RNA–Protein interactions for RNA: ENST00000543610.5

CCDC189-206, Transcript of coiled-coil domain containing 189, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC189, Length 1,967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-206ENST00000543610 KRTAP19-4Q3LI73 84 aa7.36□□□□□ -1.23
CCDC189-206ENST00000543610 KRTAP9-6A8MVA2 160 aa7.33□□□□□ -1.24
CCDC189-206ENST00000543610 SYNE2Q8WXH0 6885 aaKnown RBP7.22□□□□□ -1.25
CCDC189-206ENST00000543610 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.22□□□□□ -1.25
CCDC189-206ENST00000543610 MUC12Q9UKN1 5478 aa7.12□□□□□ -1.27
CCDC189-206ENST00000543610 KRTAP19-3Q7Z4W3 81 aa7.11□□□□□ -1.27
CCDC189-206ENST00000543610 MT1GP13640 62 aa7.06□□□□□ -1.28
CCDC189-206ENST00000543610 MT1MQ8N339 61 aa7.05□□□□□ -1.28
CCDC189-206ENST00000543610 KRTAP4-3Q9BYR4 195 aa7.05□□□□□ -1.28
CCDC189-206ENST00000543610 SPRR2FQ96RM1 72 aa7.04□□□□□ -1.28
CCDC189-206ENST00000543610 KRTAP5-9P26371 169 aa7.02□□□□□ -1.29
CCDC189-206ENST00000543610 KRTAP6-3Q3LI67 103 aa6.98□□□□□ -1.29
CCDC189-206ENST00000543610 LCE5AQ5TCM9 118 aa6.93□□□□□ -1.3
CCDC189-206ENST00000543610 LOC100996750A0A140TA64 210 aa6.92□□□□□ -1.3
CCDC189-206ENST00000543610 KRTAP2-3P0C7H8 128 aa6.91□□□□□ -1.3
CCDC189-206ENST00000543610 KRTAP2-4Q9BYR9 128 aa6.91□□□□□ -1.3
CCDC189-206ENST00000543610 KRTAP2-1Q9BYU5 128 aa6.91□□□□□ -1.3
CCDC189-206ENST00000543610 MDN1Q9NU22 5596 aa6.89□□□□□ -1.31
CCDC189-206ENST00000543610 KRTAP9-7A8MTY7 169 aa6.88□□□□□ -1.31
CCDC189-206ENST00000543610 INE1O15225 51 aa6.8□□□□□ -1.32
CCDC189-206ENST00000543610 LCE1AQ5T7P2 110 aa6.76□□□□□ -1.33
CCDC189-206ENST00000543610 SPRR2EP22531 72 aa6.71□□□□□ -1.33
CCDC189-206ENST00000543610 SPRR2BP35325 72 aa6.71□□□□□ -1.33
CCDC189-206ENST00000543610 SPRR2AP35326 72 aa6.71□□□□□ -1.33
CCDC189-206ENST00000543610 DSTQ03001 7570 aaKnown RBP6.68□□□□□ -1.34
CCDC189-206ENST00000543610 NEBP20929 6669 aa6.57□□□□□ -1.36
CCDC189-206ENST00000543610 SPRR2DP22532 72 aa6.46□□□□□ -1.37
CCDC189-206ENST00000543610 KRTAP6-1Q3LI64 71 aa6.31□□□□□ -1.4
CCDC189-206ENST00000543610 KRTAP5-5Q701N2 237 aaPredicted RBP6.29□□□□□ -1.4
CCDC189-206ENST00000543610 MT1AP04731 61 aa6.28□□□□□ -1.4
CCDC189-206ENST00000543610 LCE3BQ5TA77 95 aa6.28□□□□□ -1.4
CCDC189-206ENST00000543610 KRTAP20-1Q3LI63 56 aa6.07□□□□□ -1.44
CCDC189-206ENST00000543610 KRTAP4-9Q9BYQ8 210 aa6.06□□□□□ -1.44
CCDC189-206ENST00000543610 SYNE1Q8NF91 8797 aaKnown RBP6.04□□□□□ -1.44
CCDC189-206ENST00000543610 KRTAP12-4P60329 112 aa6□□□□□ -1.45
CCDC189-206ENST00000543610 KRTAP2-2Q9BYT5 123 aa5.99□□□□□ -1.45
CCDC189-206ENST00000543610 KRTAP9-4Q9BYQ2 154 aa5.94□□□□□ -1.46
CCDC189-206ENST00000543610 KRTAP5-4Q6L8H1 288 aa5.82□□□□□ -1.48
CCDC189-206ENST00000543610 LCE3DQ9BYE3 92 aa5.81□□□□□ -1.48
CCDC189-206ENST00000543610 KRTAP6-2Q3LI66 62 aa5.72□□□□□ -1.49
CCDC189-206ENST00000543610 LCE4AQ5TA78 99 aa5.72□□□□□ -1.49
CCDC189-206ENST00000543610 LCE3EQ5T5B0 92 aa5.7□□□□□ -1.5
CCDC189-206ENST00000543610 MT3P25713 68 aa5.65□□□□□ -1.51
CCDC189-206ENST00000543610 MT4P47944 62 aa5.64□□□□□ -1.51
CCDC189-206ENST00000543610 KRTAP4-6Q9BYQ5 205 aa5.61□□□□□ -1.51
CCDC189-206ENST00000543610 LCE1DQ5T752 114 aa5.58□□□□□ -1.52
CCDC189-206ENST00000543610 HMCN1Q96RW7 5635 aa5.56□□□□□ -1.52
CCDC189-206ENST00000543610 KRTAP20-2Q3LI61 65 aa5.46□□□□□ -1.54
CCDC189-206ENST00000543610 OBSCNQ5VST9 7968 aa5.35□□□□□ -1.55
CCDC189-206ENST00000543610 KRTAP5-2Q701N4 177 aa5.3□□□□□ -1.56
CCDC189-206ENST00000543610 KRTAP5-3Q6L8H2 238 aa5.28□□□□□ -1.56
CCDC189-206ENST00000543610 PRM1P04553 51 aa5.26□□□□□ -1.57
CCDC189-206ENST00000543610 AHNAK2Q8IVF2 5795 aa5.02□□□□□ -1.61
CCDC189-206ENST00000543610 GPR98Q8WXG9 6306 aa4.88□□□□□ -1.63
CCDC189-206ENST00000543610 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
CCDC189-206ENST00000543610 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
CCDC189-206ENST00000543610 KRTAP5-10Q6L8G5 202 aa4.74□□□□□ -1.65
CCDC189-206ENST00000543610 MUC5ACP98088 5654 aa4.67□□□□□ -1.66
CCDC189-206ENST00000543610 KRTAP5-8O75690 187 aa4.62□□□□□ -1.67
CCDC189-206ENST00000543610 LCE1BQ5T7P3 118 aa4.6□□□□□ -1.67
CCDC189-206ENST00000543610 KRTAP5-1Q6L8H4 278 aa4.59□□□□□ -1.67
CCDC189-206ENST00000543610 KRTAP4-2Q9BYR5 136 aa4.49□□□□□ -1.69
CCDC189-206ENST00000543610 LCE1CQ5T751 118 aa4.46□□□□□ -1.7
CCDC189-206ENST00000543610 KRTAP5-7Q6L8G8 165 aa4.41□□□□□ -1.7
CCDC189-206ENST00000543610 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.2□□□□□ -1.74
CCDC189-206ENST00000543610 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
CCDC189-206ENST00000543610 KRTAP21-2Q3LI59 83 aa4.09□□□□□ -1.75
CCDC189-206ENST00000543610 MUC5BQ9HC84 5762 aaPredicted RBP4.05□□□□□ -1.76
CCDC189-206ENST00000543610 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
CCDC189-206ENST00000543610 AHNAKQ09666 5890 aaKnown RBP3.84□□□□□ -1.79
CCDC189-206ENST00000543610 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
CCDC189-206ENST00000543610 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
CCDC189-206ENST00000543610 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
CCDC189-206ENST00000543610 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
CCDC189-206ENST00000543610 KRTAP21-1Q3LI58 79 aa3.26□□□□□ -1.89
CCDC189-206ENST00000543610 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
CCDC189-206ENST00000543610 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 29.7 ms