RNA–Protein interactions for RNA: ENST00000545380.5

CADM1-218, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-218ENST00000545380 MT1LQ93083 61 aa6.04□□□□□ -1.44
CADM1-218ENST00000545380 KRTAP9-6A8MVA2 160 aa5.98□□□□□ -1.45
CADM1-218ENST00000545380 MACF1Q9UPN3 7388 aaKnown RBP5.94□□□□□ -1.46
CADM1-218ENST00000545380 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.91□□□□□ -1.46
CADM1-218ENST00000545380 KRTAP4-7Q9BYR0 210 aa5.88□□□□□ -1.47
CADM1-218ENST00000545380 KRTAP2-3P0C7H8 128 aa5.85□□□□□ -1.47
CADM1-218ENST00000545380 KRTAP2-4Q9BYR9 128 aa5.85□□□□□ -1.47
CADM1-218ENST00000545380 KRTAP2-1Q9BYU5 128 aa5.85□□□□□ -1.47
CADM1-218ENST00000545380 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
CADM1-218ENST00000545380 MT1GP13640 62 aa5.73□□□□□ -1.49
CADM1-218ENST00000545380 KRTAP19-3Q7Z4W3 81 aa5.73□□□□□ -1.49
CADM1-218ENST00000545380 KRTAP9-7A8MTY7 169 aa5.7□□□□□ -1.5
CADM1-218ENST00000545380 MT1MQ8N339 61 aa5.67□□□□□ -1.5
CADM1-218ENST00000545380 KRTAP6-3Q3LI67 103 aa5.64□□□□□ -1.51
CADM1-218ENST00000545380 SPRR2FQ96RM1 72 aa5.58□□□□□ -1.52
CADM1-218ENST00000545380 KRTAP5-9P26371 169 aa5.57□□□□□ -1.52
CADM1-218ENST00000545380 LCE5AQ5TCM9 118 aa5.55□□□□□ -1.52
CADM1-218ENST00000545380 KRTAP4-3Q9BYR4 195 aa5.55□□□□□ -1.52
CADM1-218ENST00000545380 MUC12Q9UKN1 5478 aa5.54□□□□□ -1.52
CADM1-218ENST00000545380 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
CADM1-218ENST00000545380 MDN1Q9NU22 5596 aa5.45□□□□□ -1.54
CADM1-218ENST00000545380 SPRR2EP22531 72 aa5.38□□□□□ -1.55
CADM1-218ENST00000545380 SPRR2BP35325 72 aa5.38□□□□□ -1.55
CADM1-218ENST00000545380 SPRR2AP35326 72 aa5.38□□□□□ -1.55
CADM1-218ENST00000545380 LCE1AQ5T7P2 110 aa5.35□□□□□ -1.55
CADM1-218ENST00000545380 NEBP20929 6669 aa5.33□□□□□ -1.56
CADM1-218ENST00000545380 SPRR2DP22532 72 aa5.19□□□□□ -1.58
CADM1-218ENST00000545380 MT1AP04731 61 aa5.14□□□□□ -1.59
CADM1-218ENST00000545380 KRTAP5-5Q701N2 237 aaPredicted RBP5.08□□□□□ -1.6
CADM1-218ENST00000545380 KRTAP6-1Q3LI64 71 aa5.07□□□□□ -1.6
CADM1-218ENST00000545380 LCE3BQ5TA77 95 aa5.07□□□□□ -1.6
CADM1-218ENST00000545380 KRTAP12-4P60329 112 aa5.06□□□□□ -1.6
CADM1-218ENST00000545380 DSTQ03001 7570 aaKnown RBP5.05□□□□□ -1.6
CADM1-218ENST00000545380 KRTAP20-1Q3LI63 56 aa5.04□□□□□ -1.6
CADM1-218ENST00000545380 KRTAP2-2Q9BYT5 123 aa4.89□□□□□ -1.63
CADM1-218ENST00000545380 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
CADM1-218ENST00000545380 KRTAP4-9Q9BYQ8 210 aa4.85□□□□□ -1.63
CADM1-218ENST00000545380 KRTAP9-4Q9BYQ2 154 aa4.83□□□□□ -1.64
CADM1-218ENST00000545380 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
CADM1-218ENST00000545380 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
CADM1-218ENST00000545380 MT3P25713 68 aa4.63□□□□□ -1.67
CADM1-218ENST00000545380 KRTAP5-4Q6L8H1 288 aa4.57□□□□□ -1.68
CADM1-218ENST00000545380 LCE4AQ5TA78 99 aa4.56□□□□□ -1.68
CADM1-218ENST00000545380 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
CADM1-218ENST00000545380 MT4P47944 62 aa4.54□□□□□ -1.68
CADM1-218ENST00000545380 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
CADM1-218ENST00000545380 KRTAP4-6Q9BYQ5 205 aa4.45□□□□□ -1.7
CADM1-218ENST00000545380 PRM1P04553 51 aa4.44□□□□□ -1.7
CADM1-218ENST00000545380 HMCN1Q96RW7 5635 aa4.43□□□□□ -1.7
CADM1-218ENST00000545380 KRTAP20-2Q3LI61 65 aa4.31□□□□□ -1.72
CADM1-218ENST00000545380 KRTAP5-2Q701N4 177 aa4.25□□□□□ -1.73
CADM1-218ENST00000545380 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
CADM1-218ENST00000545380 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.75
CADM1-218ENST00000545380 KRTAP4-12Q9BQ66 201 aa4.12□□□□□ -1.75
CADM1-218ENST00000545380 AHNAK2Q8IVF2 5795 aa4.07□□□□□ -1.76
CADM1-218ENST00000545380 GPR98Q8WXG9 6306 aa4.01□□□□□ -1.77
CADM1-218ENST00000545380 KRTAP5-10Q6L8G5 202 aa3.91□□□□□ -1.78
CADM1-218ENST00000545380 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
CADM1-218ENST00000545380 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
CADM1-218ENST00000545380 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
CADM1-218ENST00000545380 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
CADM1-218ENST00000545380 KRTAP5-8O75690 187 aa3.68□□□□□ -1.82
CADM1-218ENST00000545380 KRTAP5-7Q6L8G8 165 aa3.67□□□□□ -1.82
CADM1-218ENST00000545380 LCE1CQ5T751 118 aa3.64□□□□□ -1.83
CADM1-218ENST00000545380 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
CADM1-218ENST00000545380 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
CADM1-218ENST00000545380 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.84
CADM1-218ENST00000545380 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
CADM1-218ENST00000545380 KRTAP21-2Q3LI59 83 aa3.32□□□□□ -1.88
CADM1-218ENST00000545380 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
CADM1-218ENST00000545380 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
CADM1-218ENST00000545380 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
CADM1-218ENST00000545380 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
CADM1-218ENST00000545380 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
CADM1-218ENST00000545380 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
CADM1-218ENST00000545380 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
CADM1-218ENST00000545380 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
CADM1-218ENST00000545380 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 124.7 ms