RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 KRTAP4-3Q9BYR4 195 aa7.68□□□□□ -1.18
SHD-201ENST00000543264 MT1GP13640 62 aa7.62□□□□□ -1.19
SHD-201ENST00000543264 LCE2DQ5TA82 110 aaPredicted RBP7.62□□□□□ -1.19
SHD-201ENST00000543264 FCGBPQ9Y6R7 5405 aaPredicted RBP7.57□□□□□ -1.2
SHD-201ENST00000543264 KRTAP19-6Q3LI70 58 aa7.56□□□□□ -1.2
SHD-201ENST00000543264 KRTAP12-4P60329 112 aa7.54□□□□□ -1.2
SHD-201ENST00000543264 CRCT1Q9UGL9 99 aa7.53□□□□□ -1.2
SHD-201ENST00000543264 KRTAP9-2Q9BYQ4 174 aa7.48□□□□□ -1.21
SHD-201ENST00000543264 MT1MQ8N339 61 aa7.41□□□□□ -1.22
SHD-201ENST00000543264 MUC12Q9UKN1 5478 aa7.41□□□□□ -1.22
SHD-201ENST00000543264 KRTAP19-3Q7Z4W3 81 aa7.33□□□□□ -1.24
SHD-201ENST00000543264 MACF1Q9UPN3 7388 aaKnown RBP7.27□□□□□ -1.25
SHD-201ENST00000543264 DSTQ03001 7570 aaKnown RBP7.23□□□□□ -1.25
SHD-201ENST00000543264 LCE3BQ5TA77 95 aa7.17□□□□□ -1.26
SHD-201ENST00000543264 KRTAP4-9Q9BYQ8 210 aa7.14□□□□□ -1.27
SHD-201ENST00000543264 SYNE2Q8WXH0 6885 aaKnown RBP7.13□□□□□ -1.27
SHD-201ENST00000543264 SYNE1Q8NF91 8797 aaKnown RBP7.02□□□□□ -1.29
SHD-201ENST00000543264 LCE5AQ5TCM9 118 aa7.01□□□□□ -1.29
SHD-201ENST00000543264 SPRR2FQ96RM1 72 aa6.92□□□□□ -1.3
SHD-201ENST00000543264 MT1AP04731 61 aa6.91□□□□□ -1.3
SHD-201ENST00000543264 MDN1Q9NU22 5596 aa6.87□□□□□ -1.31
SHD-201ENST00000543264 KRTAP6-1Q3LI64 71 aa6.86□□□□□ -1.31
SHD-201ENST00000543264 LCE3DQ9BYE3 92 aa6.84□□□□□ -1.31
SHD-201ENST00000543264 LCE3EQ5T5B0 92 aa6.78□□□□□ -1.32
SHD-201ENST00000543264 KRTAP9-6A0A140TA67 174 aa6.77□□□□□ -1.33
SHD-201ENST00000543264 KRTAP9-7A8MTY7 169 aa6.77□□□□□ -1.33
SHD-201ENST00000543264 PRM1P04553 51 aa6.72□□□□□ -1.33
SHD-201ENST00000543264 KRTAP5-5Q701N2 237 aaPredicted RBP6.72□□□□□ -1.33
SHD-201ENST00000543264 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.65□□□□□ -1.34
SHD-201ENST00000543264 KRTAP5-9P26371 169 aa6.59□□□□□ -1.35
SHD-201ENST00000543264 LCE1AQ5T7P2 110 aa6.51□□□□□ -1.37
SHD-201ENST00000543264 SPRR2EP22531 72 aa6.47□□□□□ -1.37
SHD-201ENST00000543264 SPRR2BP35325 72 aa6.47□□□□□ -1.37
SHD-201ENST00000543264 SPRR2AP35326 72 aa6.47□□□□□ -1.37
SHD-201ENST00000543264 KRTAP6-3Q3LI67 103 aa6.4□□□□□ -1.39
SHD-201ENST00000543264 KRTAP6-2Q3LI66 62 aa6.38□□□□□ -1.39
SHD-201ENST00000543264 KRTAP9-4Q9BYQ2 154 aa6.28□□□□□ -1.4
SHD-201ENST00000543264 OBSCNQ5VST9 7968 aa6.27□□□□□ -1.41
SHD-201ENST00000543264 SPRR2DP22532 72 aa6.2□□□□□ -1.42
