RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 CSAG1Q6PB30 78 aa1.58□□□□□ -2.16
CUL3-215ENST00000546102 KRTAP4-1Q9BYQ7 146 aa1.58□□□□□ -2.16
CUL3-215ENST00000546102 MIR22HGQ0VDD5 57 aa1.57□□□□□ -2.16
CUL3-215ENST00000546102 H0YAA0 97 aa1.56□□□□□ -2.16
CUL3-215ENST00000546102 UQCR11O14957 56 aa1.56□□□□□ -2.16
CUL3-215ENST00000546102 KRTAP13-4Q3LI77 160 aa1.55□□□□□ -2.16
CUL3-215ENST00000546102 M0R2T5 61 aa1.54□□□□□ -2.16
CUL3-215ENST00000546102 CDC42SE1Q9NRR8 79 aa1.54□□□□□ -2.16
CUL3-215ENST00000546102 A6NN06 94 aa1.53□□□□□ -2.16
CUL3-215ENST00000546102 KRTAP19-2Q3LHN2 52 aa1.53□□□□□ -2.16
CUL3-215ENST00000546102 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
CUL3-215ENST00000546102 M0QZ58 72 aa1.51□□□□□ -2.17
CUL3-215ENST00000546102 SPATA8Q6RVD6 105 aa1.51□□□□□ -2.17
CUL3-215ENST00000546102 KRTAP12-1P59990 96 aa1.5□□□□□ -2.17
CUL3-215ENST00000546102 MT1HP80294 61 aa1.5□□□□□ -2.17
CUL3-215ENST00000546102 CRIPTQ9P021 101 aa1.5□□□□□ -2.17
CUL3-215ENST00000546102 KRTAP6-3Q3LI67 103 aa1.49□□□□□ -2.17
CUL3-215ENST00000546102 A0A0D9SG42 100 aa1.48□□□□□ -2.17
CUL3-215ENST00000546102 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
CUL3-215ENST00000546102 INE1O15225 51 aa1.45□□□□□ -2.18
CUL3-215ENST00000546102 MT2AP02795 61 aa1.44□□□□□ -2.18
CUL3-215ENST00000546102 MT1FP04733 61 aa1.43□□□□□ -2.18
CUL3-215ENST00000546102 SPRR2GQ9BYE4 73 aa1.43□□□□□ -2.18
CUL3-215ENST00000546102 PLAC4Q8WY50 150 aa1.42□□□□□ -2.18
CUL3-215ENST00000546102 USH2AO75445 5202 aa1.4□□□□□ -2.19
CUL3-215ENST00000546102 KRTAP12-3P60328 96 aa1.38□□□□□ -2.19
CUL3-215ENST00000546102 KRTAP19-8Q3LI54 63 aa1.38□□□□□ -2.19
CUL3-215ENST00000546102 MT1BP07438 61 aa1.35□□□□□ -2.19
CUL3-215ENST00000546102 TNP1P09430 55 aa1.35□□□□□ -2.19
CUL3-215ENST00000546102 SSPOA2VEC9 5147 aa1.33□□□□□ -2.2
CUL3-215ENST00000546102 C10orf95Q9H7T3 257 aa1.33□□□□□ -2.2
CUL3-215ENST00000546102 MT1XP80297 61 aa1.32□□□□□ -2.2
CUL3-215ENST00000546102 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
CUL3-215ENST00000546102 KMT2DO14686 5537 aa1.29□□□□□ -2.2
CUL3-215ENST00000546102 FSIP2Q5CZC0 6907 aa1.29□□□□□ -2.2
CUL3-215ENST00000546102 FCGBPQ9Y6R7 5405 aaPredicted RBP1.28□□□□□ -2.2
CUL3-215ENST00000546102 KRTAP19-6Q3LI70 58 aa1.27□□□□□ -2.21
CUL3-215ENST00000546102 MACF1Q9UPN3 7388 aaKnown RBP1.26□□□□□ -2.21
CUL3-215ENST00000546102 KRTAP12-4P60329 112 aa1.26□□□□□ -2.21
