RNA–Protein interactions for RNA: ENST00000544882.1

SCNN1A-222, Transcript of sodium channel epithelial 1 alpha subunit, human

TSL 3

Gene SCNN1A, Length 585 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCNN1A-222	ENST00000544882	MIR22HG	Q0VDD5	57 aa		5.77	□□□□□ -1.49
SCNN1A-222	ENST00000544882	PSPHP1	O15172	72 aa		5.75	□□□□□ -1.49
SCNN1A-222	ENST00000544882		Q1T7F1	81 aa		5.73	□□□□□ -1.49
SCNN1A-222	ENST00000544882	GPR98	Q8WXG9	6306 aa		5.7	□□□□□ -1.5
SCNN1A-222	ENST00000544882	KRTAP4-3	Q9BYR4	195 aa		5.7	□□□□□ -1.5
SCNN1A-222	ENST00000544882		V9GYY9	64 aa		5.68	□□□□□ -1.5
SCNN1A-222	ENST00000544882	LCE1D	Q5T752	114 aa		5.67	□□□□□ -1.5
SCNN1A-222	ENST00000544882	LCE4A	Q5TA78	99 aa		5.65	□□□□□ -1.5
SCNN1A-222	ENST00000544882	KRTAP12-3	P60328	96 aa		5.64	□□□□□ -1.51
SCNN1A-222	ENST00000544882	MT4	P47944	62 aa		5.61	□□□□□ -1.51
SCNN1A-222	ENST00000544882	KRTAP4-7	Q9BYR0	210 aa		5.6	□□□□□ -1.51
SCNN1A-222	ENST00000544882	KRTAP25-1	Q3LHN0	102 aa		5.59	□□□□□ -1.51
SCNN1A-222	ENST00000544882	SVIP	Q8NHG7	77 aa		5.59	□□□□□ -1.51
SCNN1A-222	ENST00000544882		K7ERS5	55 aa		5.55	□□□□□ -1.52
SCNN1A-222	ENST00000544882	HMCN1	Q96RW7	5635 aa		5.55	□□□□□ -1.52
SCNN1A-222	ENST00000544882	KRTAP5-4	Q6L8H1	288 aa		5.53	□□□□□ -1.52
SCNN1A-222	ENST00000544882		A6NED7	52 aa		5.51	□□□□□ -1.53
SCNN1A-222	ENST00000544882	PCP4	P48539	62 aa		5.5	□□□□□ -1.53
SCNN1A-222	ENST00000544882	RPS28	P62857	69 aa	Known RBP	5.48	□□□□□ -1.53
SCNN1A-222	ENST00000544882	KRTAP4-6	Q9BYQ5	205 aa		5.44	□□□□□ -1.54
SCNN1A-222	ENST00000544882	AHNAK2	Q8IVF2	5795 aa		5.41	□□□□□ -1.54
SCNN1A-222	ENST00000544882	KRTAP23-1	A1A580	65 aa		5.37	□□□□□ -1.55
SCNN1A-222	ENST00000544882	CDC42SE1	Q9NRR8	79 aa		5.32	□□□□□ -1.56
SCNN1A-222	ENST00000544882	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.31	□□□□□ -1.56
SCNN1A-222	ENST00000544882	LOC100996750	A0A140TA64	210 aa		5.3	□□□□□ -1.56
SCNN1A-222	ENST00000544882	KRTAP15-1	Q3LI76	137 aa		5.3	□□□□□ -1.56
SCNN1A-222	ENST00000544882	ROMO1	P60602	79 aa		5.28	□□□□□ -1.56
SCNN1A-222	ENST00000544882	KRTAP5-10	Q6L8G5	202 aa		5.28	□□□□□ -1.56
SCNN1A-222	ENST00000544882	KRTAP20-2	Q3LI61	65 aa		5.23	□□□□□ -1.57
SCNN1A-222	ENST00000544882	KRTAP19-4	Q3LI73	84 aa		5.22	□□□□□ -1.57
SCNN1A-222	ENST00000544882	LCE3C	Q5T5A8	94 aa		5.21	□□□□□ -1.58
SCNN1A-222	ENST00000544882	SPRR5	A0A1B0GTR4	108 aa		5.19	□□□□□ -1.58
SCNN1A-222	ENST00000544882	KRTAP12-4	P60329	112 aa		5.18	□□□□□ -1.58
SCNN1A-222	ENST00000544882	KRTAP5-3	Q6L8H2	238 aa		5.16	□□□□□ -1.58
SCNN1A-222	ENST00000544882	SYNE1	Q8NF91	8797 aa	Known RBP	5.11	□□□□□ -1.59
SCNN1A-222	ENST00000544882	KRTAP5-7	Q6L8G8	165 aa		5.09	□□□□□ -1.59
SCNN1A-222	ENST00000544882	KRTAP9-6	A8MVA2	160 aa		5.02	□□□□□ -1.61
SCNN1A-222	ENST00000544882	KRTAP6-1	Q3LI64	71 aa		4.94	□□□□□ -1.62
