RNA–Protein interactions for RNA: ENST00000544496.5

PCMT1-211, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 2 BASIC

Gene PCMT1, Length 1,628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-211ENST00000544496 SYNE2Q8WXH0 6885 aaKnown RBP8.2□□□□□ -1.1
PCMT1-211ENST00000544496 KRTAP6-3Q3LI67 103 aa8.19□□□□□ -1.1
PCMT1-211ENST00000544496 MT1GP13640 62 aa8.17□□□□□ -1.1
PCMT1-211ENST00000544496 LCE5AQ5TCM9 118 aa8.05□□□□□ -1.12
PCMT1-211ENST00000544496 LUZP6Q538Z0 58 aa8.03□□□□□ -1.12
PCMT1-211ENST00000544496 MUC12Q9UKN1 5478 aa8.02□□□□□ -1.13
PCMT1-211ENST00000544496 MT1MQ8N339 61 aa8□□□□□ -1.13
PCMT1-211ENST00000544496 LCE1AQ5T7P2 110 aa8□□□□□ -1.13
PCMT1-211ENST00000544496 KRTAP4-7Q9BYR0 210 aa7.97□□□□□ -1.13
PCMT1-211ENST00000544496 SPRR2EP22531 72 aa7.96□□□□□ -1.14
PCMT1-211ENST00000544496 SPRR2BP35325 72 aa7.96□□□□□ -1.14
PCMT1-211ENST00000544496 SPRR2AP35326 72 aa7.96□□□□□ -1.14
PCMT1-211ENST00000544496 KRTAP9-7A8MTY7 169 aa7.89□□□□□ -1.15
PCMT1-211ENST00000544496 KRTAP4-3Q9BYR4 195 aa7.76□□□□□ -1.17
PCMT1-211ENST00000544496 MDN1Q9NU22 5596 aa7.73□□□□□ -1.17
PCMT1-211ENST00000544496 NDUFAF8A1L188 74 aa7.7□□□□□ -1.18
PCMT1-211ENST00000544496 KRTAP9-6A8MVA2 160 aa7.69□□□□□ -1.18
PCMT1-211ENST00000544496 SPRR2DP22532 72 aa7.67□□□□□ -1.18
PCMT1-211ENST00000544496 NEBP20929 6669 aa7.5□□□□□ -1.21
PCMT1-211ENST00000544496 LOC100996750A0A140TA64 210 aa7.49□□□□□ -1.21
PCMT1-211ENST00000544496 DSTQ03001 7570 aaKnown RBP7.41□□□□□ -1.22
PCMT1-211ENST00000544496 LCE3BQ5TA77 95 aa7.37□□□□□ -1.23
PCMT1-211ENST00000544496 KRTAP5-5Q701N2 237 aaPredicted RBP7.21□□□□□ -1.26
PCMT1-211ENST00000544496 KRTAP2-3P0C7H8 128 aa7.18□□□□□ -1.26
PCMT1-211ENST00000544496 KRTAP2-4Q9BYR9 128 aa7.18□□□□□ -1.26
PCMT1-211ENST00000544496 KRTAP2-1Q9BYU5 128 aa7.16□□□□□ -1.26
PCMT1-211ENST00000544496 MT1AP04731 61 aa7.11□□□□□ -1.27
PCMT1-211ENST00000544496 KRTAP20-1Q3LI63 56 aa7.03□□□□□ -1.28
PCMT1-211ENST00000544496 KRTAP2-2Q9BYT5 123 aa7.03□□□□□ -1.28
PCMT1-211ENST00000544496 KRTAP6-1Q3LI64 71 aa6.98□□□□□ -1.29
PCMT1-211ENST00000544496 KRTAP5-4Q6L8H1 288 aa6.93□□□□□ -1.3
PCMT1-211ENST00000544496 A0A0A0MQY5 61 aa6.87□□□□□ -1.31
PCMT1-211ENST00000544496 LCE4AQ5TA78 99 aa6.87□□□□□ -1.31
PCMT1-211ENST00000544496 KRTAP12-4P60329 112 aa6.79□□□□□ -1.32
PCMT1-211ENST00000544496 KRTAP9-4Q9BYQ2 154 aa6.76□□□□□ -1.33
PCMT1-211ENST00000544496 SYNE1Q8NF91 8797 aaKnown RBP6.7□□□□□ -1.34
PCMT1-211ENST00000544496 H3BS24 57 aa6.64□□□□□ -1.35
PCMT1-211ENST00000544496 MT4P47944 62 aa6.61□□□□□ -1.35
