT1-202ENST00000546490 CCDC179H3BU77 68 aa6.21□□□□□ -1.42
CHPT1-202ENST00000546490 UQCR11O14957 56 aa6.16□□□□□ -1.42
CHPT1-202ENST00000546490 KRTAP20-2Q3LI61 65 aa6.14□□□□□ -1.43
CHPT1-202ENST00000546490 KRTAP5-3Q6L8H2 238 aa6.14□□□□□ -1.43
CHPT1-202ENST00000546490 KRTAP5-5Q701N2 237 aaPredicted RBP6.14□□□□□ -1.43
CHPT1-202ENST00000546490 KRTAP5-7Q6L8G8 165 aa6.11□□□□□ -1.43
CHPT1-202ENST00000546490 SPRR5A0A1B0GTR4 108 aa6.09□□□□□ -1.43
CHPT1-202ENST00000546490 KRTAP25-1Q3LHN0 102 aa6.09□□□□□ -1.43
CHPT1-202ENST00000546490 KRTAP12-4P60329 112 aa6.05□□□□□ -1.44
CHPT1-202ENST00000546490 TMEM258P61165 79 aa6.01□□□□□ -1.45
CHPT1-202ENST00000546490 MIR22HGQ0VDD5 57 aa5.99□□□□□ -1.45
CHPT1-202ENST00000546490 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
CHPT1-202ENST00000546490 K7ERS5 55 aa5.96□□□□□ -1.46
CHPT1-202ENST00000546490 KRTAP19-4Q3LI73 84 aa5.96□□□□□ -1.46
CHPT1-202ENST00000546490 SYNE1Q8NF91 8797 aaKnown RBP5.93□□□□□ -1.46
CHPT1-202ENST00000546490 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
CHPT1-202ENST00000546490 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
CHPT1-202ENST00000546490 LCE3CQ5T5A8 94 aa5.79□□□□□ -1.48
CHPT1-202ENST00000546490 V9GYY9 64 aa5.75□□□□□ -1.49
CHPT1-202ENST00000546490 PSPHP1O15172 72 aa5.74□□□□□ -1.49
CHPT1-202ENST00000546490 MT1AP04731 61 aa5.67□□□□□ -1.5
CHPT1-202ENST00000546490 Q1T7F1 81 aa5.66□□□□□ -1.5
CHPT1-202ENST00000546490 KRTAP5-2Q701N4 177 aa5.65□□□□□ -1.5
CHPT1-202ENST00000546490 KRTAP4-11Q9BYQ6 195 aa5.64□□□□□ -1.51
CHPT1-202ENST00000546490 KRTAP6-1Q3LI64 71 aa5.63□□□□□ -1.51
CHPT1-202ENST00000546490 CDC42SE1Q9NRR8 79 aa5.61□□□□□ -1.51
CHPT1-202ENST00000546490 A6NED7 52 aa5.56□□□□□ -1.52
CHPT1-202ENST00000546490 RPS28P62857 69 aaKnown RBP5.51□□□□□ -1.53
CHPT1-202ENST00000546490 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
CHPT1-202ENST00000546490 ROMO1P60602 79 aa5.47□□□□□ -1.53
CHPT1-202ENST00000546490 KRTAP5-8O75690 187 aa5.45□□□□□ -1.54
CHPT1-202ENST00000546490 KRTAP9-6A8MVA2 160 aa5.44□□□□□ -1.54
CHPT1-202ENST00000546490 KRTAP6-2Q3LI66 62 aa5.42□□□□□ -1.54
CHPT1-202ENST00000546490 OBSCNQ5VST9 7968 aa5.34□□□□□ -1.55
CHPT1-202ENST00000546490 MUC5ACP98088 5654 aa5.34□□□□□ -1.55
CHPT1-202ENST00000546490 AHNAKQ09666 5890 aaKnown RBP5.34□□□□□ -1.56
CHPT1-202ENST00000546490 MUC5BQ9HC84 5762 aaPredicted RBP5.34□□□□□ -1.56
CHPT1-202ENST00000546490 KRTAP9-9Q9BYP9 154 aa5.23□□□□□ -1.57
CHPT1-202ENST00000546490 MT3P25713 68 aa5.19□□□□□ -1.58
CHPT1-202ENST00000546490 KRTAP5-1Q6L8H4 278 aa5.09□□□□□ -1.59
CHPT1-202ENST00000546490 LCE1EQ5T753 118 aa4.81□□□□□ -1.64
CHPT1-202ENST00000546490 PCP4P48539 62 aa4.78□□□□□ -1.64
CHPT1-202ENST00000546490 KRTAP4-2Q9BYR5 136 aa4.56□□□□□ -1.68
CHPT1-202ENST00000546490 LCE1BQ5T7P3 118 aa4.55□□□□□ -1.68
CHPT1-202ENST00000546490 BRK1Q8WUW1 75 aa4.49□□□□□ -1.69
CHPT1-202ENST00000546490 LCE1CQ5T751 118 aa4.47□□□□□ -1.69
CHPT1-202ENST00000546490 PMAIP1Q13794 54 aa4.18□□□□□ -1.74
CHPT1-202ENST00000546490 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
CHPT1-202ENST00000546490 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
CHPT1-202ENST00000546490 PRAC1Q96KF2 57 aa4.09□□□□□ -1.75
CHPT1-202ENST00000546490 KRTAP5-11Q6L8G4 156 aa4.08□□□□□ -1.76
CHPT1-202ENST00000546490 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
CHPT1-202ENST00000546490 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
CHPT1-202ENST00000546490 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
CHPT1-202ENST00000546490 PHGR1C9JFL3 82 aa3.71□□□□□ -1.82
CHPT1-202ENST00000546490 KRTAP21-2Q3LI59 83 aa3.7□□□□□ -1.82
CHPT1-202ENST00000546490 PRO0628Q9UI54 55 aa3.61□□□□□ -1.83
CHPT1-202ENST00000546490 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
CHPT1-202ENST00000546490 KTN1-AS1Q86SY8 53 aa3.56□□□□□ -1.84
CHPT1-202ENST00000546490 SVIPQ8NHG7 77 aa3.5□□□□□ -1.85
CHPT1-202ENST00000546490 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
CHPT1-202ENST00000546490 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
CHPT1-202ENST00000546490 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
CHPT1-202ENST00000546490 PRM1P04553 51 aa2.78□□□□□ -1.96
CHPT1-202ENST00000546490 NDUFAF8A1L188 74 aa2.5□□□□□ -2.01
CHPT1-202ENST00000546490 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
CHPT1-202ENST00000546490 A0A0A0MQY5 61 aa2.06□□□□□ -2.08
CHPT1-202ENST00000546490 H3BS24 57 aa2□□□□□ -2.09
CHPT1-202ENST00000546490 INE1O15225 51 aa1.99□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 85.4 ms