RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 LCE2DQ5TA82 110 aaPredicted RBP4.1□□□□□ -1.75
SMG8-202ENST00000543872 MT1EP04732 61 aa4.1□□□□□ -1.75
SMG8-202ENST00000543872 KRTAP4-3Q9BYR4 195 aa4.09□□□□□ -1.75
SMG8-202ENST00000543872 MT1GP13640 62 aa4.07□□□□□ -1.76
SMG8-202ENST00000543872 FCGBPQ9Y6R7 5405 aaPredicted RBP4.01□□□□□ -1.77
SMG8-202ENST00000543872 KRTAP19-4Q3LI73 84 aa4□□□□□ -1.77
SMG8-202ENST00000543872 SYNE1Q8NF91 8797 aaKnown RBP3.99□□□□□ -1.77
SMG8-202ENST00000543872 KRTAP9-6A0A140TA67 174 aa3.98□□□□□ -1.77
SMG8-202ENST00000543872 DSTQ03001 7570 aaKnown RBP3.98□□□□□ -1.77
SMG8-202ENST00000543872 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
SMG8-202ENST00000543872 MUC12Q9UKN1 5478 aa3.93□□□□□ -1.78
SMG8-202ENST00000543872 KRTAP4-9Q9BYQ8 210 aa3.93□□□□□ -1.78
SMG8-202ENST00000543872 LCE3BQ5TA77 95 aa3.9□□□□□ -1.79
SMG8-202ENST00000543872 KRTAP19-6Q3LI70 58 aa3.83□□□□□ -1.8
SMG8-202ENST00000543872 MT1MQ8N339 61 aa3.82□□□□□ -1.8
SMG8-202ENST00000543872 KRTAP6-3Q3LI67 103 aa3.79□□□□□ -1.8
SMG8-202ENST00000543872 KRTAP9-7A8MTY7 169 aa3.79□□□□□ -1.8
SMG8-202ENST00000543872 PRM1P04553 51 aa3.79□□□□□ -1.8
SMG8-202ENST00000543872 MACF1Q9UPN3 7388 aaKnown RBP3.76□□□□□ -1.81
SMG8-202ENST00000543872 LCE1AQ5T7P2 110 aa3.76□□□□□ -1.81
SMG8-202ENST00000543872 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
SMG8-202ENST00000543872 KRTAP19-3Q7Z4W3 81 aa3.75□□□□□ -1.81
SMG8-202ENST00000543872 SYNE2Q8WXH0 6885 aaKnown RBP3.74□□□□□ -1.81
SMG8-202ENST00000543872 KRTAP2-2Q9BYT5 123 aa3.73□□□□□ -1.81
SMG8-202ENST00000543872 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.71□□□□□ -1.82
SMG8-202ENST00000543872 MUC19Q7Z5P9 8384 aa3.71□□□□□ -1.82
SMG8-202ENST00000543872 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
SMG8-202ENST00000543872 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
SMG8-202ENST00000543872 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.83
SMG8-202ENST00000543872 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
SMG8-202ENST00000543872 MT1AP04731 61 aa3.61□□□□□ -1.83
SMG8-202ENST00000543872 KRTAP6-1Q3LI64 71 aa3.61□□□□□ -1.83
SMG8-202ENST00000543872 SPRR2FQ96RM1 72 aa3.57□□□□□ -1.84
SMG8-202ENST00000543872 LCE5AQ5TCM9 118 aa3.52□□□□□ -1.85
SMG8-202ENST00000543872 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
SMG8-202ENST00000543872 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
SMG8-202ENST00000543872 MDN1Q9NU22 5596 aa3.44□□□□□ -1.86
SMG8-202ENST00000543872 SPRR2EP22531 72 aa3.43□□□□□ -1.86
SMG8-202ENST00000543872 SPRR2BP35325 72 aa3.43□□□□□ -1.86
SMG8-202ENST00000543872 SPRR2AP35326 72 aa3.43□□□□□ -1.86
SMG8-202ENST00000543872 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
SMG8-202ENST00000543872 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
SMG8-202ENST00000543872 NEBP20929 6669 aa3.32□□□□□ -1.88
SMG8-202ENST00000543872 SPRR2DP22532 72 aa3.3□□□□□ -1.88
SMG8-202ENST00000543872 KRTAP9-4Q9BYQ2 154 aa3.22□□□□□ -1.89
SMG8-202ENST00000543872 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
SMG8-202ENST00000543872 MT3P25713 68 aa3.12□□□□□ -1.91
SMG8-202ENST00000543872 LCE4AQ5TA78 99 aa3.08□□□□□ -1.92
SMG8-202ENST00000543872 MT4P47944 62 aa2.95□□□□□ -1.94
SMG8-202ENST00000543872 KRTAP9-9Q9BYP9 154 aa2.9□□□□□ -1.94
SMG8-202ENST00000543872 KRTAP4-11Q9BYQ6 195 aa2.86□□□□□ -1.95
SMG8-202ENST00000543872 KRTAP4-6Q9BYQ5 205 aa2.81□□□□□ -1.96
SMG8-202ENST00000543872 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
SMG8-202ENST00000543872 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
SMG8-202ENST00000543872 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
SMG8-202ENST00000543872 KRTAP20-2Q3LI61 65 aa2.66□□□□□ -1.98
SMG8-202ENST00000543872 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
SMG8-202ENST00000543872 GPR98Q8WXG9 6306 aa2.59□□□□□ -2
SMG8-202ENST00000543872 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -2
SMG8-202ENST00000543872 KRTAP5-3Q6L8H2 238 aa2.52□□□□□ -2.01
SMG8-202ENST00000543872 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
SMG8-202ENST00000543872 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
SMG8-202ENST00000543872 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.02
SMG8-202ENST00000543872 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
SMG8-202ENST00000543872 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
SMG8-202ENST00000543872 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
SMG8-202ENST00000543872 KRTAP4-2Q9BYR5 136 aa2.28□□□□□ -2.04
SMG8-202ENST00000543872 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
SMG8-202ENST00000543872 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
SMG8-202ENST00000543872 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
SMG8-202ENST00000543872 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.07
SMG8-202ENST00000543872 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
SMG8-202ENST00000543872 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
SMG8-202ENST00000543872 KRTAP4-12Q9BQ66 201 aa1.98□□□□□ -2.09
SMG8-202ENST00000543872 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.12
SMG8-202ENST00000543872 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
SMG8-202ENST00000543872 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 58.8 ms