SCNN1A-222	ENST00000544882	MT1A	P04731	61 aa		4.93	□□□□□ -1.62
SCNN1A-222	ENST00000544882	KRTAP5-2	Q701N4	177 aa		4.83	□□□□□ -1.64
SCNN1A-222	ENST00000544882	BRK1	Q8WUW1	75 aa		4.81	□□□□□ -1.64
SCNN1A-222	ENST00000544882	KRTAP4-11	Q9BYQ6	195 aa		4.79	□□□□□ -1.64
SCNN1A-222	ENST00000544882	KRTAP9-4	Q9BYQ2	154 aa		4.76	□□□□□ -1.65
SCNN1A-222	ENST00000544882	KRTAP6-2	Q3LI66	62 aa		4.69	□□□□□ -1.66
SCNN1A-222	ENST00000544882	KRTAP5-8	O75690	187 aa		4.62	□□□□□ -1.67
SCNN1A-222	ENST00000544882	MT3	P25713	68 aa		4.51	□□□□□ -1.69
SCNN1A-222	ENST00000544882	PMAIP1	Q13794	54 aa		4.51	□□□□□ -1.69
SCNN1A-222	ENST00000544882	OBSCN	Q5VST9	7968 aa		4.5	□□□□□ -1.69
SCNN1A-222	ENST00000544882	AHNAK	Q09666	5890 aa	Known RBP	4.48	□□□□□ -1.69
SCNN1A-222	ENST00000544882	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.45	□□□□□ -1.7
SCNN1A-222	ENST00000544882	PRAC1	Q96KF2	57 aa		4.44	□□□□□ -1.7
SCNN1A-222	ENST00000544882	MUC5AC	P98088	5654 aa		4.41	□□□□□ -1.7
SCNN1A-222	ENST00000544882	KRTAP9-9	Q9BYP9	154 aa		4.4	□□□□□ -1.71
SCNN1A-222	ENST00000544882	KRTAP5-1	Q6L8H4	278 aa		4.35	□□□□□ -1.71
SCNN1A-222	ENST00000544882	PRO0628	Q9UI54	55 aa		4.31	□□□□□ -1.72
SCNN1A-222	ENST00000544882	LCE1E	Q5T753	118 aa		4.13	□□□□□ -1.75
SCNN1A-222	ENST00000544882	KTN1-AS1	Q86SY8	53 aa		4.03	□□□□□ -1.76
SCNN1A-222	ENST00000544882	KRTAP4-2	Q9BYR5	136 aa		3.93	□□□□□ -1.78
SCNN1A-222	ENST00000544882	LCE1B	Q5T7P3	118 aa		3.92	□□□□□ -1.78
SCNN1A-222	ENST00000544882		H3BS24	57 aa		3.88	□□□□□ -1.79
SCNN1A-222	ENST00000544882	LCE1C	Q5T751	118 aa		3.84	□□□□□ -1.79
SCNN1A-222	ENST00000544882	LCE3D	Q9BYE3	92 aa		3.75	□□□□□ -1.81
SCNN1A-222	ENST00000544882	KRTAP4-12	Q9BQ66	201 aa		3.59	□□□□□ -1.83
SCNN1A-222	ENST00000544882		A0A0A0MQY5	61 aa		3.58	□□□□□ -1.84
SCNN1A-222	ENST00000544882	LUZP6	Q538Z0	58 aa		3.57	□□□□□ -1.84
SCNN1A-222	ENST00000544882	LCE3E	Q5T5B0	92 aa		3.54	□□□□□ -1.84
SCNN1A-222	ENST00000544882	KRTAP5-11	Q6L8G4	156 aa		3.48	□□□□□ -1.85
SCNN1A-222	ENST00000544882	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.48	□□□□□ -1.85
SCNN1A-222	ENST00000544882	LCE1F	Q5T754	118 aa		3.4	□□□□□ -1.87
SCNN1A-222	ENST00000544882	KRTAP21-2	Q3LI59	83 aa		3.26	□□□□□ -1.89
SCNN1A-222	ENST00000544882	NDUFAF8	A1L188	74 aa		3.11	□□□□□ -1.91
SCNN1A-222	ENST00000544882	PHGR1	C9JFL3	82 aa		3.09	□□□□□ -1.91
SCNN1A-222	ENST00000544882	KRTAP4-4	Q9BYR3	166 aa		2.99	□□□□□ -1.93
SCNN1A-222	ENST00000544882	MUC19	Q7Z5P9	8384 aa		2.81	□□□□□ -1.96
SCNN1A-222	ENST00000544882	PRM1	P04553	51 aa		2.74	□□□□□ -1.97
SCNN1A-222	ENST00000544882	INE1	O15225	51 aa		2.69	□□□□□ -1.98
SCNN1A-222	ENST00000544882	KRTAP21-1	Q3LI58	79 aa		2.34	□□□□□ -2.03
SCNN1A-222	ENST00000544882	MUC16	Q8WXI7	14507 aa		2.03	□□□□□ -2.08

Retrieved 78 of 20,778 RNA–protein pairs in 43.9 ms