RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 ANAPC13Q9BS18 74 aa9.44□□□□□ -0.9
PDCD2-211ENST00000544336 TNP1P09430 55 aa9.43□□□□□ -0.9
PDCD2-211ENST00000544336 A0A1B0GU69 56 aa9.41□□□□□ -0.9
PDCD2-211ENST00000544336 H7BZZ5 65 aa9.36□□□□□ -0.91
PDCD2-211ENST00000544336 KRTAP4-7Q9BYR0 210 aa9.31□□□□□ -0.92
PDCD2-211ENST00000544336 CCDC179H3BU77 68 aa9.24□□□□□ -0.93
PDCD2-211ENST00000544336 KRTAP12-3P60328 96 aa9.16□□□□□ -0.94
PDCD2-211ENST00000544336 KRTAP5-3Q6L8H2 238 aa9.16□□□□□ -0.94
PDCD2-211ENST00000544336 KRTAP5-7Q6L8G8 165 aa9.13□□□□□ -0.95
PDCD2-211ENST00000544336 KRTAP20-2Q3LI61 65 aa9.08□□□□□ -0.96
PDCD2-211ENST00000544336 KRTAP5-5Q701N2 237 aaPredicted RBP9□□□□□ -0.97
PDCD2-211ENST00000544336 ATP5EP56381 51 aaPredicted RBP8.99□□□□□ -0.97
PDCD2-211ENST00000544336 PRR15LQ9BU68 103 aa8.98□□□□□ -0.97
PDCD2-211ENST00000544336 SPRR5A0A1B0GTR4 108 aa8.94□□□□□ -0.98
PDCD2-211ENST00000544336 TMEM258P61165 79 aa8.93□□□□□ -0.98
PDCD2-211ENST00000544336 KRTAP12-4P60329 112 aa8.89□□□□□ -0.99
PDCD2-211ENST00000544336 LOC100996750A0A140TA64 210 aa8.84□□□□□ -0.99
PDCD2-211ENST00000544336 LINC01558Q9Y6Z2 57 aa8.77□□□□□ -1.01
PDCD2-211ENST00000544336 PCP4P48539 62 aa8.75□□□□□ -1.01
PDCD2-211ENST00000544336 SYNE1Q8NF91 8797 aaKnown RBP8.66□□□□□ -1.02
PDCD2-211ENST00000544336 UQCR11O14957 56 aa8.66□□□□□ -1.02
PDCD2-211ENST00000544336 KRTAP25-1Q3LHN0 102 aa8.66□□□□□ -1.02
PDCD2-211ENST00000544336 KRTAP19-4Q3LI73 84 aa8.49□□□□□ -1.05
PDCD2-211ENST00000544336 MIR22HGQ0VDD5 57 aa8.45□□□□□ -1.06
PDCD2-211ENST00000544336 KRTAP15-1Q3LI76 137 aa8.41□□□□□ -1.06
PDCD2-211ENST00000544336 LCE3CQ5T5A8 94 aa8.39□□□□□ -1.07
PDCD2-211ENST00000544336 KRTAP4-11Q9BYQ6 195 aa8.38□□□□□ -1.07
PDCD2-211ENST00000544336 K7ERS5 55 aa8.36□□□□□ -1.07
PDCD2-211ENST00000544336 RPS28P62857 69 aaKnown RBP8.33□□□□□ -1.08
PDCD2-211ENST00000544336 V9GYY9 64 aa8.33□□□□□ -1.08
PDCD2-211ENST00000544336 Q1T7F1 81 aa8.31□□□□□ -1.08
PDCD2-211ENST00000544336 KRTAP5-2Q701N4 177 aa8.29□□□□□ -1.08
PDCD2-211ENST00000544336 KRTAP6-1Q3LI64 71 aa8.28□□□□□ -1.08
PDCD2-211ENST00000544336 MT1AP04731 61 aa8.27□□□□□ -1.09
PDCD2-211ENST00000544336 KRTAP23-1A1A580 65 aa8.25□□□□□ -1.09
PDCD2-211ENST00000544336 PSPHP1O15172 72 aa8.2□□□□□ -1.1
PDCD2-211ENST00000544336 KRTAP5-8O75690 187 aa8.11□□□□□ -1.11
PDCD2-211ENST00000544336 KRTAP9-4Q9BYQ2 154 aa8.04□□□□□ -1.12
PDCD2-211ENST00000544336 KRTAP6-2Q3LI66 62 aa8□□□□□ -1.13
PDCD2-211ENST00000544336 A6NED7 52 aa7.96□□□□□ -1.14
PDCD2-211ENST00000544336 KRTAP9-6A8MVA2 160 aa7.95□□□□□ -1.14
PDCD2-211ENST00000544336 MUC5ACP98088 5654 aa7.92□□□□□ -1.14
PDCD2-211ENST00000544336 AHNAKQ09666 5890 aaKnown RBP7.9□□□□□ -1.15
PDCD2-211ENST00000544336 MUC5BQ9HC84 5762 aaPredicted RBP7.87□□□□□ -1.15
PDCD2-211ENST00000544336 CDC42SE1Q9NRR8 79 aa7.87□□□□□ -1.15
PDCD2-211ENST00000544336 OBSCNQ5VST9 7968 aa7.8□□□□□ -1.16
PDCD2-211ENST00000544336 KRTAP9-9Q9BYP9 154 aa7.78□□□□□ -1.16
PDCD2-211ENST00000544336 ROMO1P60602 79 aa7.71□□□□□ -1.18
PDCD2-211ENST00000544336 MT3P25713 68 aa7.58□□□□□ -1.2
PDCD2-211ENST00000544336 KRTAP5-1Q6L8H4 278 aa7.53□□□□□ -1.2
PDCD2-211ENST00000544336 BRK1Q8WUW1 75 aa7.4□□□□□ -1.22
PDCD2-211ENST00000544336 LCE1EQ5T753 118 aa7.01□□□□□ -1.29
PDCD2-211ENST00000544336 PMAIP1Q13794 54 aa6.98□□□□□ -1.29
PDCD2-211ENST00000544336 PRO0628Q9UI54 55 aa6.91□□□□□ -1.3
PDCD2-211ENST00000544336 H3BS24 57 aa6.82□□□□□ -1.32
PDCD2-211ENST00000544336 SVIPQ8NHG7 77 aa6.82□□□□□ -1.32
PDCD2-211ENST00000544336 LCE1BQ5T7P3 118 aa6.75□□□□□ -1.33
PDCD2-211ENST00000544336 KRTAP4-2Q9BYR5 136 aa6.72□□□□□ -1.33
PDCD2-211ENST00000544336 PRAC1Q96KF2 57 aa6.62□□□□□ -1.35
PDCD2-211ENST00000544336 LCE1CQ5T751 118 aa6.52□□□□□ -1.37
PDCD2-211ENST00000544336 KTN1-AS1Q86SY8 53 aa6.5□□□□□ -1.37
PDCD2-211ENST00000544336 KRTAP4-12Q9BQ66 201 aa6.38□□□□□ -1.39
PDCD2-211ENST00000544336 LCE3DQ9BYE3 92 aa5.96□□□□□ -1.46
PDCD2-211ENST00000544336 KRTAP5-11Q6L8G4 156 aa5.95□□□□□ -1.46
PDCD2-211ENST00000544336 LCE1FQ5T754 118 aa5.86□□□□□ -1.47
PDCD2-211ENST00000544336 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.86□□□□□ -1.47
PDCD2-211ENST00000544336 PHGR1C9JFL3 82 aa5.56□□□□□ -1.52
PDCD2-211ENST00000544336 LCE3EQ5T5B0 92 aa5.53□□□□□ -1.52
PDCD2-211ENST00000544336 LUZP6Q538Z0 58 aa5.49□□□□□ -1.53
PDCD2-211ENST00000544336 KRTAP21-2Q3LI59 83 aa5.43□□□□□ -1.54
PDCD2-211ENST00000544336 KRTAP4-4Q9BYR3 166 aa5.13□□□□□ -1.59
PDCD2-211ENST00000544336 NDUFAF8A1L188 74 aa4.91□□□□□ -1.62
PDCD2-211ENST00000544336 MUC19Q7Z5P9 8384 aa4.84□□□□□ -1.63
PDCD2-211ENST00000544336 A0A0A0MQY5 61 aa4.55□□□□□ -1.68
PDCD2-211ENST00000544336 KRTAP21-1Q3LI58 79 aa4.19□□□□□ -1.74
PDCD2-211ENST00000544336 INE1O15225 51 aa4.04□□□□□ -1.76
PDCD2-211ENST00000544336 PRM1P04553 51 aa3.95□□□□□ -1.78
PDCD2-211ENST00000544336 MUC16Q8WXI7 14507 aa3.4□□□□□ -1.86
Retrieved 78 of 20,778 RNA–protein pairs in 68.3 ms