RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 MACF1Q9UPN3 7388 aaKnown RBP6.85□□□□□ -1.31
LYSMD4-210ENST00000545021 KRTAP5-9P26371 169 aa6.76□□□□□ -1.33
LYSMD4-210ENST00000545021 SYNE2Q8WXH0 6885 aaKnown RBP6.67□□□□□ -1.34
LYSMD4-210ENST00000545021 NEBP20929 6669 aa6.61□□□□□ -1.35
LYSMD4-210ENST00000545021 KRTAP19-4Q3LI73 84 aa6.52□□□□□ -1.37
LYSMD4-210ENST00000545021 KRTAP4-7Q9BYR0 210 aa6.46□□□□□ -1.38
LYSMD4-210ENST00000545021 KRTAP20-1Q3LI63 56 aa6.4□□□□□ -1.38
LYSMD4-210ENST00000545021 SPRR2FQ96RM1 72 aa6.4□□□□□ -1.39
LYSMD4-210ENST00000545021 KRTAP19-7Q3SYF9 63 aa6.38□□□□□ -1.39
LYSMD4-210ENST00000545021 KRTAP4-8A0A0G2JLE6 195 aa6.37□□□□□ -1.39
LYSMD4-210ENST00000545021 KRTAP4-8Q9BYQ9 185 aa6.37□□□□□ -1.39
LYSMD4-210ENST00000545021 KMT2DO14686 5537 aa6.37□□□□□ -1.39
LYSMD4-210ENST00000545021 SPRR2EP22531 72 aa6.33□□□□□ -1.4
LYSMD4-210ENST00000545021 SPRR2BP35325 72 aa6.33□□□□□ -1.4
LYSMD4-210ENST00000545021 SPRR2AP35326 72 aa6.33□□□□□ -1.4
LYSMD4-210ENST00000545021 KRTAP12-4P60329 112 aa6.31□□□□□ -1.4
LYSMD4-210ENST00000545021 LCE1AQ5T7P2 110 aa6.31□□□□□ -1.4
LYSMD4-210ENST00000545021 MUC12Q9UKN1 5478 aa6.3□□□□□ -1.4
LYSMD4-210ENST00000545021 MT1LQ93083 61 aa6.27□□□□□ -1.41
LYSMD4-210ENST00000545021 MDN1Q9NU22 5596 aa6.19□□□□□ -1.42
LYSMD4-210ENST00000545021 MT1EP04732 61 aa6.14□□□□□ -1.43
LYSMD4-210ENST00000545021 SPRR2DP22532 72 aa6.14□□□□□ -1.43
LYSMD4-210ENST00000545021 KRTAP2-2Q9BYT5 123 aa6.1□□□□□ -1.43
LYSMD4-210ENST00000545021 LOC100996750A0A140TA64 210 aa5.99□□□□□ -1.45
LYSMD4-210ENST00000545021 LCE3BQ5TA77 95 aa5.97□□□□□ -1.45
LYSMD4-210ENST00000545021 LCE5AQ5TCM9 118 aa5.96□□□□□ -1.46
LYSMD4-210ENST00000545021 KRTAP19-3Q7Z4W3 81 aa5.95□□□□□ -1.46
LYSMD4-210ENST00000545021 MT1GP13640 62 aa5.88□□□□□ -1.47
LYSMD4-210ENST00000545021 KRTAP4-3Q9BYR4 195 aa5.83□□□□□ -1.48
LYSMD4-210ENST00000545021 MT1AP04731 61 aa5.72□□□□□ -1.49
LYSMD4-210ENST00000545021 MT1MQ8N339 61 aa5.72□□□□□ -1.49
LYSMD4-210ENST00000545021 PRM1P04553 51 aa5.69□□□□□ -1.5
LYSMD4-210ENST00000545021 KRTAP4-9Q9BYQ8 210 aa5.64□□□□□ -1.51
LYSMD4-210ENST00000545021 KRTAP5-5Q701N2 237 aaPredicted RBP5.64□□□□□ -1.51
LYSMD4-210ENST00000545021 LCE3EQ5T5B0 92 aa5.59□□□□□ -1.51
LYSMD4-210ENST00000545021 LCE4AQ5TA78 99 aa5.58□□□□□ -1.52
LYSMD4-210ENST00000545021 LCE3DQ9BYE3 92 aa5.58□□□□□ -1.52
LYSMD4-210ENST00000545021 KRTAP5-4Q6L8H1 288 aa5.48□□□□□ -1.53
LYSMD4-210ENST00000545021 SYNE1Q8NF91 8797 aaKnown RBP5.41□□□□□ -1.54
LYSMD4-210ENST00000545021 LCE1DQ5T752 114 aa5.38□□□□□ -1.55
LYSMD4-210ENST00000545021 DSTQ03001 7570 aaKnown RBP5.37□□□□□ -1.55
LYSMD4-210ENST00000545021 KRTAP6-1Q3LI64 71 aa5.32□□□□□ -1.56
LYSMD4-210ENST00000545021 KRTAP6-2Q3LI66 62 aa5.27□□□□□ -1.57
LYSMD4-210ENST00000545021 GPR98Q8WXG9 6306 aa5.25□□□□□ -1.57
LYSMD4-210ENST00000545021 MT4P47944 62 aa5.24□□□□□ -1.57
LYSMD4-210ENST00000545021 HMCN1Q96RW7 5635 aa5.18□□□□□ -1.58
LYSMD4-210ENST00000545021 KRTAP4-6Q9BYQ5 205 aa5.14□□□□□ -1.59
LYSMD4-210ENST00000545021 AHNAK2Q8IVF2 5795 aa5.09□□□□□ -1.59
LYSMD4-210ENST00000545021 KRTAP20-2Q3LI61 65 aa5.08□□□□□ -1.6
LYSMD4-210ENST00000545021 KRTAP5-10Q6L8G5 202 aa5.03□□□□□ -1.6
LYSMD4-210ENST00000545021 KRTAP5-3Q6L8H2 238 aa4.97□□□□□ -1.61
LYSMD4-210ENST00000545021 LCE1EQ5T753 118 aa4.93□□□□□ -1.62
LYSMD4-210ENST00000545021 KRTAP5-7Q6L8G8 165 aa4.89□□□□□ -1.63
LYSMD4-210ENST00000545021 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
LYSMD4-210ENST00000545021 KRTAP5-2Q701N4 177 aa4.84□□□□□ -1.63
LYSMD4-210ENST00000545021 OBSCNQ5VST9 7968 aa4.66□□□□□ -1.66
LYSMD4-210ENST00000545021 MT3P25713 68 aa4.65□□□□□ -1.66
LYSMD4-210ENST00000545021 KRTAP4-11Q9BYQ6 195 aa4.59□□□□□ -1.67
LYSMD4-210ENST00000545021 KRTAP5-8O75690 187 aa4.46□□□□□ -1.69
LYSMD4-210ENST00000545021 AHNAKQ09666 5890 aaKnown RBP4.25□□□□□ -1.73
LYSMD4-210ENST00000545021 KRTAP5-1Q6L8H4 278 aa4.24□□□□□ -1.73
LYSMD4-210ENST00000545021 KRTAP9-9Q9BYP9 154 aa4.21□□□□□ -1.74
LYSMD4-210ENST00000545021 MUC5ACP98088 5654 aa4.13□□□□□ -1.75
LYSMD4-210ENST00000545021 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
LYSMD4-210ENST00000545021 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
LYSMD4-210ENST00000545021 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
LYSMD4-210ENST00000545021 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
LYSMD4-210ENST00000545021 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
LYSMD4-210ENST00000545021 KRTAP21-1Q3LI58 79 aa3.71□□□□□ -1.82
LYSMD4-210ENST00000545021 KRTAP4-12Q9BQ66 201 aa3.63□□□□□ -1.83
LYSMD4-210ENST00000545021 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
LYSMD4-210ENST00000545021 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
LYSMD4-210ENST00000545021 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
LYSMD4-210ENST00000545021 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
LYSMD4-210ENST00000545021 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
LYSMD4-210ENST00000545021 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
LYSMD4-210ENST00000545021 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 79 ms