RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 LINC01558Q9Y6Z2 57 aa7.08□□□□□ -1.28
DDB1-220ENST00000542337 MT4P47944 62 aa7.01□□□□□ -1.29
DDB1-220ENST00000542337 UQCR11O14957 56 aa6.99□□□□□ -1.29
DDB1-220ENST00000542337 KRTAP4-3Q9BYR4 195 aa6.98□□□□□ -1.29
DDB1-220ENST00000542337 HMCN1Q96RW7 5635 aa6.95□□□□□ -1.3
DDB1-220ENST00000542337 KRTAP12-3P60328 96 aa6.93□□□□□ -1.3
DDB1-220ENST00000542337 TMEM258P61165 79 aa6.92□□□□□ -1.3
DDB1-220ENST00000542337 KRTAP5-4Q6L8H1 288 aa6.88□□□□□ -1.31
DDB1-220ENST00000542337 MIR22HGQ0VDD5 57 aa6.81□□□□□ -1.32
DDB1-220ENST00000542337 KRTAP4-7Q9BYR0 210 aa6.8□□□□□ -1.32
DDB1-220ENST00000542337 K7ERS5 55 aa6.79□□□□□ -1.32
DDB1-220ENST00000542337 KRTAP25-1Q3LHN0 102 aa6.78□□□□□ -1.32
DDB1-220ENST00000542337 KRTAP4-6Q9BYQ5 205 aa6.76□□□□□ -1.33
DDB1-220ENST00000542337 AHNAK2Q8IVF2 5795 aa6.73□□□□□ -1.33
DDB1-220ENST00000542337 V9GYY9 64 aa6.66□□□□□ -1.34
DDB1-220ENST00000542337 KRTAP5-10Q6L8G5 202 aa6.61□□□□□ -1.35
DDB1-220ENST00000542337 KRTAP19-4Q3LI73 84 aa6.6□□□□□ -1.35
DDB1-220ENST00000542337 PSPHP1O15172 72 aa6.59□□□□□ -1.35
DDB1-220ENST00000542337 KRTAP5-5Q701N2 237 aaPredicted RBP6.56□□□□□ -1.36
DDB1-220ENST00000542337 KRTAP12-4P60329 112 aa6.53□□□□□ -1.36
DDB1-220ENST00000542337 KRTAP23-1A1A580 65 aa6.52□□□□□ -1.37
DDB1-220ENST00000542337 Q1T7F1 81 aa6.52□□□□□ -1.37
DDB1-220ENST00000542337 KRTAP20-2Q3LI61 65 aa6.52□□□□□ -1.37
DDB1-220ENST00000542337 SPRR5A0A1B0GTR4 108 aa6.51□□□□□ -1.37
DDB1-220ENST00000542337 KRTAP5-3Q6L8H2 238 aa6.46□□□□□ -1.38
DDB1-220ENST00000542337 KRTAP15-1Q3LI76 137 aa6.45□□□□□ -1.38
DDB1-220ENST00000542337 LOC100996750A0A140TA64 210 aa6.44□□□□□ -1.38
DDB1-220ENST00000542337 A6NED7 52 aa6.39□□□□□ -1.39
DDB1-220ENST00000542337 KRTAP5-7Q6L8G8 165 aa6.39□□□□□ -1.39
DDB1-220ENST00000542337 LCE3CQ5T5A8 94 aa6.36□□□□□ -1.39
DDB1-220ENST00000542337 CDC42SE1Q9NRR8 79 aa6.35□□□□□ -1.39
DDB1-220ENST00000542337 SYNE1Q8NF91 8797 aaKnown RBP6.32□□□□□ -1.4
DDB1-220ENST00000542337 ROMO1P60602 79 aa6.22□□□□□ -1.41
DDB1-220ENST00000542337 RPS28P62857 69 aaKnown RBP6.22□□□□□ -1.41
DDB1-220ENST00000542337 MT1AP04731 61 aa6.11□□□□□ -1.43
DDB1-220ENST00000542337 KRTAP6-1Q3LI64 71 aa6.07□□□□□ -1.44
DDB1-220ENST00000542337 KRTAP5-2Q701N4 177 aa6□□□□□ -1.45
DDB1-220ENST00000542337 KRTAP4-11Q9BYQ6 195 aa6□□□□□ -1.45
DDB1-220ENST00000542337 KRTAP9-4Q9BYQ2 154 aa5.94□□□□□ -1.46
DDB1-220ENST00000542337 KRTAP9-6A8MVA2 160 aa5.92□□□□□ -1.46