PCMT1-211ENST00000544496 KRTAP4-6Q9BYQ5 205 aa6.54□□□□□ -1.36
PCMT1-211ENST00000544496 KRTAP4-9Q9BYQ8 210 aa6.52□□□□□ -1.37
PCMT1-211ENST00000544496 LCE1DQ5T752 114 aa6.51□□□□□ -1.37
PCMT1-211ENST00000544496 MT3P25713 68 aa6.47□□□□□ -1.37
PCMT1-211ENST00000544496 KRTAP20-2Q3LI61 65 aa6.47□□□□□ -1.37
PCMT1-211ENST00000544496 INE1O15225 51 aa6.46□□□□□ -1.38
PCMT1-211ENST00000544496 KRTAP6-2Q3LI66 62 aa6.45□□□□□ -1.38
PCMT1-211ENST00000544496 HMCN1Q96RW7 5635 aa6.29□□□□□ -1.4
PCMT1-211ENST00000544496 KRTAP5-2Q701N4 177 aa6.27□□□□□ -1.41
PCMT1-211ENST00000544496 KRTAP5-3Q6L8H2 238 aa6.22□□□□□ -1.41
PCMT1-211ENST00000544496 LCE3DQ9BYE3 92 aa6.21□□□□□ -1.42
PCMT1-211ENST00000544496 LCE3EQ5T5B0 92 aa6.03□□□□□ -1.44
PCMT1-211ENST00000544496 GPR98Q8WXG9 6306 aa5.94□□□□□ -1.46
PCMT1-211ENST00000544496 OBSCNQ5VST9 7968 aa5.81□□□□□ -1.48
PCMT1-211ENST00000544496 LCE1EQ5T753 118 aa5.66□□□□□ -1.5
PCMT1-211ENST00000544496 KRTAP4-11Q9BYQ6 195 aa5.63□□□□□ -1.51
PCMT1-211ENST00000544496 AHNAK2Q8IVF2 5795 aa5.53□□□□□ -1.52
PCMT1-211ENST00000544496 KRTAP5-10Q6L8G5 202 aa5.42□□□□□ -1.54
PCMT1-211ENST00000544496 KRTAP5-1Q6L8H4 278 aa5.41□□□□□ -1.54
PCMT1-211ENST00000544496 KRTAP5-8O75690 187 aa5.39□□□□□ -1.55
PCMT1-211ENST00000544496 KRTAP5-7Q6L8G8 165 aa5.26□□□□□ -1.57
PCMT1-211ENST00000544496 LCE1CQ5T751 118 aa5.25□□□□□ -1.57
PCMT1-211ENST00000544496 LCE1BQ5T7P3 118 aa5.25□□□□□ -1.57
PCMT1-211ENST00000544496 PRM1P04553 51 aa5.19□□□□□ -1.58
PCMT1-211ENST00000544496 KRTAP4-12Q9BQ66 201 aa5.19□□□□□ -1.58
PCMT1-211ENST00000544496 KRTAP4-2Q9BYR5 136 aa5.18□□□□□ -1.58
PCMT1-211ENST00000544496 MUC5ACP98088 5654 aa5.05□□□□□ -1.6
PCMT1-211ENST00000544496 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
PCMT1-211ENST00000544496 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.9□□□□□ -1.62
PCMT1-211ENST00000544496 KRTAP5-11Q6L8G4 156 aa4.62□□□□□ -1.67
PCMT1-211ENST00000544496 KRTAP21-2Q3LI59 83 aa4.58□□□□□ -1.68
PCMT1-211ENST00000544496 AHNAKQ09666 5890 aaKnown RBP4.55□□□□□ -1.68
PCMT1-211ENST00000544496 MUC5BQ9HC84 5762 aaPredicted RBP4.54□□□□□ -1.68
PCMT1-211ENST00000544496 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
PCMT1-211ENST00000544496 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
PCMT1-211ENST00000544496 PHGR1C9JFL3 82 aa3.96□□□□□ -1.78
PCMT1-211ENST00000544496 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.87
PCMT1-211ENST00000544496 KRTAP21-1Q3LI58 79 aa3.19□□□□□ -1.9
PCMT1-211ENST00000544496 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms