RNA–Protein interactions for RNA: ENST00000543428.5

PSME3-204, Transcript of proteasome activator subunit 3, humanhuman

TSL 2

Gene PSME3, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-204ENST00000543428 LINC01558Q9Y6Z2 57 aa7.52□□□□□ -1.21
PSME3-204ENST00000543428 LCE1DQ5T752 114 aa7.51□□□□□ -1.21
PSME3-204ENST00000543428 LCE4AQ5TA78 99 aa7.48□□□□□ -1.21
PSME3-204ENST00000543428 MT4P47944 62 aa7.44□□□□□ -1.22
PSME3-204ENST00000543428 KRTAP4-3Q9BYR4 195 aa7.44□□□□□ -1.22
PSME3-204ENST00000543428 HMCN1Q96RW7 5635 aa7.41□□□□□ -1.22
PSME3-204ENST00000543428 UQCR11O14957 56 aa7.4□□□□□ -1.22
PSME3-204ENST00000543428 TMEM258P61165 79 aa7.37□□□□□ -1.23
PSME3-204ENST00000543428 KRTAP12-3P60328 96 aa7.35□□□□□ -1.23
PSME3-204ENST00000543428 KRTAP5-4Q6L8H1 288 aa7.28□□□□□ -1.24
PSME3-204ENST00000543428 KRTAP4-7Q9BYR0 210 aa7.25□□□□□ -1.25
PSME3-204ENST00000543428 MIR22HGQ0VDD5 57 aa7.23□□□□□ -1.25
PSME3-204ENST00000543428 AHNAK2Q8IVF2 5795 aa7.2□□□□□ -1.26
PSME3-204ENST00000543428 KRTAP25-1Q3LHN0 102 aa7.18□□□□□ -1.26
PSME3-204ENST00000543428 K7ERS5 55 aa7.17□□□□□ -1.26
PSME3-204ENST00000543428 V9GYY9 64 aa7.04□□□□□ -1.28
PSME3-204ENST00000543428 PSPHP1O15172 72 aa7.03□□□□□ -1.28
PSME3-204ENST00000543428 KRTAP4-12Q9BQ66 201 aa7.01□□□□□ -1.29
PSME3-204ENST00000543428 KRTAP5-10Q6L8G5 202 aa6.98□□□□□ -1.29
PSME3-204ENST00000543428 KRTAP5-5Q701N2 237 aaPredicted RBP6.96□□□□□ -1.3
PSME3-204ENST00000543428 Q1T7F1 81 aa6.94□□□□□ -1.3
PSME3-204ENST00000543428 KRTAP20-2Q3LI61 65 aa6.91□□□□□ -1.3
PSME3-204ENST00000543428 KRTAP19-4Q3LI73 84 aa6.91□□□□□ -1.3
PSME3-204ENST00000543428 KRTAP12-4P60329 112 aa6.89□□□□□ -1.31
PSME3-204ENST00000543428 SPRR5A0A1B0GTR4 108 aa6.87□□□□□ -1.31
PSME3-204ENST00000543428 KRTAP23-1A1A580 65 aa6.87□□□□□ -1.31
PSME3-204ENST00000543428 KRTAP9-9Q9BYP9 154 aa6.85□□□□□ -1.31
PSME3-204ENST00000543428 KRTAP9-4Q9BYQ2 154 aa6.85□□□□□ -1.31
PSME3-204ENST00000543428 KRTAP15-1Q3LI76 137 aa6.84□□□□□ -1.31
PSME3-204ENST00000543428 KRTAP5-3Q6L8H2 238 aa6.83□□□□□ -1.32
PSME3-204ENST00000543428 A6NED7 52 aa6.8□□□□□ -1.32
PSME3-204ENST00000543428 LCE3CQ5T5A8 94 aa6.76□□□□□ -1.33
PSME3-204ENST00000543428 KRTAP5-7Q6L8G8 165 aa6.74□□□□□ -1.33
PSME3-204ENST00000543428 CDC42SE1Q9NRR8 79 aa6.74□□□□□ -1.33
PSME3-204ENST00000543428 SYNE1Q8NF91 8797 aaKnown RBP6.64□□□□□ -1.35
PSME3-204ENST00000543428 ROMO1P60602 79 aa6.6□□□□□ -1.35
PSME3-204ENST00000543428 RPS28P62857 69 aaKnown RBP6.58□□□□□ -1.36
PSME3-204ENST00000543428 MT1AP04731 61 aa6.49□□□□□ -1.37
