RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 KMT2DO14686 5537 aa2.85□□□□□ -1.95
UBR1-202ENST00000546274 KRTAP19-5Q3LI72 72 aa2.84□□□□□ -1.95
UBR1-202ENST00000546274 LCE3CQ5T5A8 94 aa2.81□□□□□ -1.96
UBR1-202ENST00000546274 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
UBR1-202ENST00000546274 SSPOA2VEC9 5147 aa2.79□□□□□ -1.96
UBR1-202ENST00000546274 KRTAP4-8A0A0G2JLE6 195 aa2.78□□□□□ -1.96
UBR1-202ENST00000546274 KRTAP2-3P0C7H8 128 aa2.76□□□□□ -1.97
UBR1-202ENST00000546274 KRTAP2-4Q9BYR9 128 aa2.76□□□□□ -1.97
UBR1-202ENST00000546274 KRTAP2-1Q9BYU5 128 aa2.76□□□□□ -1.97
UBR1-202ENST00000546274 FSIP2Q5CZC0 6907 aa2.76□□□□□ -1.97
UBR1-202ENST00000546274 FCGBPQ9Y6R7 5405 aaPredicted RBP2.74□□□□□ -1.97
UBR1-202ENST00000546274 KRTAP19-7Q3SYF9 63 aa2.73□□□□□ -1.97
UBR1-202ENST00000546274 KRTAP6-3Q3LI67 103 aa2.71□□□□□ -1.98
UBR1-202ENST00000546274 KRTAP12-4P60329 112 aa2.69□□□□□ -1.98
UBR1-202ENST00000546274 KRTAP4-7Q9BYR0 210 aa2.69□□□□□ -1.98
UBR1-202ENST00000546274 MT1LQ93083 61 aa2.64□□□□□ -1.99
UBR1-202ENST00000546274 MT1EP04732 61 aa2.63□□□□□ -1.99
UBR1-202ENST00000546274 KRTAP5-9P26371 169 aa2.61□□□□□ -1.99
UBR1-202ENST00000546274 LCE1DQ5T752 114 aa2.6□□□□□ -1.99
UBR1-202ENST00000546274 MACF1Q9UPN3 7388 aaKnown RBP2.6□□□□□ -1.99
UBR1-202ENST00000546274 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
UBR1-202ENST00000546274 LCE1AQ5T7P2 110 aa2.57□□□□□ -2
UBR1-202ENST00000546274 SPRR2FQ96RM1 72 aa2.52□□□□□ -2.01
UBR1-202ENST00000546274 KRTAP4-3Q9BYR4 195 aa2.51□□□□□ -2.01
UBR1-202ENST00000546274 SYNE2Q8WXH0 6885 aaKnown RBP2.51□□□□□ -2.01
UBR1-202ENST00000546274 KRTAP4-11Q9BYQ6 195 aa2.49□□□□□ -2.01
UBR1-202ENST00000546274 SPRR2EP22531 72 aa2.47□□□□□ -2.01
UBR1-202ENST00000546274 SPRR2BP35325 72 aa2.47□□□□□ -2.01
UBR1-202ENST00000546274 SPRR2AP35326 72 aa2.47□□□□□ -2.01
UBR1-202ENST00000546274 MUC12Q9UKN1 5478 aa2.47□□□□□ -2.01
UBR1-202ENST00000546274 KRTAP20-1Q3LI63 56 aa2.46□□□□□ -2.02
UBR1-202ENST00000546274 NEBP20929 6669 aa2.46□□□□□ -2.02
UBR1-202ENST00000546274 MT1GP13640 62 aa2.45□□□□□ -2.02
UBR1-202ENST00000546274 SYNE1Q8NF91 8797 aaKnown RBP2.45□□□□□ -2.02
UBR1-202ENST00000546274 MT1MQ8N339 61 aa2.45□□□□□ -2.02
UBR1-202ENST00000546274 KRTAP4-9Q9BYQ8 210 aa2.45□□□□□ -2.02
UBR1-202ENST00000546274 PRM1P04553 51 aa2.44□□□□□ -2.02
UBR1-202ENST00000546274 KRTAP19-3Q7Z4W3 81 aa2.43□□□□□ -2.02
UBR1-202ENST00000546274 KRTAP2-2Q9BYT5 123 aa2.43□□□□□ -2.02
UBR1-202ENST00000546274 OBSCNQ5VST9 7968 aa2.41□□□□□ -2.02
UBR1-202ENST00000546274 SPRR2DP22532 72 aa2.4□□□□□ -2.02
UBR1-202ENST00000546274 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.02
UBR1-202ENST00000546274 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
UBR1-202ENST00000546274 DSTQ03001 7570 aaKnown RBP2.37□□□□□ -2.03
UBR1-202ENST00000546274 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
UBR1-202ENST00000546274 MDN1Q9NU22 5596 aa2.32□□□□□ -2.04
UBR1-202ENST00000546274 KRTAP5-5Q701N2 237 aaPredicted RBP2.29□□□□□ -2.04
UBR1-202ENST00000546274 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
UBR1-202ENST00000546274 KRTAP6-1Q3LI64 71 aa2.24□□□□□ -2.05
UBR1-202ENST00000546274 MT1AP04731 61 aa2.23□□□□□ -2.05
UBR1-202ENST00000546274 MT3P25713 68 aa2.19□□□□□ -2.06
UBR1-202ENST00000546274 KRTAP6-2Q3LI66 62 aa2.19□□□□□ -2.06
UBR1-202ENST00000546274 KRTAP5-3Q6L8H2 238 aa2.18□□□□□ -2.06
UBR1-202ENST00000546274 KRTAP5-4Q6L8H1 288 aa2.12□□□□□ -2.07
UBR1-202ENST00000546274 MT4P47944 62 aa2.04□□□□□ -2.08
UBR1-202ENST00000546274 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
UBR1-202ENST00000546274 KRTAP20-2Q3LI61 65 aa1.97□□□□□ -2.09
UBR1-202ENST00000546274 HMCN1Q96RW7 5635 aa1.95□□□□□ -2.1
UBR1-202ENST00000546274 GPR98Q8WXG9 6306 aa1.94□□□□□ -2.1
UBR1-202ENST00000546274 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.11
UBR1-202ENST00000546274 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
UBR1-202ENST00000546274 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
UBR1-202ENST00000546274 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
UBR1-202ENST00000546274 MUC5BQ9HC84 5762 aaPredicted RBP1.82□□□□□ -2.12
UBR1-202ENST00000546274 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.12
UBR1-202ENST00000546274 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
UBR1-202ENST00000546274 KRTAP5-8O75690 187 aa1.71□□□□□ -2.14
UBR1-202ENST00000546274 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
UBR1-202ENST00000546274 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
UBR1-202ENST00000546274 KRTAP5-1Q6L8H4 278 aa1.63□□□□□ -2.15
UBR1-202ENST00000546274 LCE1CQ5T751 118 aa1.58□□□□□ -2.16
UBR1-202ENST00000546274 LCE1BQ5T7P3 118 aa1.58□□□□□ -2.16
UBR1-202ENST00000546274 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
UBR1-202ENST00000546274 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
UBR1-202ENST00000546274 KRTAP4-4Q9BYR3 166 aa1.37□□□□□ -2.19
UBR1-202ENST00000546274 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
UBR1-202ENST00000546274 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 131.4 ms