RNA–Protein interactions for RNA: ENST00000544497.1

DDX47-211, Transcript of DEAD-box helicase 47, humanhuman

TSL 2

Gene DDX47, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-211ENST00000544497 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
DDX47-211ENST00000544497 KRTAP4-1Q9BYQ7 146 aa2.81□□□□□ -1.96
DDX47-211ENST00000544497 PRO2289Q9P1D8 64 aa2.79□□□□□ -1.96
DDX47-211ENST00000544497 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
DDX47-211ENST00000544497 MT1HP80294 61 aa2.77□□□□□ -1.97
DDX47-211ENST00000544497 KRTAP19-2Q3LHN2 52 aa2.75□□□□□ -1.97
DDX47-211ENST00000544497 COX6B2Q6YFQ2 88 aa2.73□□□□□ -1.97
DDX47-211ENST00000544497 MACF1Q9UPN3 7388 aaKnown RBP2.72□□□□□ -1.97
DDX47-211ENST00000544497 M0R2T5 61 aa2.71□□□□□ -1.98
DDX47-211ENST00000544497 RPL37P61927 97 aaKnown RBP2.7□□□□□ -1.98
DDX47-211ENST00000544497 SYNE2Q8WXH0 6885 aaKnown RBP2.7□□□□□ -1.98
DDX47-211ENST00000544497 USH2AO75445 5202 aa2.7□□□□□ -1.98
DDX47-211ENST00000544497 SSPOA2VEC9 5147 aa2.69□□□□□ -1.98
DDX47-211ENST00000544497 C9orf92A6NGG3 77 aa2.68□□□□□ -1.98
DDX47-211ENST00000544497 H0YAA0 97 aa2.67□□□□□ -1.98
DDX47-211ENST00000544497 FCGBPQ9Y6R7 5405 aaPredicted RBP2.67□□□□□ -1.98
DDX47-211ENST00000544497 H1FX-AS1Q4G0G2 97 aa2.66□□□□□ -1.98
DDX47-211ENST00000544497 FLGP20930 4061 aaPredicted RBP2.63□□□□□ -1.99
DDX47-211ENST00000544497 M0QZ58 72 aa2.61□□□□□ -1.99
DDX47-211ENST00000544497 S4R3F8 94 aa2.61□□□□□ -1.99
DDX47-211ENST00000544497 KRTAP6-3Q3LI67 103 aa2.58□□□□□ -2
DDX47-211ENST00000544497 KRTAP20-1Q3LI63 56 aa2.56□□□□□ -2
DDX47-211ENST00000544497 CRIPTQ9P021 101 aa2.55□□□□□ -2
DDX47-211ENST00000544497 NEBP20929 6669 aa2.53□□□□□ -2
DDX47-211ENST00000544497 KRTAP12-3P60328 96 aa2.52□□□□□ -2.01
DDX47-211ENST00000544497 INE1O15225 51 aa2.51□□□□□ -2.01
DDX47-211ENST00000544497 KRTAP19-6Q3LI70 58 aa2.51□□□□□ -2.01
DDX47-211ENST00000544497 MT2AP02795 61 aa2.5□□□□□ -2.01
DDX47-211ENST00000544497 MT1FP04733 61 aa2.49□□□□□ -2.01
DDX47-211ENST00000544497 MUC12Q9UKN1 5478 aa2.47□□□□□ -2.01
DDX47-211ENST00000544497 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
DDX47-211ENST00000544497 KRTAP12-1P59990 96 aa2.44□□□□□ -2.02
DDX47-211ENST00000544497 C10orf95Q9H7T3 257 aa2.42□□□□□ -2.02
DDX47-211ENST00000544497 A0A0D9SG42 100 aa2.41□□□□□ -2.02
DDX47-211ENST00000544497 KRTAP13-4Q3LI77 160 aa2.39□□□□□ -2.03
DDX47-211ENST00000544497 KRTAP2-3P0C7H8 128 aa2.38□□□□□ -2.03
DDX47-211ENST00000544497 KRTAP2-4Q9BYR9 128 aa2.38□□□□□ -2.03
DDX47-211ENST00000544497 PLAC4Q8WY50 150 aa2.37□□□□□ -2.03
