RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 PRR15LQ9BU68 103 aa2.64□□□□□ -1.99
NUP43-206ENST00000543637 MT1GP13640 62 aa2.62□□□□□ -1.99
NUP43-206ENST00000543637 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
NUP43-206ENST00000543637 CYSTM1Q9H1C7 97 aa2.62□□□□□ -1.99
NUP43-206ENST00000543637 TNP1P09430 55 aa2.61□□□□□ -1.99
NUP43-206ENST00000543637 KRTAP19-5Q3LI72 72 aa2.61□□□□□ -1.99
NUP43-206ENST00000543637 A8MU10 97 aa2.6□□□□□ -1.99
NUP43-206ENST00000543637 ATP5EP56381 51 aaPredicted RBP2.59□□□□□ -1.99
NUP43-206ENST00000543637 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
NUP43-206ENST00000543637 C10orf95Q9H7T3 257 aa2.55□□□□□ -2
NUP43-206ENST00000543637 CCDC179H3BU77 68 aa2.54□□□□□ -2
NUP43-206ENST00000543637 LCE3AQ5TA76 89 aa2.54□□□□□ -2
NUP43-206ENST00000543637 LINC01558Q9Y6Z2 57 aa2.54□□□□□ -2
NUP43-206ENST00000543637 UQCR11O14957 56 aa2.53□□□□□ -2
NUP43-206ENST00000543637 MT1MQ8N339 61 aa2.53□□□□□ -2
NUP43-206ENST00000543637 MT1LQ93083 61 aa2.53□□□□□ -2
NUP43-206ENST00000543637 MT4P47944 62 aa2.49□□□□□ -2.01
NUP43-206ENST00000543637 K7ERS5 55 aa2.48□□□□□ -2.01
NUP43-206ENST00000543637 TMEM258P61165 79 aa2.48□□□□□ -2.01
NUP43-206ENST00000543637 DSTQ03001 7570 aaKnown RBP2.46□□□□□ -2.02
NUP43-206ENST00000543637 KRTAP12-3P60328 96 aa2.46□□□□□ -2.02
NUP43-206ENST00000543637 MIR22HGQ0VDD5 57 aa2.45□□□□□ -2.02
NUP43-206ENST00000543637 KRTAP4-3Q9BYR4 195 aa2.45□□□□□ -2.02
NUP43-206ENST00000543637 KRTAP25-1Q3LHN0 102 aa2.43□□□□□ -2.02
NUP43-206ENST00000543637 V9GYY9 64 aa2.42□□□□□ -2.02
NUP43-206ENST00000543637 KRTAP5-4Q6L8H1 288 aa2.41□□□□□ -2.02
NUP43-206ENST00000543637 LCE1EQ5T753 118 aa2.39□□□□□ -2.03
NUP43-206ENST00000543637 PSPHP1O15172 72 aa2.36□□□□□ -2.03
NUP43-206ENST00000543637 Q1T7F1 81 aa2.34□□□□□ -2.03
NUP43-206ENST00000543637 KRTAP12-4P60329 112 aa2.33□□□□□ -2.04
NUP43-206ENST00000543637 A6NED7 52 aa2.31□□□□□ -2.04
NUP43-206ENST00000543637 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
NUP43-206ENST00000543637 SPRR5A0A1B0GTR4 108 aa2.3□□□□□ -2.04
NUP43-206ENST00000543637 KRTAP20-2Q3LI61 65 aa2.3□□□□□ -2.04
NUP43-206ENST00000543637 CDC42SE1Q9NRR8 79 aa2.3□□□□□ -2.04
NUP43-206ENST00000543637 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
NUP43-206ENST00000543637 HMCN1Q96RW7 5635 aa2.27□□□□□ -2.05
NUP43-206ENST00000543637 RPS28P62857 69 aaKnown RBP2.27□□□□□ -2.05
NUP43-206ENST00000543637 LCE3CQ5T5A8 94 aa2.27□□□□□ -2.05
NUP43-206ENST00000543637 PCP4P48539 62 aa2.25□□□□□ -2.05
NUP43-206ENST00000543637 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
NUP43-206ENST00000543637 ROMO1P60602 79 aa2.24□□□□□ -2.05
NUP43-206ENST00000543637 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
NUP43-206ENST00000543637 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
NUP43-206ENST00000543637 A0A0A0MQY5 61 aa2.19□□□□□ -2.06
NUP43-206ENST00000543637 AHNAK2Q8IVF2 5795 aa2.19□□□□□ -2.06
NUP43-206ENST00000543637 MT1AP04731 61 aa2.17□□□□□ -2.06
NUP43-206ENST00000543637 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
NUP43-206ENST00000543637 KRTAP6-1Q3LI64 71 aa2.14□□□□□ -2.07
NUP43-206ENST00000543637 SYNE1Q8NF91 8797 aaKnown RBP2.11□□□□□ -2.07
NUP43-206ENST00000543637 MT3P25713 68 aa2.11□□□□□ -2.07
NUP43-206ENST00000543637 KRTAP9-6A8MVA2 160 aa2.1□□□□□ -2.07
NUP43-206ENST00000543637 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.07
NUP43-206ENST00000543637 KRTAP6-2Q3LI66 62 aa2.06□□□□□ -2.08
NUP43-206ENST00000543637 OBSCNQ5VST9 7968 aa2.04□□□□□ -2.08
NUP43-206ENST00000543637 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
NUP43-206ENST00000543637 LCE1FQ5T754 118 aa1.95□□□□□ -2.1
NUP43-206ENST00000543637 BRK1Q8WUW1 75 aa1.93□□□□□ -2.1
NUP43-206ENST00000543637 PMAIP1Q13794 54 aa1.84□□□□□ -2.11
NUP43-206ENST00000543637 MUC5ACP98088 5654 aa1.81□□□□□ -2.12
NUP43-206ENST00000543637 PRAC1Q96KF2 57 aa1.79□□□□□ -2.12
NUP43-206ENST00000543637 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
NUP43-206ENST00000543637 LCE1BQ5T7P3 118 aa1.75□□□□□ -2.13
NUP43-206ENST00000543637 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
NUP43-206ENST00000543637 LCE1CQ5T751 118 aa1.7□□□□□ -2.14
NUP43-206ENST00000543637 LCE3EQ5T5B0 92 aa1.67□□□□□ -2.14
NUP43-206ENST00000543637 LCE3DQ9BYE3 92 aa1.65□□□□□ -2.15
NUP43-206ENST00000543637 PRO0628Q9UI54 55 aa1.61□□□□□ -2.15
NUP43-206ENST00000543637 LUZP6Q538Z0 58 aa1.56□□□□□ -2.16
NUP43-206ENST00000543637 NDUFAF8A1L188 74 aa1.55□□□□□ -2.16
NUP43-206ENST00000543637 KTN1-AS1Q86SY8 53 aa1.55□□□□□ -2.16
NUP43-206ENST00000543637 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
NUP43-206ENST00000543637 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
NUP43-206ENST00000543637 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
NUP43-206ENST00000543637 PRM1P04553 51 aa1.12□□□□□ -2.23
NUP43-206ENST00000543637 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
NUP43-206ENST00000543637 INE1O15225 51 aa0.93□□□□□ -2.26
NUP43-206ENST00000543637 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 56.5 ms