RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 SYNE2Q8WXH0 6885 aaKnown RBP6.89□□□□□ -1.31
COPS7A-218ENST00000543939 MUC12Q9UKN1 5478 aa6.87□□□□□ -1.31
COPS7A-218ENST00000543939 KRTAP19-3Q7Z4W3 81 aa6.87□□□□□ -1.31
COPS7A-218ENST00000543939 NDUFAF8A1L188 74 aa6.86□□□□□ -1.31
COPS7A-218ENST00000543939 KRTAP4-7Q9BYR0 210 aa6.86□□□□□ -1.31
COPS7A-218ENST00000543939 KRTAP5-9P26371 169 aa6.84□□□□□ -1.31
COPS7A-218ENST00000543939 MT1GP13640 62 aa6.81□□□□□ -1.32
COPS7A-218ENST00000543939 MT1MQ8N339 61 aa6.75□□□□□ -1.33
COPS7A-218ENST00000543939 LCE5AQ5TCM9 118 aa6.74□□□□□ -1.33
COPS7A-218ENST00000543939 KRTAP9-6A8MVA2 160 aa6.67□□□□□ -1.34
COPS7A-218ENST00000543939 KRTAP9-7A8MTY7 169 aa6.66□□□□□ -1.34
COPS7A-218ENST00000543939 KRTAP6-3Q3LI67 103 aa6.66□□□□□ -1.34
COPS7A-218ENST00000543939 KRTAP4-3Q9BYR4 195 aa6.64□□□□□ -1.35
COPS7A-218ENST00000543939 LCE1AQ5T7P2 110 aa6.64□□□□□ -1.35
COPS7A-218ENST00000543939 MDN1Q9NU22 5596 aa6.56□□□□□ -1.36
COPS7A-218ENST00000543939 SPRR2EP22531 72 aa6.56□□□□□ -1.36
COPS7A-218ENST00000543939 SPRR2BP35325 72 aa6.56□□□□□ -1.36
COPS7A-218ENST00000543939 SPRR2AP35326 72 aa6.56□□□□□ -1.36
COPS7A-218ENST00000543939 LOC100996750A0A140TA64 210 aa6.43□□□□□ -1.38
COPS7A-218ENST00000543939 H3BS24 57 aa6.33□□□□□ -1.4
COPS7A-218ENST00000543939 NEBP20929 6669 aa6.32□□□□□ -1.4
COPS7A-218ENST00000543939 SPRR2DP22532 72 aa6.3□□□□□ -1.4
COPS7A-218ENST00000543939 DSTQ03001 7570 aaKnown RBP6.28□□□□□ -1.4
COPS7A-218ENST00000543939 KRTAP2-3P0C7H8 128 aa6.2□□□□□ -1.42
COPS7A-218ENST00000543939 KRTAP2-4Q9BYR9 128 aa6.2□□□□□ -1.42
COPS7A-218ENST00000543939 KRTAP2-1Q9BYU5 128 aa6.2□□□□□ -1.42
COPS7A-218ENST00000543939 KRTAP5-5Q701N2 237 aaPredicted RBP6.09□□□□□ -1.43
COPS7A-218ENST00000543939 LCE3BQ5TA77 95 aa6.05□□□□□ -1.44
COPS7A-218ENST00000543939 A0A0A0MQY5 61 aa6.02□□□□□ -1.45
COPS7A-218ENST00000543939 MT1AP04731 61 aa5.99□□□□□ -1.45
COPS7A-218ENST00000543939 KRTAP6-1Q3LI64 71 aa5.94□□□□□ -1.46
COPS7A-218ENST00000543939 KRTAP20-1Q3LI63 56 aa5.91□□□□□ -1.46
COPS7A-218ENST00000543939 KRTAP5-4Q6L8H1 288 aa5.76□□□□□ -1.49
COPS7A-218ENST00000543939 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
COPS7A-218ENST00000543939 KRTAP2-2Q9BYT5 123 aa5.74□□□□□ -1.49
COPS7A-218ENST00000543939 KRTAP9-4Q9BYQ2 154 aa5.68□□□□□ -1.5
COPS7A-218ENST00000543939 INE1O15225 51 aa5.64□□□□□ -1.51
COPS7A-218ENST00000543939 LCE4AQ5TA78 99 aa5.6□□□□□ -1.51
COPS7A-218ENST00000543939 KRTAP12-4P60329 112 aa5.59□□□□□ -1.51
COPS7A-218ENST00000543939 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