DDX47-211ENST00000544497 KMT2DO14686 5537 aa2.34□□□□□ -2.03
DDX47-211ENST00000544497 KRTAP12-4P60329 112 aa2.34□□□□□ -2.03
DDX47-211ENST00000544497 MDN1Q9NU22 5596 aa2.3□□□□□ -2.04
DDX47-211ENST00000544497 TNP1P09430 55 aa2.29□□□□□ -2.04
DDX47-211ENST00000544497 KRTAP2-1Q9BYU5 128 aa2.29□□□□□ -2.04
DDX47-211ENST00000544497 SPRR2GQ9BYE4 73 aa2.26□□□□□ -2.05
DDX47-211ENST00000544497 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
DDX47-211ENST00000544497 SPRR2EP22531 72 aa2.25□□□□□ -2.05
DDX47-211ENST00000544497 SPRR2BP35325 72 aa2.25□□□□□ -2.05
DDX47-211ENST00000544497 SPRR2AP35326 72 aa2.25□□□□□ -2.05
DDX47-211ENST00000544497 SPRR2FQ96RM1 72 aa2.21□□□□□ -2.06
DDX47-211ENST00000544497 MT1BP07438 61 aa2.19□□□□□ -2.06
DDX47-211ENST00000544497 SPRR2DP22532 72 aa2.18□□□□□ -2.06
DDX47-211ENST00000544497 KRTAP19-8Q3LI54 63 aa2.16□□□□□ -2.06
DDX47-211ENST00000544497 DSTQ03001 7570 aaKnown RBP2.13□□□□□ -2.07
DDX47-211ENST00000544497 KRTAP8-1Q8IUC2 63 aa2.09□□□□□ -2.07
DDX47-211ENST00000544497 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
DDX47-211ENST00000544497 MT1XP80297 61 aa1.98□□□□□ -2.09
DDX47-211ENST00000544497 AHNAK2Q8IVF2 5795 aa1.95□□□□□ -2.1
DDX47-211ENST00000544497 MT4P47944 62 aa1.95□□□□□ -2.1
DDX47-211ENST00000544497 HMCN1Q96RW7 5635 aa1.9□□□□□ -2.1
DDX47-211ENST00000544497 KRTAP19-5Q3LI72 72 aa1.82□□□□□ -2.12
DDX47-211ENST00000544497 KRTAP19-3Q7Z4W3 81 aa1.82□□□□□ -2.12
DDX47-211ENST00000544497 MT1GP13640 62 aa1.79□□□□□ -2.12
DDX47-211ENST00000544497 MT1EP04732 61 aa1.78□□□□□ -2.12
DDX47-211ENST00000544497 MT1LQ93083 61 aa1.78□□□□□ -2.12
DDX47-211ENST00000544497 KRTAP19-7Q3SYF9 63 aa1.77□□□□□ -2.13
DDX47-211ENST00000544497 KRTAP20-2Q3LI61 65 aa1.73□□□□□ -2.13
DDX47-211ENST00000544497 MT1MQ8N339 61 aa1.7□□□□□ -2.14
DDX47-211ENST00000544497 MUC5ACP98088 5654 aa1.68□□□□□ -2.14
DDX47-211ENST00000544497 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
DDX47-211ENST00000544497 SYNE1Q8NF91 8797 aaKnown RBP1.61□□□□□ -2.15
DDX47-211ENST00000544497 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
DDX47-211ENST00000544497 MT1AP04731 61 aa1.58□□□□□ -2.16
DDX47-211ENST00000544497 KRTAP6-1Q3LI64 71 aa1.41□□□□□ -2.18
DDX47-211ENST00000544497 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.19
DDX47-211ENST00000544497 PRM1P04553 51 aa1.38□□□□□ -2.19
DDX47-211ENST00000544497 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
DDX47-211ENST00000544497 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
DDX47-211ENST00000544497 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 41 ms