RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 LCE4AQ5TA78 99 aa6.06□□□□□ -1.44
LTBR-210ENST00000542830 LCE1DQ5T752 114 aa6.03□□□□□ -1.44
LTBR-210ENST00000542830 KRTAP12-3P60328 96 aa6.01□□□□□ -1.45
LTBR-210ENST00000542830 MIR22HGQ0VDD5 57 aa6.01□□□□□ -1.45
LTBR-210ENST00000542830 KRTAP4-3Q9BYR4 195 aa6□□□□□ -1.45
LTBR-210ENST00000542830 MT4P47944 62 aa5.96□□□□□ -1.46
LTBR-210ENST00000542830 GPR98Q8WXG9 6306 aa5.95□□□□□ -1.46
LTBR-210ENST00000542830 K7ERS5 55 aa5.95□□□□□ -1.46
LTBR-210ENST00000542830 KRTAP25-1Q3LHN0 102 aa5.94□□□□□ -1.46
LTBR-210ENST00000542830 V9GYY9 64 aa5.93□□□□□ -1.46
LTBR-210ENST00000542830 KRTAP5-4Q6L8H1 288 aa5.92□□□□□ -1.46
LTBR-210ENST00000542830 HMCN1Q96RW7 5635 aa5.88□□□□□ -1.47
LTBR-210ENST00000542830 KRTAP4-7Q9BYR0 210 aa5.86□□□□□ -1.47
LTBR-210ENST00000542830 PSPHP1O15172 72 aa5.84□□□□□ -1.47
LTBR-210ENST00000542830 Q1T7F1 81 aa5.84□□□□□ -1.47
LTBR-210ENST00000542830 KRTAP4-6Q9BYQ5 205 aa5.77□□□□□ -1.49
LTBR-210ENST00000542830 KRTAP19-4Q3LI73 84 aa5.75□□□□□ -1.49
LTBR-210ENST00000542830 KRTAP23-1A1A580 65 aa5.74□□□□□ -1.49
LTBR-210ENST00000542830 KRTAP5-5Q701N2 237 aaPredicted RBP5.68□□□□□ -1.5
LTBR-210ENST00000542830 A6NED7 52 aa5.67□□□□□ -1.5
LTBR-210ENST00000542830 AHNAK2Q8IVF2 5795 aa5.67□□□□□ -1.5
LTBR-210ENST00000542830 KRTAP15-1Q3LI76 137 aa5.62□□□□□ -1.51
LTBR-210ENST00000542830 KRTAP5-10Q6L8G5 202 aa5.61□□□□□ -1.51
LTBR-210ENST00000542830 CDC42SE1Q9NRR8 79 aa5.6□□□□□ -1.51
LTBR-210ENST00000542830 KRTAP20-2Q3LI61 65 aa5.59□□□□□ -1.51
LTBR-210ENST00000542830 SPRR5A0A1B0GTR4 108 aa5.58□□□□□ -1.52
LTBR-210ENST00000542830 KRTAP12-4P60329 112 aa5.58□□□□□ -1.52
LTBR-210ENST00000542830 LOC100996750A0A140TA64 210 aa5.56□□□□□ -1.52
LTBR-210ENST00000542830 LCE3CQ5T5A8 94 aa5.53□□□□□ -1.52
LTBR-210ENST00000542830 RPS28P62857 69 aaKnown RBP5.5□□□□□ -1.53
LTBR-210ENST00000542830 ROMO1P60602 79 aa5.49□□□□□ -1.53
LTBR-210ENST00000542830 KRTAP5-3Q6L8H2 238 aa5.49□□□□□ -1.53
LTBR-210ENST00000542830 SYNE1Q8NF91 8797 aaKnown RBP5.48□□□□□ -1.53
LTBR-210ENST00000542830 KRTAP5-7Q6L8G8 165 aa5.41□□□□□ -1.54
LTBR-210ENST00000542830 PCP4P48539 62 aa5.33□□□□□ -1.56
LTBR-210ENST00000542830 MT1AP04731 61 aa5.3□□□□□ -1.56
LTBR-210ENST00000542830 KRTAP6-1Q3LI64 71 aa5.24□□□□□ -1.57
LTBR-210ENST00000542830 KRTAP5-2Q701N4 177 aa5.18□□□□□ -1.58
LTBR-210ENST00000542830 KRTAP9-6A8MVA2 160 aa5.17□□□□□ -1.58
LTBR-210ENST00000542830 KRTAP9-4Q9BYQ2 154 aa5.12□□□□□ -1.59
LTBR-210ENST00000542830 KRTAP4-11Q9BYQ6 195 aa5.11□□□□□ -1.59
LTBR-210ENST00000542830 KRTAP6-2Q3LI66 62 aa5.01□□□□□ -1.61
LTBR-210ENST00000542830 KRTAP5-8O75690 187 aa4.93□□□□□ -1.62
LTBR-210ENST00000542830 MT3P25713 68 aa4.87□□□□□ -1.63
LTBR-210ENST00000542830 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
LTBR-210ENST00000542830 BRK1Q8WUW1 75 aa4.8□□□□□ -1.64
LTBR-210ENST00000542830 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
LTBR-210ENST00000542830 MUC5BQ9HC84 5762 aaPredicted RBP4.67□□□□□ -1.66
LTBR-210ENST00000542830 KRTAP5-1Q6L8H4 278 aa4.64□□□□□ -1.67
LTBR-210ENST00000542830 MUC5ACP98088 5654 aa4.64□□□□□ -1.67
LTBR-210ENST00000542830 AHNAKQ09666 5890 aaKnown RBP4.63□□□□□ -1.67
LTBR-210ENST00000542830 PMAIP1Q13794 54 aa4.52□□□□□ -1.69
LTBR-210ENST00000542830 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
LTBR-210ENST00000542830 PRAC1Q96KF2 57 aa4.34□□□□□ -1.71
LTBR-210ENST00000542830 KRTAP4-2Q9BYR5 136 aa4.2□□□□□ -1.74
LTBR-210ENST00000542830 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
LTBR-210ENST00000542830 LCE1CQ5T751 118 aa4.15□□□□□ -1.75
LTBR-210ENST00000542830 PRO0628Q9UI54 55 aa4.1□□□□□ -1.75
LTBR-210ENST00000542830 SVIPQ8NHG7 77 aa4.01□□□□□ -1.77
LTBR-210ENST00000542830 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
LTBR-210ENST00000542830 KTN1-AS1Q86SY8 53 aa3.96□□□□□ -1.78
LTBR-210ENST00000542830 KRTAP4-12Q9BQ66 201 aa3.78□□□□□ -1.8
LTBR-210ENST00000542830 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
LTBR-210ENST00000542830 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
LTBR-210ENST00000542830 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
LTBR-210ENST00000542830 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
LTBR-210ENST00000542830 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
LTBR-210ENST00000542830 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
LTBR-210ENST00000542830 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
LTBR-210ENST00000542830 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
LTBR-210ENST00000542830 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
LTBR-210ENST00000542830 NDUFAF8A1L188 74 aa2.86□□□□□ -1.95
LTBR-210ENST00000542830 H3BS24 57 aa2.82□□□□□ -1.96
LTBR-210ENST00000542830 PRM1P04553 51 aa2.79□□□□□ -1.96
LTBR-210ENST00000542830 A0A0A0MQY5 61 aa2.7□□□□□ -1.98
LTBR-210ENST00000542830 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
LTBR-210ENST00000542830 INE1O15225 51 aa2.35□□□□□ -2.03
LTBR-210ENST00000542830 MUC16Q8WXI7 14507 aa2.14□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 98.1 ms