COPS7A-218ENST00000543939 MT4P47944 62 aa5.48□□□□□ -1.53
COPS7A-218ENST00000543939 KRTAP4-6Q9BYQ5 205 aa5.47□□□□□ -1.53
COPS7A-218ENST00000543939 KRTAP6-2Q3LI66 62 aa5.45□□□□□ -1.54
COPS7A-218ENST00000543939 MT3P25713 68 aa5.4□□□□□ -1.54
COPS7A-218ENST00000543939 LCE1DQ5T752 114 aa5.37□□□□□ -1.55
COPS7A-218ENST00000543939 KRTAP20-2Q3LI61 65 aa5.37□□□□□ -1.55
COPS7A-218ENST00000543939 LCE3DQ9BYE3 92 aa5.28□□□□□ -1.56
COPS7A-218ENST00000543939 HMCN1Q96RW7 5635 aa5.27□□□□□ -1.57
COPS7A-218ENST00000543939 KRTAP5-2Q701N4 177 aa5.24□□□□□ -1.57
COPS7A-218ENST00000543939 KRTAP5-3Q6L8H2 238 aa5.18□□□□□ -1.58
COPS7A-218ENST00000543939 LCE3EQ5T5B0 92 aa5.14□□□□□ -1.59
COPS7A-218ENST00000543939 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
COPS7A-218ENST00000543939 AHNAK2Q8IVF2 5795 aa4.79□□□□□ -1.64
COPS7A-218ENST00000543939 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
COPS7A-218ENST00000543939 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
COPS7A-218ENST00000543939 GPR98Q8WXG9 6306 aa4.61□□□□□ -1.67
COPS7A-218ENST00000543939 KRTAP5-10Q6L8G5 202 aa4.55□□□□□ -1.68
COPS7A-218ENST00000543939 PRM1P04553 51 aa4.55□□□□□ -1.68
COPS7A-218ENST00000543939 KRTAP5-1Q6L8H4 278 aa4.52□□□□□ -1.69
COPS7A-218ENST00000543939 KRTAP5-8O75690 187 aa4.46□□□□□ -1.7
COPS7A-218ENST00000543939 MUC5ACP98088 5654 aa4.39□□□□□ -1.71
COPS7A-218ENST00000543939 LCE1BQ5T7P3 118 aa4.38□□□□□ -1.71
COPS7A-218ENST00000543939 KRTAP4-2Q9BYR5 136 aa4.38□□□□□ -1.71
COPS7A-218ENST00000543939 LCE1CQ5T751 118 aa4.35□□□□□ -1.71
COPS7A-218ENST00000543939 KRTAP5-7Q6L8G8 165 aa4.35□□□□□ -1.71
COPS7A-218ENST00000543939 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
COPS7A-218ENST00000543939 KRTAP9-9Q9BYP9 154 aa4.01□□□□□ -1.77
COPS7A-218ENST00000543939 KRTAP21-2Q3LI59 83 aa3.9□□□□□ -1.79
COPS7A-218ENST00000543939 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
COPS7A-218ENST00000543939 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.8
COPS7A-218ENST00000543939 AHNAKQ09666 5890 aaKnown RBP3.76□□□□□ -1.81
COPS7A-218ENST00000543939 KRTAP4-12Q9BQ66 201 aa3.6□□□□□ -1.83
COPS7A-218ENST00000543939 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
COPS7A-218ENST00000543939 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
COPS7A-218ENST00000543939 PHGR1C9JFL3 82 aa3.3□□□□□ -1.88
COPS7A-218ENST00000543939 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
COPS7A-218ENST00000543939 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
COPS7A-218ENST00000543939 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms