RNA–Protein interactions for RNA: ENST00000544643.5

CCDC189-209, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-209ENST00000544643 MT1LQ93083 61 aa7.1□□□□□ -1.27
CCDC189-209ENST00000544643 MACF1Q9UPN3 7388 aaKnown RBP7.04□□□□□ -1.28
CCDC189-209ENST00000544643 A0A0A0MQY5 61 aa7□□□□□ -1.29
CCDC189-209ENST00000544643 SYNE2Q8WXH0 6885 aaKnown RBP6.93□□□□□ -1.3
CCDC189-209ENST00000544643 KRTAP4-7Q9BYR0 210 aa6.91□□□□□ -1.3
CCDC189-209ENST00000544643 KRTAP19-3Q7Z4W3 81 aa6.85□□□□□ -1.31
CCDC189-209ENST00000544643 MT1GP13640 62 aa6.83□□□□□ -1.32
CCDC189-209ENST00000544643 KRTAP9-6A8MVA2 160 aa6.82□□□□□ -1.32
CCDC189-209ENST00000544643 KRTAP6-3Q3LI67 103 aa6.82□□□□□ -1.32
CCDC189-209ENST00000544643 SPRR2FQ96RM1 72 aa6.82□□□□□ -1.32
CCDC189-209ENST00000544643 MT1MQ8N339 61 aa6.75□□□□□ -1.33
CCDC189-209ENST00000544643 LCE5AQ5TCM9 118 aa6.7□□□□□ -1.34
CCDC189-209ENST00000544643 KRTAP5-9P26371 169 aa6.66□□□□□ -1.34
CCDC189-209ENST00000544643 MUC12Q9UKN1 5478 aa6.65□□□□□ -1.35
CCDC189-209ENST00000544643 KRTAP4-3Q9BYR4 195 aa6.64□□□□□ -1.35
CCDC189-209ENST00000544643 NEBP20929 6669 aa6.5□□□□□ -1.37
CCDC189-209ENST00000544643 LCE1AQ5T7P2 110 aa6.49□□□□□ -1.37
CCDC189-209ENST00000544643 LOC100996750A0A140TA64 210 aa6.47□□□□□ -1.37
CCDC189-209ENST00000544643 KRTAP2-3P0C7H8 128 aa6.46□□□□□ -1.38
CCDC189-209ENST00000544643 KRTAP2-4Q9BYR9 128 aa6.46□□□□□ -1.38
CCDC189-209ENST00000544643 KRTAP2-1Q9BYU5 128 aa6.46□□□□□ -1.38
CCDC189-209ENST00000544643 SPRR2EP22531 72 aa6.39□□□□□ -1.39
CCDC189-209ENST00000544643 SPRR2BP35325 72 aa6.39□□□□□ -1.39
CCDC189-209ENST00000544643 SPRR2AP35326 72 aa6.39□□□□□ -1.39
CCDC189-209ENST00000544643 MDN1Q9NU22 5596 aa6.35□□□□□ -1.39
CCDC189-209ENST00000544643 KRTAP20-1Q3LI63 56 aa6.26□□□□□ -1.41
CCDC189-209ENST00000544643 INE1O15225 51 aa6.21□□□□□ -1.42
CCDC189-209ENST00000544643 DSTQ03001 7570 aaKnown RBP6.18□□□□□ -1.42
CCDC189-209ENST00000544643 SPRR2DP22532 72 aa6.14□□□□□ -1.43
CCDC189-209ENST00000544643 KRTAP5-5Q701N2 237 aaPredicted RBP6.06□□□□□ -1.44
CCDC189-209ENST00000544643 MT1AP04731 61 aa6.03□□□□□ -1.44
CCDC189-209ENST00000544643 KRTAP6-1Q3LI64 71 aa5.98□□□□□ -1.45
CCDC189-209ENST00000544643 KRTAP2-2Q9BYT5 123 aa5.95□□□□□ -1.46
CCDC189-209ENST00000544643 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
CCDC189-209ENST00000544643 KRTAP9-4Q9BYQ2 154 aa5.72□□□□□ -1.49
CCDC189-209ENST00000544643 SYNE1Q8NF91 8797 aaKnown RBP5.65□□□□□ -1.5
CCDC189-209ENST00000544643 KRTAP5-4Q6L8H1 288 aa5.65□□□□□ -1.51
CCDC189-209ENST00000544643 KRTAP4-9Q9BYQ8 210 aa5.59□□□□□ -1.51
CCDC189-209ENST00000544643 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
CCDC189-209ENST00000544643 LCE4AQ5TA78 99 aa5.47□□□□□ -1.53
