RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 CRIPTQ9P021 101 aa1.64□□□□□ -2.15
SFSWAP-211ENST00000542813 CRCT1Q9UGL9 99 aa1.64□□□□□ -2.15
SFSWAP-211ENST00000542813 SPINK6Q6UWN8 80 aa1.61□□□□□ -2.15
SFSWAP-211ENST00000542813 DNAH8Q96JB1 4490 aa1.6□□□□□ -2.15
SFSWAP-211ENST00000542813 RPL37P61927 97 aaKnown RBP1.6□□□□□ -2.15
SFSWAP-211ENST00000542813 SPINK1P00995 79 aa1.59□□□□□ -2.15
SFSWAP-211ENST00000542813 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.15
SFSWAP-211ENST00000542813 PLAC4Q8WY50 150 aa1.59□□□□□ -2.15
SFSWAP-211ENST00000542813 MT1HL1P0DM35 61 aa1.58□□□□□ -2.16
SFSWAP-211ENST00000542813 KRTAP12-3P60328 96 aa1.57□□□□□ -2.16
SFSWAP-211ENST00000542813 KRTAP10-4P60372 401 aaPredicted RBP1.57□□□□□ -2.16
SFSWAP-211ENST00000542813 SYNE2Q8WXH0 6885 aaKnown RBP1.56□□□□□ -2.16
SFSWAP-211ENST00000542813 NEBP20929 6669 aa1.56□□□□□ -2.16
SFSWAP-211ENST00000542813 C10orf95Q9H7T3 257 aa1.56□□□□□ -2.16
SFSWAP-211ENST00000542813 SSPOA2VEC9 5147 aa1.55□□□□□ -2.16
SFSWAP-211ENST00000542813 LPAP08519 4548 aa1.55□□□□□ -2.16
SFSWAP-211ENST00000542813 USH2AO75445 5202 aa1.53□□□□□ -2.16
SFSWAP-211ENST00000542813 MACF1Q9UPN3 7388 aaKnown RBP1.52□□□□□ -2.17
SFSWAP-211ENST00000542813 S4R3F8 94 aa1.5□□□□□ -2.17
SFSWAP-211ENST00000542813 GPR98Q8WXG9 6306 aa1.5□□□□□ -2.17
SFSWAP-211ENST00000542813 A0A0D9SG42 100 aa1.48□□□□□ -2.17
SFSWAP-211ENST00000542813 FCGBPQ9Y6R7 5405 aaPredicted RBP1.48□□□□□ -2.17
SFSWAP-211ENST00000542813 MUC17Q685J3 4493 aa1.46□□□□□ -2.17
SFSWAP-211ENST00000542813 KRTAP12-4P60329 112 aa1.45□□□□□ -2.18
SFSWAP-211ENST00000542813 C9orf92A6NGG3 77 aa1.43□□□□□ -2.18
SFSWAP-211ENST00000542813 HMCN1Q96RW7 5635 aa1.43□□□□□ -2.18
SFSWAP-211ENST00000542813 M0QZ58 72 aa1.41□□□□□ -2.18
SFSWAP-211ENST00000542813 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
SFSWAP-211ENST00000542813 MDN1Q9NU22 5596 aa1.39□□□□□ -2.19
SFSWAP-211ENST00000542813 RPS29P62273 56 aaKnown RBP1.39□□□□□ -2.19
SFSWAP-211ENST00000542813 MUC12Q9UKN1 5478 aa1.39□□□□□ -2.19
SFSWAP-211ENST00000542813 MT1HP80294 61 aa1.38□□□□□ -2.19
SFSWAP-211ENST00000542813 KRTAP20-1Q3LI63 56 aa1.38□□□□□ -2.19
SFSWAP-211ENST00000542813 M0R2T5 61 aa1.37□□□□□ -2.19
SFSWAP-211ENST00000542813 KMT2DO14686 5537 aa1.35□□□□□ -2.19
SFSWAP-211ENST00000542813 KRTAP4-1Q9BYQ7 146 aa1.34□□□□□ -2.19
SFSWAP-211ENST00000542813 KRTAP19-2Q3LHN2 52 aa1.32□□□□□ -2.2
SFSWAP-211ENST00000542813 FLGP20930 4061 aaPredicted RBP1.32□□□□□ -2.2
SFSWAP-211ENST00000542813 KRTAP19-6Q3LI70 58 aa1.27□□□□□ -2.21
SFSWAP-211ENST00000542813 AHNAK2Q8IVF2 5795 aa1.27□□□□□ -2.21
SFSWAP-211ENST00000542813 KRTAP2-3P0C7H8 128 aa1.26□□□□□ -2.21
SFSWAP-211ENST00000542813 KRTAP2-4Q9BYR9 128 aa1.26□□□□□ -2.21
SFSWAP-211ENST00000542813 TNP1P09430 55 aa1.25□□□□□ -2.21
SFSWAP-211ENST00000542813 MT2AP02795 61 aa1.23□□□□□ -2.21
SFSWAP-211ENST00000542813 DSTQ03001 7570 aaKnown RBP1.21□□□□□ -2.22
SFSWAP-211ENST00000542813 MT1FP04733 61 aa1.21□□□□□ -2.22
SFSWAP-211ENST00000542813 KRTAP2-1Q9BYU5 128 aa1.21□□□□□ -2.22
SFSWAP-211ENST00000542813 AHNAKQ09666 5890 aaKnown RBP1.2□□□□□ -2.22
SFSWAP-211ENST00000542813 SPRR2EP22531 72 aa1.16□□□□□ -2.22
SFSWAP-211ENST00000542813 SPRR2BP35325 72 aa1.16□□□□□ -2.22
SFSWAP-211ENST00000542813 SPRR2AP35326 72 aa1.16□□□□□ -2.22
SFSWAP-211ENST00000542813 KRTAP8-1Q8IUC2 63 aa1.14□□□□□ -2.23
SFSWAP-211ENST00000542813 SPRR2DP22532 72 aa1.13□□□□□ -2.23
SFSWAP-211ENST00000542813 SPRR2FQ96RM1 72 aa1.13□□□□□ -2.23
SFSWAP-211ENST00000542813 MUC5BQ9HC84 5762 aaPredicted RBP1.1□□□□□ -2.23
SFSWAP-211ENST00000542813 SPRR2GQ9BYE4 73 aa1.09□□□□□ -2.23
SFSWAP-211ENST00000542813 MUC5ACP98088 5654 aa1.07□□□□□ -2.24
SFSWAP-211ENST00000542813 KRTAP5-10Q6L8G5 202 aa1.07□□□□□ -2.24
SFSWAP-211ENST00000542813 MT1XP80297 61 aa1.06□□□□□ -2.24
SFSWAP-211ENST00000542813 MT1BP07438 61 aa1.05□□□□□ -2.24
SFSWAP-211ENST00000542813 KRTAP19-8Q3LI54 63 aa1.04□□□□□ -2.24
SFSWAP-211ENST00000542813 KRTAP19-5Q3LI72 72 aa1.02□□□□□ -2.25
SFSWAP-211ENST00000542813 MT4P47944 62 aa1□□□□□ -2.25
SFSWAP-211ENST00000542813 KRTAP19-7Q3SYF9 63 aa0.94□□□□□ -2.26
SFSWAP-211ENST00000542813 MT1LQ93083 61 aa0.92□□□□□ -2.26
SFSWAP-211ENST00000542813 SYNE1Q8NF91 8797 aaKnown RBP0.91□□□□□ -2.26
SFSWAP-211ENST00000542813 MT1EP04732 61 aa0.9□□□□□ -2.27
SFSWAP-211ENST00000542813 PRM1P04553 51 aa0.89□□□□□ -2.27
SFSWAP-211ENST00000542813 KRTAP19-3Q7Z4W3 81 aa0.89□□□□□ -2.27
SFSWAP-211ENST00000542813 MT1AP04731 61 aa0.88□□□□□ -2.27
SFSWAP-211ENST00000542813 KRTAP20-2Q3LI61 65 aa0.88□□□□□ -2.27
SFSWAP-211ENST00000542813 MT1GP13640 62 aa0.87□□□□□ -2.27
SFSWAP-211ENST00000542813 MT1MQ8N339 61 aa0.83□□□□□ -2.28
SFSWAP-211ENST00000542813 KRTAP6-1Q3LI64 71 aa0.8□□□□□ -2.28
SFSWAP-211ENST00000542813 KRTAP6-2Q3LI66 62 aa0.8□□□□□ -2.28
SFSWAP-211ENST00000542813 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
SFSWAP-211ENST00000542813 PHGR1C9JFL3 82 aa0.65□□□□□ -2.31
SFSWAP-211ENST00000542813 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 41.8 ms