PSME3-204ENST00000543428 KRTAP6-1Q3LI64 71 aa6.45□□□□□ -1.38
PSME3-204ENST00000543428 KRTAP5-2Q701N4 177 aa6.36□□□□□ -1.39
PSME3-204ENST00000543428 KRTAP4-11Q9BYQ6 195 aa6.34□□□□□ -1.39
PSME3-204ENST00000543428 KRTAP9-6A8MVA2 160 aa6.32□□□□□ -1.4
PSME3-204ENST00000543428 KRTAP4-2Q9BYR5 136 aa6.23□□□□□ -1.41
PSME3-204ENST00000543428 PCP4P48539 62 aa6.21□□□□□ -1.42
PSME3-204ENST00000543428 KRTAP6-2Q3LI66 62 aa6.2□□□□□ -1.42
PSME3-204ENST00000543428 KRTAP5-8O75690 187 aa6.1□□□□□ -1.43
PSME3-204ENST00000543428 AHNAKQ09666 5890 aaKnown RBP5.98□□□□□ -1.45
PSME3-204ENST00000543428 OBSCNQ5VST9 7968 aa5.97□□□□□ -1.45
PSME3-204ENST00000543428 MT3P25713 68 aa5.97□□□□□ -1.45
PSME3-204ENST00000543428 MUC5ACP98088 5654 aa5.93□□□□□ -1.46
PSME3-204ENST00000543428 MUC5BQ9HC84 5762 aaPredicted RBP5.91□□□□□ -1.46
PSME3-204ENST00000543428 H3BS24 57 aa5.85□□□□□ -1.47
PSME3-204ENST00000543428 KRTAP5-1Q6L8H4 278 aa5.72□□□□□ -1.49
PSME3-204ENST00000543428 BRK1Q8WUW1 75 aa5.69□□□□□ -1.5
PSME3-204ENST00000543428 LCE1EQ5T753 118 aa5.47□□□□□ -1.53
PSME3-204ENST00000543428 PMAIP1Q13794 54 aa5.33□□□□□ -1.56
PSME3-204ENST00000543428 LCE1BQ5T7P3 118 aa5.21□□□□□ -1.58
PSME3-204ENST00000543428 PRAC1Q96KF2 57 aa5.16□□□□□ -1.58
PSME3-204ENST00000543428 LCE1CQ5T751 118 aa5.07□□□□□ -1.6
PSME3-204ENST00000543428 LCE3DQ9BYE3 92 aa4.86□□□□□ -1.63
PSME3-204ENST00000543428 PRO0628Q9UI54 55 aa4.74□□□□□ -1.65
PSME3-204ENST00000543428 KRTAP5-11Q6L8G4 156 aa4.6□□□□□ -1.67
PSME3-204ENST00000543428 KTN1-AS1Q86SY8 53 aa4.59□□□□□ -1.67
PSME3-204ENST00000543428 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.58□□□□□ -1.68
PSME3-204ENST00000543428 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
PSME3-204ENST00000543428 SVIPQ8NHG7 77 aa4.52□□□□□ -1.69
PSME3-204ENST00000543428 LCE1FQ5T754 118 aa4.51□□□□□ -1.69
PSME3-204ENST00000543428 LUZP6Q538Z0 58 aa4.45□□□□□ -1.7
PSME3-204ENST00000543428 KRTAP21-2Q3LI59 83 aa4.22□□□□□ -1.73
PSME3-204ENST00000543428 PHGR1C9JFL3 82 aa4.11□□□□□ -1.75
PSME3-204ENST00000543428 KRTAP4-4Q9BYR3 166 aa3.94□□□□□ -1.78
PSME3-204ENST00000543428 MUC19Q7Z5P9 8384 aa3.67□□□□□ -1.82
PSME3-204ENST00000543428 PRM1P04553 51 aa3.36□□□□□ -1.87
PSME3-204ENST00000543428 NDUFAF8A1L188 74 aa3.33□□□□□ -1.88
PSME3-204ENST00000543428 A0A0A0MQY5 61 aa3.25□□□□□ -1.89
PSME3-204ENST00000543428 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
PSME3-204ENST00000543428 MUC16Q8WXI7 14507 aa2.67□□□□□ -1.98
PSME3-204ENST00000543428 INE1O15225 51 aa2.63□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 13.7 ms