RNA–Protein interactions for RNA: ENST00000546079.5

CLPTM1-203, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-203ENST00000546079 MT1EP04732 61 aa5.42□□□□□ -1.54
CLPTM1-203ENST00000546079 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
CLPTM1-203ENST00000546079 FCGBPQ9Y6R7 5405 aaPredicted RBP5.33□□□□□ -1.56
CLPTM1-203ENST00000546079 LOC100996750A0A140TA64 210 aa5.23□□□□□ -1.57
CLPTM1-203ENST00000546079 MT1GP13640 62 aa5.15□□□□□ -1.58
CLPTM1-203ENST00000546079 KRTAP9-2Q9BYQ4 174 aa5.14□□□□□ -1.59
CLPTM1-203ENST00000546079 KRTAP19-3Q7Z4W3 81 aa5.13□□□□□ -1.59
CLPTM1-203ENST00000546079 KRTAP4-3Q9BYR4 195 aa5.13□□□□□ -1.59
CLPTM1-203ENST00000546079 MUC12Q9UKN1 5478 aa5.11□□□□□ -1.59
CLPTM1-203ENST00000546079 MT1MQ8N339 61 aa5.08□□□□□ -1.6
CLPTM1-203ENST00000546079 SPRR2FQ96RM1 72 aa5.06□□□□□ -1.6
CLPTM1-203ENST00000546079 MACF1Q9UPN3 7388 aaKnown RBP5.04□□□□□ -1.6
CLPTM1-203ENST00000546079 LCE5AQ5TCM9 118 aa5.01□□□□□ -1.61
CLPTM1-203ENST00000546079 CRCT1Q9UGL9 99 aa5□□□□□ -1.61
CLPTM1-203ENST00000546079 MT1AP04731 61 aa4.93□□□□□ -1.62
CLPTM1-203ENST00000546079 KRTAP5-9P26371 169 aa4.89□□□□□ -1.63
CLPTM1-203ENST00000546079 LCE3BQ5TA77 95 aa4.89□□□□□ -1.63
CLPTM1-203ENST00000546079 SYNE2Q8WXH0 6885 aaKnown RBP4.88□□□□□ -1.63
CLPTM1-203ENST00000546079 KRTAP4-9Q9BYQ8 210 aa4.86□□□□□ -1.63
CLPTM1-203ENST00000546079 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
CLPTM1-203ENST00000546079 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
CLPTM1-203ENST00000546079 LCE3EQ5T5B0 92 aa4.79□□□□□ -1.64
CLPTM1-203ENST00000546079 DSTQ03001 7570 aaKnown RBP4.79□□□□□ -1.64
CLPTM1-203ENST00000546079 PRM1P04553 51 aa4.79□□□□□ -1.64
CLPTM1-203ENST00000546079 KRTAP5-5Q701N2 237 aaPredicted RBP4.79□□□□□ -1.64
CLPTM1-203ENST00000546079 KRTAP9-7A8MTY7 169 aa4.77□□□□□ -1.65
CLPTM1-203ENST00000546079 MDN1Q9NU22 5596 aa4.73□□□□□ -1.65
CLPTM1-203ENST00000546079 SYNE1Q8NF91 8797 aaKnown RBP4.72□□□□□ -1.65
CLPTM1-203ENST00000546079 KRTAP2-2Q9BYT5 123 aa4.72□□□□□ -1.65
CLPTM1-203ENST00000546079 SPRR2EP22531 72 aa4.69□□□□□ -1.66
CLPTM1-203ENST00000546079 SPRR2BP35325 72 aa4.69□□□□□ -1.66
CLPTM1-203ENST00000546079 SPRR2AP35326 72 aa4.69□□□□□ -1.66
CLPTM1-203ENST00000546079 KRTAP6-1Q3LI64 71 aa4.67□□□□□ -1.66
CLPTM1-203ENST00000546079 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.63□□□□□ -1.67
CLPTM1-203ENST00000546079 KRTAP6-3Q3LI67 103 aa4.6□□□□□ -1.67
CLPTM1-203ENST00000546079 KRTAP9-6A0A140TA67 174 aa4.57□□□□□ -1.68
CLPTM1-203ENST00000546079 SPRR2DP22532 72 aa4.5□□□□□ -1.69
CLPTM1-203ENST00000546079 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
CLPTM1-203ENST00000546079 KRTAP9-4Q9BYQ2 154 aa4.3□□□□□ -1.72
CLPTM1-203ENST00000546079 NEBP20929 6669 aa4.24□□□□□ -1.73
CLPTM1-203ENST00000546079 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
CLPTM1-203ENST00000546079 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
CLPTM1-203ENST00000546079 MT3P25713 68 aa4.11□□□□□ -1.75
CLPTM1-203ENST00000546079 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
CLPTM1-203ENST00000546079 LCE1DQ5T752 114 aa4.01□□□□□ -1.77
CLPTM1-203ENST00000546079 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
CLPTM1-203ENST00000546079 KRTAP4-6Q9BYQ5 205 aa3.98□□□□□ -1.77
CLPTM1-203ENST00000546079 LCE4AQ5TA78 99 aa3.95□□□□□ -1.78
CLPTM1-203ENST00000546079 MT4P47944 62 aa3.94□□□□□ -1.78
CLPTM1-203ENST00000546079 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
CLPTM1-203ENST00000546079 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
CLPTM1-203ENST00000546079 KRTAP20-1Q3LI63 56 aa3.76□□□□□ -1.81
CLPTM1-203ENST00000546079 HMCN1Q96RW7 5635 aa3.76□□□□□ -1.81
CLPTM1-203ENST00000546079 KRTAP5-3Q6L8H2 238 aa3.74□□□□□ -1.81
CLPTM1-203ENST00000546079 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.82
CLPTM1-203ENST00000546079 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
CLPTM1-203ENST00000546079 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
CLPTM1-203ENST00000546079 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
CLPTM1-203ENST00000546079 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
CLPTM1-203ENST00000546079 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
CLPTM1-203ENST00000546079 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
CLPTM1-203ENST00000546079 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
CLPTM1-203ENST00000546079 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
CLPTM1-203ENST00000546079 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
CLPTM1-203ENST00000546079 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
CLPTM1-203ENST00000546079 KRTAP21-1Q3LI58 79 aa3.11□□□□□ -1.91
CLPTM1-203ENST00000546079 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
CLPTM1-203ENST00000546079 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
CLPTM1-203ENST00000546079 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
CLPTM1-203ENST00000546079 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
CLPTM1-203ENST00000546079 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
CLPTM1-203ENST00000546079 AHNAKQ09666 5890 aaKnown RBP2.8□□□□□ -1.96
CLPTM1-203ENST00000546079 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
CLPTM1-203ENST00000546079 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
CLPTM1-203ENST00000546079 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
CLPTM1-203ENST00000546079 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
CLPTM1-203ENST00000546079 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 70.1 ms