DDB1-220ENST00000542337 KRTAP6-2Q3LI66 62 aa5.84□□□□□ -1.47
DDB1-220ENST00000542337 PCP4P48539 62 aa5.79□□□□□ -1.48
DDB1-220ENST00000542337 KRTAP5-8O75690 187 aa5.76□□□□□ -1.49
DDB1-220ENST00000542337 MT3P25713 68 aa5.65□□□□□ -1.5
DDB1-220ENST00000542337 OBSCNQ5VST9 7968 aa5.63□□□□□ -1.51
DDB1-220ENST00000542337 AHNAKQ09666 5890 aaKnown RBP5.58□□□□□ -1.52
DDB1-220ENST00000542337 KRTAP9-9Q9BYP9 154 aa5.57□□□□□ -1.52
DDB1-220ENST00000542337 MUC5BQ9HC84 5762 aaPredicted RBP5.55□□□□□ -1.52
DDB1-220ENST00000542337 MUC5ACP98088 5654 aa5.54□□□□□ -1.52
DDB1-220ENST00000542337 KRTAP5-1Q6L8H4 278 aa5.41□□□□□ -1.54
DDB1-220ENST00000542337 BRK1Q8WUW1 75 aa5.32□□□□□ -1.56
DDB1-220ENST00000542337 LCE1EQ5T753 118 aa5.19□□□□□ -1.58
DDB1-220ENST00000542337 PMAIP1Q13794 54 aa5.01□□□□□ -1.61
DDB1-220ENST00000542337 LCE1BQ5T7P3 118 aa4.92□□□□□ -1.62
DDB1-220ENST00000542337 KRTAP4-2Q9BYR5 136 aa4.86□□□□□ -1.63
DDB1-220ENST00000542337 LCE1CQ5T751 118 aa4.81□□□□□ -1.64
DDB1-220ENST00000542337 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
DDB1-220ENST00000542337 LCE3DQ9BYE3 92 aa4.59□□□□□ -1.67
DDB1-220ENST00000542337 KRTAP4-12Q9BQ66 201 aa4.47□□□□□ -1.69
DDB1-220ENST00000542337 PRO0628Q9UI54 55 aa4.44□□□□□ -1.7
DDB1-220ENST00000542337 KRTAP5-11Q6L8G4 156 aa4.35□□□□□ -1.71
DDB1-220ENST00000542337 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
DDB1-220ENST00000542337 LCE3EQ5T5B0 92 aa4.3□□□□□ -1.72
DDB1-220ENST00000542337 KTN1-AS1Q86SY8 53 aa4.3□□□□□ -1.72
DDB1-220ENST00000542337 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
DDB1-220ENST00000542337 LUZP6Q538Z0 58 aa4.22□□□□□ -1.73
DDB1-220ENST00000542337 SVIPQ8NHG7 77 aa4.21□□□□□ -1.74
DDB1-220ENST00000542337 KRTAP21-2Q3LI59 83 aa3.98□□□□□ -1.77
DDB1-220ENST00000542337 PHGR1C9JFL3 82 aa3.89□□□□□ -1.79
DDB1-220ENST00000542337 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
DDB1-220ENST00000542337 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
DDB1-220ENST00000542337 PRM1P04553 51 aa3.15□□□□□ -1.91
DDB1-220ENST00000542337 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
DDB1-220ENST00000542337 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
DDB1-220ENST00000542337 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
DDB1-220ENST00000542337 INE1O15225 51 aa2.49□□□□□ -2.01
DDB1-220ENST00000542337 A0A0A0MQY5 61 aa2.48□□□□□ -2.01
DDB1-220ENST00000542337 H3BS24 57 aa2.3□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 12.8 ms