SHD-201ENST00000543264 NEBP20929 6669 aa6.12□□□□□ -1.43
SHD-201ENST00000543264 MT3P25713 68 aa6.01□□□□□ -1.45
SHD-201ENST00000543264 KRTAP2-2Q9BYT5 123 aa5.95□□□□□ -1.46
SHD-201ENST00000543264 MT4P47944 62 aa5.53□□□□□ -1.52
SHD-201ENST00000543264 KRTAP5-4Q6L8H1 288 aa5.52□□□□□ -1.53
SHD-201ENST00000543264 KRTAP20-1Q3LI63 56 aa5.49□□□□□ -1.53
SHD-201ENST00000543264 KRTAP4-6Q9BYQ5 205 aa5.49□□□□□ -1.53
SHD-201ENST00000543264 HMCN1Q96RW7 5635 aa5.41□□□□□ -1.54
SHD-201ENST00000543264 LCE4AQ5TA78 99 aa5.32□□□□□ -1.56
SHD-201ENST00000543264 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
SHD-201ENST00000543264 KRTAP20-2Q3LI61 65 aa5.24□□□□□ -1.57
SHD-201ENST00000543264 MUC5ACP98088 5654 aa5.19□□□□□ -1.58
SHD-201ENST00000543264 LCE1EQ5T753 118 aa5.17□□□□□ -1.58
SHD-201ENST00000543264 KRTAP5-2Q701N4 177 aa5.12□□□□□ -1.59
SHD-201ENST00000543264 KRTAP4-11Q9BYQ6 195 aa5.07□□□□□ -1.6
SHD-201ENST00000543264 KRTAP5-3Q6L8H2 238 aa5.02□□□□□ -1.61
SHD-201ENST00000543264 KRTAP5-10Q6L8G5 202 aa4.91□□□□□ -1.62
SHD-201ENST00000543264 LCE1BQ5T7P3 118 aa4.9□□□□□ -1.63
SHD-201ENST00000543264 KRTAP5-1Q6L8H4 278 aa4.73□□□□□ -1.65
SHD-201ENST00000543264 AHNAK2Q8IVF2 5795 aa4.63□□□□□ -1.67
SHD-201ENST00000543264 KRTAP4-2Q9BYR5 136 aa4.54□□□□□ -1.68
SHD-201ENST00000543264 LCE1CQ5T751 118 aa4.49□□□□□ -1.69
SHD-201ENST00000543264 KRTAP21-2Q3LI59 83 aa4.37□□□□□ -1.71
SHD-201ENST00000543264 KRTAP5-8O75690 187 aa4.35□□□□□ -1.71
SHD-201ENST00000543264 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
SHD-201ENST00000543264 KRTAP21-1Q3LI58 79 aa4.21□□□□□ -1.74
SHD-201ENST00000543264 MUC19Q7Z5P9 8384 aa4.17□□□□□ -1.74
SHD-201ENST00000543264 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
SHD-201ENST00000543264 KRTAP4-4Q9BYR3 166 aa4.14□□□□□ -1.75
SHD-201ENST00000543264 GPR98Q8WXG9 6306 aa4.14□□□□□ -1.75
SHD-201ENST00000543264 KRTAP5-7Q6L8G8 165 aa4.07□□□□□ -1.76
SHD-201ENST00000543264 MUC5BQ9HC84 5762 aaPredicted RBP4.05□□□□□ -1.76
SHD-201ENST00000543264 KRTAP9-9Q9BYP9 154 aa3.84□□□□□ -1.79
SHD-201ENST00000543264 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
SHD-201ENST00000543264 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
SHD-201ENST00000543264 AHNAKQ09666 5890 aaKnown RBP3.39□□□□□ -1.87
SHD-201ENST00000543264 PHGR1C9JFL3 82 aa3.3□□□□□ -1.88
SHD-201ENST00000543264 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 99 ms