RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 KRTAP13-4Q3LI77 160 aa3.13□□□□□ -1.91
C2CD3-219ENST00000542930 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
C2CD3-219ENST00000542930 SNURFQ9Y675 71 aa3.1□□□□□ -1.91
C2CD3-219ENST00000542930 KRTAP5-8O75690 187 aa3.09□□□□□ -1.91
C2CD3-219ENST00000542930 SPTSSBQ8NFR3 76 aa3.09□□□□□ -1.91
C2CD3-219ENST00000542930 CHKB-CPT1BH3BT56 60 aa3.08□□□□□ -1.92
C2CD3-219ENST00000542930 SMIM20Q8N5G0 67 aa3.08□□□□□ -1.92
C2CD3-219ENST00000542930 C10orf95Q9H7T3 257 aa3.05□□□□□ -1.92
C2CD3-219ENST00000542930 SPANXA2-OT1Q8N9U9 137 aa3.03□□□□□ -1.92
C2CD3-219ENST00000542930 K7ERU9 68 aa3.02□□□□□ -1.93
C2CD3-219ENST00000542930 KRTAP15-1Q3LI76 137 aa2.99□□□□□ -1.93
C2CD3-219ENST00000542930 LCE3AQ5TA76 89 aa2.99□□□□□ -1.93
C2CD3-219ENST00000542930 COA5Q86WW8 74 aa2.99□□□□□ -1.93
C2CD3-219ENST00000542930 SERP2Q8N6R1 65 aa2.99□□□□□ -1.93
C2CD3-219ENST00000542930 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
C2CD3-219ENST00000542930 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
C2CD3-219ENST00000542930 SPATA8Q6RVD6 105 aa2.97□□□□□ -1.93
C2CD3-219ENST00000542930 PCP4P48539 62 aa2.92□□□□□ -1.94
C2CD3-219ENST00000542930 KRTAP12-1P59990 96 aa2.92□□□□□ -1.94
C2CD3-219ENST00000542930 SPINT4Q6UDR6 99 aa2.92□□□□□ -1.94
C2CD3-219ENST00000542930 A0A1B0GU33 70 aa2.9□□□□□ -1.95
C2CD3-219ENST00000542930 SERP1Q9Y6X1 66 aa2.89□□□□□ -1.95
C2CD3-219ENST00000542930 SEC61GP60059 68 aa2.88□□□□□ -1.95
C2CD3-219ENST00000542930 KRTAP12-3P60328 96 aa2.88□□□□□ -1.95
C2CD3-219ENST00000542930 H7BZZ5 65 aa2.87□□□□□ -1.95
C2CD3-219ENST00000542930 COX7CP15954 63 aa2.87□□□□□ -1.95
C2CD3-219ENST00000542930 A8MU10 97 aa2.85□□□□□ -1.95
C2CD3-219ENST00000542930 TNP1P09430 55 aa2.85□□□□□ -1.95
C2CD3-219ENST00000542930 A0A1B0GU69 56 aa2.8□□□□□ -1.96
C2CD3-219ENST00000542930 KRTAP6-1Q3LI64 71 aa2.79□□□□□ -1.96
C2CD3-219ENST00000542930 SMIM26A0A096LP01 95 aa2.78□□□□□ -1.96
C2CD3-219ENST00000542930 MT1AP04731 61 aa2.77□□□□□ -1.97
C2CD3-219ENST00000542930 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
C2CD3-219ENST00000542930 KRTAP6-2Q3LI66 62 aa2.76□□□□□ -1.97
C2CD3-219ENST00000542930 CCDC179H3BU77 68 aa2.72□□□□□ -1.97
C2CD3-219ENST00000542930 A0A0A0MQY5 61 aa2.71□□□□□ -1.98
C2CD3-219ENST00000542930 ANAPC13Q9BS18 74 aa2.71□□□□□ -1.98
C2CD3-219ENST00000542930 LINC01558Q9Y6Z2 57 aa2.67□□□□□ -1.98
C2CD3-219ENST00000542930 PRR15LQ9BU68 103 aa2.65□□□□□ -1.99
C2CD3-219ENST00000542930 ATP5EP56381 51 aaPredicted RBP2.62□□□□□ -1.99
C2CD3-219ENST00000542930 KRTAP25-1Q3LHN0 102 aa2.61□□□□□ -1.99
C2CD3-219ENST00000542930 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
C2CD3-219ENST00000542930 UQCR11O14957 56 aa2.58□□□□□ -2
C2CD3-219ENST00000542930 MT3P25713 68 aa2.57□□□□□ -2
C2CD3-219ENST00000542930 TMEM258P61165 79 aa2.55□□□□□ -2
C2CD3-219ENST00000542930 MIR22HGQ0VDD5 57 aa2.54□□□□□ -2
C2CD3-219ENST00000542930 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
C2CD3-219ENST00000542930 PSPHP1O15172 72 aa2.47□□□□□ -2.01
C2CD3-219ENST00000542930 KRTAP9-6A8MVA2 160 aa2.46□□□□□ -2.02
C2CD3-219ENST00000542930 K7ERS5 55 aa2.43□□□□□ -2.02
C2CD3-219ENST00000542930 Q1T7F1 81 aa2.42□□□□□ -2.02
C2CD3-219ENST00000542930 V9GYY9 64 aa2.38□□□□□ -2.03
C2CD3-219ENST00000542930 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
C2CD3-219ENST00000542930 A6NED7 52 aa2.34□□□□□ -2.03
C2CD3-219ENST00000542930 CDC42SE1Q9NRR8 79 aa2.34□□□□□ -2.03
C2CD3-219ENST00000542930 ROMO1P60602 79 aa2.32□□□□□ -2.04
C2CD3-219ENST00000542930 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
C2CD3-219ENST00000542930 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
C2CD3-219ENST00000542930 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.3□□□□□ -2.04
C2CD3-219ENST00000542930 RPS28P62857 69 aaKnown RBP2.28□□□□□ -2.04
C2CD3-219ENST00000542930 PRAC1Q96KF2 57 aa2.27□□□□□ -2.05
C2CD3-219ENST00000542930 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
C2CD3-219ENST00000542930 LCE1FQ5T754 118 aa2.19□□□□□ -2.06
C2CD3-219ENST00000542930 NDUFAF8A1L188 74 aa2.18□□□□□ -2.06
C2CD3-219ENST00000542930 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
C2CD3-219ENST00000542930 BRK1Q8WUW1 75 aa1.91□□□□□ -2.1
C2CD3-219ENST00000542930 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
C2CD3-219ENST00000542930 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
C2CD3-219ENST00000542930 LCE3DQ9BYE3 92 aa1.79□□□□□ -2.12
C2CD3-219ENST00000542930 PMAIP1Q13794 54 aa1.77□□□□□ -2.13
C2CD3-219ENST00000542930 LCE3EQ5T5B0 92 aa1.75□□□□□ -2.13
C2CD3-219ENST00000542930 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
C2CD3-219ENST00000542930 LUZP6Q538Z0 58 aa1.54□□□□□ -2.16
C2CD3-219ENST00000542930 PRO0628Q9UI54 55 aa1.54□□□□□ -2.16
C2CD3-219ENST00000542930 KTN1-AS1Q86SY8 53 aa1.51□□□□□ -2.17
C2CD3-219ENST00000542930 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
C2CD3-219ENST00000542930 PRM1P04553 51 aa1.21□□□□□ -2.22
C2CD3-219ENST00000542930 INE1O15225 51 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 46.2 ms