RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 CRCT1Q9UGL9 99 aa5.85□□□□□ -1.47
PTPRO-209ENST00000543886 KRTAP9-6A8MVA2 160 aa5.84□□□□□ -1.47
PTPRO-209ENST00000543886 KRTAP19-3Q7Z4W3 81 aa5.78□□□□□ -1.48
PTPRO-209ENST00000543886 SPRR2FQ96RM1 72 aa5.75□□□□□ -1.49
PTPRO-209ENST00000543886 MUC12Q9UKN1 5478 aa5.74□□□□□ -1.49
PTPRO-209ENST00000543886 MT1GP13640 62 aa5.74□□□□□ -1.49
PTPRO-209ENST00000543886 MT1MQ8N339 61 aa5.7□□□□□ -1.5
PTPRO-209ENST00000543886 SYNE2Q8WXH0 6885 aaKnown RBP5.7□□□□□ -1.5
PTPRO-209ENST00000543886 KRTAP4-3Q9BYR4 195 aa5.65□□□□□ -1.5
PTPRO-209ENST00000543886 LCE5AQ5TCM9 118 aa5.62□□□□□ -1.51
PTPRO-209ENST00000543886 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
PTPRO-209ENST00000543886 KRTAP5-9P26371 169 aa5.54□□□□□ -1.52
PTPRO-209ENST00000543886 KRTAP2-3P0C7H8 128 aa5.53□□□□□ -1.52
PTPRO-209ENST00000543886 KRTAP2-4Q9BYR9 128 aa5.53□□□□□ -1.52
PTPRO-209ENST00000543886 KRTAP2-1Q9BYU5 128 aa5.53□□□□□ -1.52
PTPRO-209ENST00000543886 KRTAP9-6A0A140TA67 174 aa5.46□□□□□ -1.53
PTPRO-209ENST00000543886 MDN1Q9NU22 5596 aa5.46□□□□□ -1.54
PTPRO-209ENST00000543886 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.42□□□□□ -1.54
PTPRO-209ENST00000543886 LCE1AQ5T7P2 110 aa5.41□□□□□ -1.54
PTPRO-209ENST00000543886 DSTQ03001 7570 aaKnown RBP5.38□□□□□ -1.55
PTPRO-209ENST00000543886 SPRR2EP22531 72 aa5.36□□□□□ -1.55
PTPRO-209ENST00000543886 SPRR2BP35325 72 aa5.36□□□□□ -1.55
PTPRO-209ENST00000543886 SPRR2AP35326 72 aa5.36□□□□□ -1.55
PTPRO-209ENST00000543886 KRTAP6-3Q3LI67 103 aa5.32□□□□□ -1.56
PTPRO-209ENST00000543886 SPRR2DP22532 72 aa5.16□□□□□ -1.58
PTPRO-209ENST00000543886 MT1AP04731 61 aa5.09□□□□□ -1.59
PTPRO-209ENST00000543886 KRTAP5-5Q701N2 237 aaPredicted RBP5.08□□□□□ -1.6
PTPRO-209ENST00000543886 KRTAP6-1Q3LI64 71 aa5.08□□□□□ -1.6
PTPRO-209ENST00000543886 LCE3BQ5TA77 95 aa5.06□□□□□ -1.6
PTPRO-209ENST00000543886 KRTAP9-7A8MTY7 169 aa5.04□□□□□ -1.6
PTPRO-209ENST00000543886 NEBP20929 6669 aa5.03□□□□□ -1.6
PTPRO-209ENST00000543886 KRTAP12-4P60329 112 aa4.91□□□□□ -1.62
PTPRO-209ENST00000543886 KRTAP4-9Q9BYQ8 210 aa4.83□□□□□ -1.64
PTPRO-209ENST00000543886 SYNE1Q8NF91 8797 aaKnown RBP4.81□□□□□ -1.64
PTPRO-209ENST00000543886 KRTAP9-4Q9BYQ2 154 aa4.81□□□□□ -1.64
PTPRO-209ENST00000543886 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
PTPRO-209ENST00000543886 KRTAP5-4Q6L8H1 288 aa4.67□□□□□ -1.66
PTPRO-209ENST00000543886 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
PTPRO-209ENST00000543886 MT3P25713 68 aa4.6□□□□□ -1.67
PTPRO-209ENST00000543886 LCE3EQ5T5B0 92 aa4.59□□□□□ -1.67
PTPRO-209ENST00000543886 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
PTPRO-209ENST00000543886 LCE4AQ5TA78 99 aa4.52□□□□□ -1.69
PTPRO-209ENST00000543886 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
PTPRO-209ENST00000543886 MT4P47944 62 aa4.49□□□□□ -1.69
PTPRO-209ENST00000543886 KRTAP20-1Q3LI63 56 aa4.46□□□□□ -1.7
PTPRO-209ENST00000543886 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
PTPRO-209ENST00000543886 HMCN1Q96RW7 5635 aa4.37□□□□□ -1.71
PTPRO-209ENST00000543886 PRM1P04553 51 aa4.36□□□□□ -1.71
PTPRO-209ENST00000543886 LCE1DQ5T752 114 aa4.34□□□□□ -1.71
PTPRO-209ENST00000543886 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
PTPRO-209ENST00000543886 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
PTPRO-209ENST00000543886 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
PTPRO-209ENST00000543886 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
PTPRO-209ENST00000543886 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
PTPRO-209ENST00000543886 KRTAP9-9Q9BYP9 154 aa3.84□□□□□ -1.79
PTPRO-209ENST00000543886 AHNAK2Q8IVF2 5795 aa3.74□□□□□ -1.81
PTPRO-209ENST00000543886 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
PTPRO-209ENST00000543886 KRTAP4-11Q9BYQ6 195 aa3.74□□□□□ -1.81
PTPRO-209ENST00000543886 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
PTPRO-209ENST00000543886 KRTAP5-1Q6L8H4 278 aa3.69□□□□□ -1.82
PTPRO-209ENST00000543886 KRTAP5-10Q6L8G5 202 aa3.66□□□□□ -1.82
PTPRO-209ENST00000543886 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
PTPRO-209ENST00000543886 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
PTPRO-209ENST00000543886 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
PTPRO-209ENST00000543886 KRTAP5-7Q6L8G8 165 aa3.5□□□□□ -1.85
PTPRO-209ENST00000543886 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
PTPRO-209ENST00000543886 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
PTPRO-209ENST00000543886 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
PTPRO-209ENST00000543886 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
PTPRO-209ENST00000543886 MUC5BQ9HC84 5762 aaPredicted RBP3.15□□□□□ -1.91
PTPRO-209ENST00000543886 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
PTPRO-209ENST00000543886 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
PTPRO-209ENST00000543886 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
PTPRO-209ENST00000543886 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
PTPRO-209ENST00000543886 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
PTPRO-209ENST00000543886 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
PTPRO-209ENST00000543886 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 60.8 ms