RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
CCND1-205ENST00000542367 UQCR11O14957 56 aa5.69□□□□□ -1.5
CCND1-205ENST00000542367 LCE4AQ5TA78 99 aa5.68□□□□□ -1.5
CCND1-205ENST00000542367 MT4P47944 62 aa5.65□□□□□ -1.5
CCND1-205ENST00000542367 KRTAP12-3P60328 96 aa5.62□□□□□ -1.51
CCND1-205ENST00000542367 PCP4P48539 62 aa5.61□□□□□ -1.51
CCND1-205ENST00000542367 GPR98Q8WXG9 6306 aa5.59□□□□□ -1.51
CCND1-205ENST00000542367 KRTAP5-4Q6L8H1 288 aa5.57□□□□□ -1.52
CCND1-205ENST00000542367 KRTAP4-7Q9BYR0 210 aa5.57□□□□□ -1.52
CCND1-205ENST00000542367 MIR22HGQ0VDD5 57 aa5.56□□□□□ -1.52
CCND1-205ENST00000542367 HMCN1Q96RW7 5635 aa5.53□□□□□ -1.52
CCND1-205ENST00000542367 KRTAP25-1Q3LHN0 102 aa5.5□□□□□ -1.53
CCND1-205ENST00000542367 V9GYY9 64 aa5.5□□□□□ -1.53
CCND1-205ENST00000542367 Q1T7F1 81 aa5.49□□□□□ -1.53
CCND1-205ENST00000542367 KRTAP4-6Q9BYQ5 205 aa5.49□□□□□ -1.53
CCND1-205ENST00000542367 PSPHP1O15172 72 aa5.48□□□□□ -1.53
CCND1-205ENST00000542367 K7ERS5 55 aa5.46□□□□□ -1.54
CCND1-205ENST00000542367 RPS28P62857 69 aaKnown RBP5.43□□□□□ -1.54
CCND1-205ENST00000542367 AHNAK2Q8IVF2 5795 aa5.34□□□□□ -1.55
CCND1-205ENST00000542367 KRTAP5-5Q701N2 237 aaPredicted RBP5.34□□□□□ -1.55
CCND1-205ENST00000542367 KRTAP5-10Q6L8G5 202 aa5.31□□□□□ -1.56
CCND1-205ENST00000542367 A6NED7 52 aa5.3□□□□□ -1.56
CCND1-205ENST00000542367 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
CCND1-205ENST00000542367 LOC100996750A0A140TA64 210 aa5.28□□□□□ -1.56
CCND1-205ENST00000542367 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
CCND1-205ENST00000542367 KRTAP20-2Q3LI61 65 aa5.26□□□□□ -1.57
CCND1-205ENST00000542367 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
CCND1-205ENST00000542367 SPRR5A0A1B0GTR4 108 aa5.23□□□□□ -1.57
CCND1-205ENST00000542367 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
CCND1-205ENST00000542367 KRTAP5-3Q6L8H2 238 aa5.19□□□□□ -1.58
CCND1-205ENST00000542367 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
CCND1-205ENST00000542367 CDC42SE1Q9NRR8 79 aa5.17□□□□□ -1.58
CCND1-205ENST00000542367 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
CCND1-205ENST00000542367 KRTAP5-7Q6L8G8 165 aa5.1□□□□□ -1.59
CCND1-205ENST00000542367 ROMO1P60602 79 aa5.08□□□□□ -1.6
CCND1-205ENST00000542367 MT1AP04731 61 aa4.96□□□□□ -1.62
CCND1-205ENST00000542367 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
CCND1-205ENST00000542367 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
CCND1-205ENST00000542367 KRTAP5-2Q701N4 177 aa4.87□□□□□ -1.63
CCND1-205ENST00000542367 BRK1Q8WUW1 75 aa4.82□□□□□ -1.64
CCND1-205ENST00000542367 KRTAP9-4Q9BYQ2 154 aa4.82□□□□□ -1.64
CCND1-205ENST00000542367 KRTAP4-11Q9BYQ6 195 aa4.81□□□□□ -1.64
CCND1-205ENST00000542367 KRTAP6-2Q3LI66 62 aa4.73□□□□□ -1.65
CCND1-205ENST00000542367 KRTAP5-8O75690 187 aa4.66□□□□□ -1.66
CCND1-205ENST00000542367 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.67
CCND1-205ENST00000542367 MT3P25713 68 aa4.55□□□□□ -1.68
CCND1-205ENST00000542367 PMAIP1Q13794 54 aa4.54□□□□□ -1.68
CCND1-205ENST00000542367 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
CCND1-205ENST00000542367 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
CCND1-205ENST00000542367 PRO0628Q9UI54 55 aa4.38□□□□□ -1.71
CCND1-205ENST00000542367 MUC5ACP98088 5654 aa4.37□□□□□ -1.71
CCND1-205ENST00000542367 MUC5BQ9HC84 5762 aaPredicted RBP4.35□□□□□ -1.71
CCND1-205ENST00000542367 PRAC1Q96KF2 57 aa4.35□□□□□ -1.71
CCND1-205ENST00000542367 AHNAKQ09666 5890 aaKnown RBP4.32□□□□□ -1.72
CCND1-205ENST00000542367 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
CCND1-205ENST00000542367 KTN1-AS1Q86SY8 53 aa4.14□□□□□ -1.75
CCND1-205ENST00000542367 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
CCND1-205ENST00000542367 SVIPQ8NHG7 77 aa3.96□□□□□ -1.78
CCND1-205ENST00000542367 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
CCND1-205ENST00000542367 LCE1CQ5T751 118 aa3.88□□□□□ -1.79
CCND1-205ENST00000542367 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
CCND1-205ENST00000542367 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
CCND1-205ENST00000542367 LUZP6Q538Z0 58 aa3.6□□□□□ -1.83
CCND1-205ENST00000542367 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
CCND1-205ENST00000542367 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
CCND1-205ENST00000542367 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
CCND1-205ENST00000542367 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
CCND1-205ENST00000542367 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
CCND1-205ENST00000542367 H3BS24 57 aa3.24□□□□□ -1.89
CCND1-205ENST00000542367 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
CCND1-205ENST00000542367 PHGR1C9JFL3 82 aa3.1□□□□□ -1.91
CCND1-205ENST00000542367 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
CCND1-205ENST00000542367 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.96
CCND1-205ENST00000542367 A0A0A0MQY5 61 aa2.72□□□□□ -1.97
CCND1-205ENST00000542367 PRM1P04553 51 aa2.61□□□□□ -1.99
CCND1-205ENST00000542367 INE1O15225 51 aa2.52□□□□□ -2.01
CCND1-205ENST00000542367 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
CCND1-205ENST00000542367 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms