RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 SPRR2FQ96RM1 72 aa3.43□□□□□ -1.86
TRAF1-203ENST00000546084 MT1GP13640 62 aa3.42□□□□□ -1.86
TRAF1-203ENST00000546084 LOC100996750A0A140TA64 210 aa3.41□□□□□ -1.86
TRAF1-203ENST00000546084 LCE2DQ5TA82 110 aaPredicted RBP3.41□□□□□ -1.86
TRAF1-203ENST00000546084 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
TRAF1-203ENST00000546084 KRTAP19-7Q3SYF9 63 aa3.32□□□□□ -1.88
TRAF1-203ENST00000546084 KRTAP9-6A0A140TA67 174 aa3.32□□□□□ -1.88
TRAF1-203ENST00000546084 LCE3BQ5TA77 95 aa3.29□□□□□ -1.88
TRAF1-203ENST00000546084 MT1LQ93083 61 aa3.29□□□□□ -1.88
TRAF1-203ENST00000546084 MACF1Q9UPN3 7388 aaKnown RBP3.28□□□□□ -1.88
TRAF1-203ENST00000546084 MT1EP04732 61 aa3.27□□□□□ -1.89
TRAF1-203ENST00000546084 KRTAP2-3P0C7H8 128 aa3.24□□□□□ -1.89
TRAF1-203ENST00000546084 KRTAP2-4Q9BYR9 128 aa3.24□□□□□ -1.89
TRAF1-203ENST00000546084 KRTAP2-1Q9BYU5 128 aa3.24□□□□□ -1.89
TRAF1-203ENST00000546084 KRTAP12-4P60329 112 aa3.21□□□□□ -1.89
TRAF1-203ENST00000546084 KRTAP4-9Q9BYQ8 210 aa3.18□□□□□ -1.9
TRAF1-203ENST00000546084 KRTAP19-3Q7Z4W3 81 aa3.13□□□□□ -1.91
TRAF1-203ENST00000546084 MDN1Q9NU22 5596 aa3.12□□□□□ -1.91
TRAF1-203ENST00000546084 KRTAP19-4Q3LI73 84 aa3.11□□□□□ -1.91
TRAF1-203ENST00000546084 MT1MQ8N339 61 aa3.11□□□□□ -1.91
TRAF1-203ENST00000546084 KRTAP19-6Q3LI70 58 aa3.1□□□□□ -1.91
TRAF1-203ENST00000546084 SPRR2EP22531 72 aa3.06□□□□□ -1.92
TRAF1-203ENST00000546084 SPRR2BP35325 72 aa3.06□□□□□ -1.92
TRAF1-203ENST00000546084 SPRR2AP35326 72 aa3.06□□□□□ -1.92
TRAF1-203ENST00000546084 KRTAP9-7A8MTY7 169 aa3.03□□□□□ -1.92
TRAF1-203ENST00000546084 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.96□□□□□ -1.94
TRAF1-203ENST00000546084 LCE1AQ5T7P2 110 aa2.93□□□□□ -1.94
TRAF1-203ENST00000546084 KRTAP2-2Q9BYT5 123 aa2.92□□□□□ -1.94
TRAF1-203ENST00000546084 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
TRAF1-203ENST00000546084 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
TRAF1-203ENST00000546084 PRM1P04553 51 aa2.9□□□□□ -1.95
TRAF1-203ENST00000546084 SPRR2DP22532 72 aa2.9□□□□□ -1.95
TRAF1-203ENST00000546084 KRTAP6-1Q3LI64 71 aa2.9□□□□□ -1.95
TRAF1-203ENST00000546084 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
TRAF1-203ENST00000546084 LCE5AQ5TCM9 118 aa2.85□□□□□ -1.95
TRAF1-203ENST00000546084 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
TRAF1-203ENST00000546084 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
TRAF1-203ENST00000546084 MT4P47944 62 aa2.79□□□□□ -1.96
TRAF1-203ENST00000546084 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
TRAF1-203ENST00000546084 LCE1DQ5T752 114 aa2.74□□□□□ -1.97
TRAF1-203ENST00000546084 MT1AP04731 61 aa2.71□□□□□ -1.97
TRAF1-203ENST00000546084 KRTAP6-2Q3LI66 62 aa2.7□□□□□ -1.98
TRAF1-203ENST00000546084 KRTAP5-9P26371 169 aa2.69□□□□□ -1.98
TRAF1-203ENST00000546084 NEBP20929 6669 aa2.69□□□□□ -1.98
TRAF1-203ENST00000546084 KRTAP20-1Q3LI63 56 aa2.65□□□□□ -1.99
TRAF1-203ENST00000546084 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
TRAF1-203ENST00000546084 MT3P25713 68 aa2.6□□□□□ -1.99
TRAF1-203ENST00000546084 KRTAP9-4Q9BYQ2 154 aa2.56□□□□□ -2
TRAF1-203ENST00000546084 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
TRAF1-203ENST00000546084 KRTAP4-6Q9BYQ5 205 aa2.51□□□□□ -2.01
TRAF1-203ENST00000546084 GPR98Q8WXG9 6306 aa2.42□□□□□ -2.02
TRAF1-203ENST00000546084 KRTAP9-9Q9BYP9 154 aa2.41□□□□□ -2.02
TRAF1-203ENST00000546084 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
TRAF1-203ENST00000546084 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
TRAF1-203ENST00000546084 LCE4AQ5TA78 99 aa2.37□□□□□ -2.03
TRAF1-203ENST00000546084 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
TRAF1-203ENST00000546084 KRTAP4-11Q9BYQ6 195 aa2.21□□□□□ -2.06
TRAF1-203ENST00000546084 KRTAP5-4Q6L8H1 288 aa2.2□□□□□ -2.06
TRAF1-203ENST00000546084 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
TRAF1-203ENST00000546084 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
TRAF1-203ENST00000546084 KRTAP5-3Q6L8H2 238 aa2.04□□□□□ -2.08
TRAF1-203ENST00000546084 KRTAP4-12Q9BQ66 201 aa2.04□□□□□ -2.08
TRAF1-203ENST00000546084 KRTAP4-2Q9BYR5 136 aa2.04□□□□□ -2.08
TRAF1-203ENST00000546084 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
TRAF1-203ENST00000546084 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
TRAF1-203ENST00000546084 KRTAP5-10Q6L8G5 202 aa1.95□□□□□ -2.1
TRAF1-203ENST00000546084 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
TRAF1-203ENST00000546084 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
TRAF1-203ENST00000546084 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
TRAF1-203ENST00000546084 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
TRAF1-203ENST00000546084 KRTAP5-1Q6L8H4 278 aa1.8□□□□□ -2.12
TRAF1-203ENST00000546084 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
TRAF1-203ENST00000546084 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
TRAF1-203ENST00000546084 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.58□□□□□ -2.16
TRAF1-203ENST00000546084 KRTAP5-11Q6L8G4 156 aa1.49□□□□□ -2.17
TRAF1-203ENST00000546084 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
TRAF1-203ENST00000546084 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 41.7 ms