CUL3-215ENST00000546102 KRTAP8-1Q8IUC2 63 aa1.23□□□□□ -2.21
CUL3-215ENST00000546102 CRCT1Q9UGL9 99 aa1.22□□□□□ -2.21
CUL3-215ENST00000546102 MDN1Q9NU22 5596 aa1.21□□□□□ -2.22
CUL3-215ENST00000546102 MUC12Q9UKN1 5478 aa1.2□□□□□ -2.22
CUL3-215ENST00000546102 SYNE2Q8WXH0 6885 aaKnown RBP1.2□□□□□ -2.22
CUL3-215ENST00000546102 KRTAP19-5Q3LI72 72 aa1.19□□□□□ -2.22
CUL3-215ENST00000546102 MT1EP04732 61 aa1.16□□□□□ -2.22
CUL3-215ENST00000546102 KRTAP19-7Q3SYF9 63 aa1.16□□□□□ -2.22
CUL3-215ENST00000546102 SPRR2FQ96RM1 72 aa1.15□□□□□ -2.23
CUL3-215ENST00000546102 MT1LQ93083 61 aa1.14□□□□□ -2.23
CUL3-215ENST00000546102 NEBP20929 6669 aa1.12□□□□□ -2.23
CUL3-215ENST00000546102 KRTAP19-3Q7Z4W3 81 aa1.12□□□□□ -2.23
CUL3-215ENST00000546102 MT1GP13640 62 aa1.1□□□□□ -2.23
CUL3-215ENST00000546102 SPRR2EP22531 72 aa1.09□□□□□ -2.23
CUL3-215ENST00000546102 SPRR2BP35325 72 aa1.09□□□□□ -2.23
CUL3-215ENST00000546102 SPRR2AP35326 72 aa1.09□□□□□ -2.23
CUL3-215ENST00000546102 MT1MQ8N339 61 aa1.09□□□□□ -2.23
CUL3-215ENST00000546102 DSTQ03001 7570 aaKnown RBP1.07□□□□□ -2.24
CUL3-215ENST00000546102 SPRR2DP22532 72 aa1.06□□□□□ -2.24
CUL3-215ENST00000546102 MUC5BQ9HC84 5762 aaPredicted RBP1□□□□□ -2.25
CUL3-215ENST00000546102 KRTAP2-3P0C7H8 128 aa0.98□□□□□ -2.25
CUL3-215ENST00000546102 KRTAP2-4Q9BYR9 128 aa0.98□□□□□ -2.25
CUL3-215ENST00000546102 KRTAP2-1Q9BYU5 128 aa0.98□□□□□ -2.25
CUL3-215ENST00000546102 MT1AP04731 61 aa0.97□□□□□ -2.25
CUL3-215ENST00000546102 KRTAP20-1Q3LI63 56 aa0.96□□□□□ -2.26
CUL3-215ENST00000546102 KRTAP6-1Q3LI64 71 aa0.94□□□□□ -2.26
CUL3-215ENST00000546102 MT4P47944 62 aa0.9□□□□□ -2.27
CUL3-215ENST00000546102 SYNE1Q8NF91 8797 aaKnown RBP0.9□□□□□ -2.27
CUL3-215ENST00000546102 AHNAKQ09666 5890 aaKnown RBP0.89□□□□□ -2.27
CUL3-215ENST00000546102 KRTAP6-2Q3LI66 62 aa0.88□□□□□ -2.27
CUL3-215ENST00000546102 KRTAP20-2Q3LI61 65 aa0.87□□□□□ -2.27
CUL3-215ENST00000546102 AHNAK2Q8IVF2 5795 aa0.87□□□□□ -2.27
CUL3-215ENST00000546102 GPR98Q8WXG9 6306 aa0.84□□□□□ -2.27
CUL3-215ENST00000546102 MUC5ACP98088 5654 aa0.8□□□□□ -2.28
CUL3-215ENST00000546102 KRTAP5-10Q6L8G5 202 aa0.73□□□□□ -2.29
CUL3-215ENST00000546102 PRM1P04553 51 aa0.72□□□□□ -2.29
CUL3-215ENST00000546102 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
CUL3-215ENST00000546102 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
CUL3-215ENST00000546102 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms