RNA–Protein interactions for RNA: ENST00000542611.5

NBR1-202, Transcript of NBR1, autophagy cargo receptor, humanhuman

TSL 2 BASIC

Gene NBR1, Length 2,703 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-202ENST00000542611 KRTAP9-6A8MVA2 160 aa4.3□□□□□ -1.72
NBR1-202ENST00000542611 KRTAP19-7Q3SYF9 63 aa4.24□□□□□ -1.73
NBR1-202ENST00000542611 MACF1Q9UPN3 7388 aaKnown RBP4.17□□□□□ -1.74
NBR1-202ENST00000542611 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.16□□□□□ -1.74
NBR1-202ENST00000542611 MT1EP04732 61 aa4.14□□□□□ -1.75
NBR1-202ENST00000542611 MUC12Q9UKN1 5478 aa4.12□□□□□ -1.75
NBR1-202ENST00000542611 MT1LQ93083 61 aa4.08□□□□□ -1.76
NBR1-202ENST00000542611 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
NBR1-202ENST00000542611 SYNE2Q8WXH0 6885 aaKnown RBP4.04□□□□□ -1.76
NBR1-202ENST00000542611 SPRR2FQ96RM1 72 aa3.99□□□□□ -1.77
NBR1-202ENST00000542611 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
NBR1-202ENST00000542611 KRTAP19-4Q3LI73 84 aa3.98□□□□□ -1.77
NBR1-202ENST00000542611 KRTAP19-3Q7Z4W3 81 aa3.94□□□□□ -1.78
NBR1-202ENST00000542611 DSTQ03001 7570 aaKnown RBP3.93□□□□□ -1.78
NBR1-202ENST00000542611 KRTAP4-3Q9BYR4 195 aa3.92□□□□□ -1.78
NBR1-202ENST00000542611 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
NBR1-202ENST00000542611 MT1MQ8N339 61 aa3.89□□□□□ -1.79
NBR1-202ENST00000542611 MT1GP13640 62 aa3.89□□□□□ -1.79
NBR1-202ENST00000542611 KRTAP20-1Q3LI63 56 aa3.87□□□□□ -1.79
NBR1-202ENST00000542611 LCE5AQ5TCM9 118 aa3.85□□□□□ -1.79
NBR1-202ENST00000542611 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.8
NBR1-202ENST00000542611 LOC100996750A0A140TA64 210 aa3.82□□□□□ -1.8
NBR1-202ENST00000542611 KRTAP5-9P26371 169 aa3.82□□□□□ -1.8
NBR1-202ENST00000542611 LCE1AQ5T7P2 110 aa3.76□□□□□ -1.81
NBR1-202ENST00000542611 SPRR2EP22531 72 aa3.72□□□□□ -1.81
NBR1-202ENST00000542611 SPRR2BP35325 72 aa3.72□□□□□ -1.81
NBR1-202ENST00000542611 SPRR2AP35326 72 aa3.72□□□□□ -1.81
NBR1-202ENST00000542611 NEBP20929 6669 aa3.62□□□□□ -1.83
NBR1-202ENST00000542611 KRTAP2-2Q9BYT5 123 aa3.62□□□□□ -1.83
NBR1-202ENST00000542611 PRM1P04553 51 aa3.61□□□□□ -1.83
NBR1-202ENST00000542611 GPR98Q8WXG9 6306 aa3.61□□□□□ -1.83
NBR1-202ENST00000542611 SPRR2DP22532 72 aa3.57□□□□□ -1.84
NBR1-202ENST00000542611 KRTAP4-9Q9BYQ8 210 aa3.56□□□□□ -1.84
NBR1-202ENST00000542611 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
NBR1-202ENST00000542611 LCE3BQ5TA77 95 aa3.5□□□□□ -1.85
NBR1-202ENST00000542611 SYNE1Q8NF91 8797 aaKnown RBP3.5□□□□□ -1.85
NBR1-202ENST00000542611 MT1AP04731 61 aa3.5□□□□□ -1.85
NBR1-202ENST00000542611 KRTAP6-1Q3LI64 71 aa3.48□□□□□ -1.85
NBR1-202ENST00000542611 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
NBR1-202ENST00000542611 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.86
NBR1-202ENST00000542611 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
NBR1-202ENST00000542611 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
NBR1-202ENST00000542611 KRTAP9-4Q9BYQ2 154 aa3.25□□□□□ -1.89
NBR1-202ENST00000542611 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
NBR1-202ENST00000542611 KRTAP5-7Q6L8G8 165 aa3.23□□□□□ -1.89
NBR1-202ENST00000542611 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
NBR1-202ENST00000542611 LCE1DQ5T752 114 aa3.2□□□□□ -1.9
NBR1-202ENST00000542611 MT4P47944 62 aa3.15□□□□□ -1.9
NBR1-202ENST00000542611 KRTAP4-6Q9BYQ5 205 aa3.14□□□□□ -1.91
NBR1-202ENST00000542611 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
NBR1-202ENST00000542611 MT3P25713 68 aa3.09□□□□□ -1.91
NBR1-202ENST00000542611 LCE4AQ5TA78 99 aa3.09□□□□□ -1.91
NBR1-202ENST00000542611 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.92
NBR1-202ENST00000542611 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
NBR1-202ENST00000542611 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
NBR1-202ENST00000542611 KRTAP20-2Q3LI61 65 aa3.04□□□□□ -1.92
NBR1-202ENST00000542611 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
NBR1-202ENST00000542611 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
NBR1-202ENST00000542611 KRTAP5-3Q6L8H2 238 aa2.92□□□□□ -1.94
NBR1-202ENST00000542611 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
NBR1-202ENST00000542611 KRTAP4-11Q9BYQ6 195 aa2.68□□□□□ -1.98
NBR1-202ENST00000542611 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
NBR1-202ENST00000542611 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
NBR1-202ENST00000542611 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
NBR1-202ENST00000542611 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
NBR1-202ENST00000542611 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
NBR1-202ENST00000542611 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
NBR1-202ENST00000542611 KRTAP9-9Q9BYP9 154 aa2.4□□□□□ -2.02
NBR1-202ENST00000542611 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
NBR1-202ENST00000542611 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.33□□□□□ -2.04
NBR1-202ENST00000542611 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
NBR1-202ENST00000542611 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
NBR1-202ENST00000542611 KRTAP5-11Q6L8G4 156 aa2.17□□□□□ -2.06
NBR1-202ENST00000542611 KRTAP4-12Q9BQ66 201 aa2.11□□□□□ -2.07
NBR1-202ENST00000542611 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
NBR1-202ENST00000542611 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
NBR1-202ENST00000542611 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 73.3 ms