CCDC189-209ENST00000544643 MT3P25713 68 aa5.45□□□□□ -1.54
CCDC189-209ENST00000544643 KRTAP6-2Q3LI66 62 aa5.45□□□□□ -1.54
CCDC189-209ENST00000544643 LCE3DQ9BYE3 92 aa5.45□□□□□ -1.54
CCDC189-209ENST00000544643 LCE3EQ5T5B0 92 aa5.34□□□□□ -1.55
CCDC189-209ENST00000544643 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
CCDC189-209ENST00000544643 KRTAP4-6Q9BYQ5 205 aa5.32□□□□□ -1.56
CCDC189-209ENST00000544643 MT4P47944 62 aa5.32□□□□□ -1.56
CCDC189-209ENST00000544643 KRTAP20-2Q3LI61 65 aa5.26□□□□□ -1.57
CCDC189-209ENST00000544643 HMCN1Q96RW7 5635 aa5.22□□□□□ -1.57
CCDC189-209ENST00000544643 KRTAP5-2Q701N4 177 aa5.18□□□□□ -1.58
CCDC189-209ENST00000544643 GPR98Q8WXG9 6306 aa5.13□□□□□ -1.59
CCDC189-209ENST00000544643 KRTAP5-3Q6L8H2 238 aa5.06□□□□□ -1.6
CCDC189-209ENST00000544643 AHNAK2Q8IVF2 5795 aa4.97□□□□□ -1.61
CCDC189-209ENST00000544643 OBSCNQ5VST9 7968 aa4.92□□□□□ -1.62
CCDC189-209ENST00000544643 KRTAP5-10Q6L8G5 202 aa4.88□□□□□ -1.63
CCDC189-209ENST00000544643 PRM1P04553 51 aa4.8□□□□□ -1.64
CCDC189-209ENST00000544643 KRTAP5-7Q6L8G8 165 aa4.68□□□□□ -1.66
CCDC189-209ENST00000544643 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
CCDC189-209ENST00000544643 KRTAP4-11Q9BYQ6 195 aa4.53□□□□□ -1.69
CCDC189-209ENST00000544643 KRTAP5-1Q6L8H4 278 aa4.42□□□□□ -1.7
CCDC189-209ENST00000544643 LCE1BQ5T7P3 118 aa4.37□□□□□ -1.71
CCDC189-209ENST00000544643 KRTAP5-8O75690 187 aa4.36□□□□□ -1.71
CCDC189-209ENST00000544643 LCE1CQ5T751 118 aa4.35□□□□□ -1.71
CCDC189-209ENST00000544643 MUC5ACP98088 5654 aa4.34□□□□□ -1.72
CCDC189-209ENST00000544643 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
CCDC189-209ENST00000544643 KRTAP9-9Q9BYP9 154 aa4.13□□□□□ -1.75
CCDC189-209ENST00000544643 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
CCDC189-209ENST00000544643 MUC5BQ9HC84 5762 aaPredicted RBP4.08□□□□□ -1.76
CCDC189-209ENST00000544643 AHNAKQ09666 5890 aaKnown RBP4.06□□□□□ -1.76
CCDC189-209ENST00000544643 KRTAP21-2Q3LI59 83 aa3.91□□□□□ -1.78
CCDC189-209ENST00000544643 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
CCDC189-209ENST00000544643 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
CCDC189-209ENST00000544643 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
CCDC189-209ENST00000544643 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
CCDC189-209ENST00000544643 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
CCDC189-209ENST00000544643 KRTAP21-1Q3LI58 79 aa3□□□□□ -1.93
CCDC189-209ENST00000544643 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
CCDC189-209ENST00000544643 MUC16Q8WXI7 14507 aa2.17□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 36.1 ms