RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 RNF213Q63HN8 5207 aa1.99□□□□□ -2.09
CIT-211ENST00000541841 A0A0D9SG42 100 aa1.98□□□□□ -2.09
CIT-211ENST00000541841 M0QZ58 72 aa1.98□□□□□ -2.09
CIT-211ENST00000541841 Q5VSD8 79 aa1.98□□□□□ -2.09
CIT-211ENST00000541841 CRCT1Q9UGL9 99 aa1.98□□□□□ -2.09
CIT-211ENST00000541841 VPS13BQ7Z7G8 4022 aa1.98□□□□□ -2.09
CIT-211ENST00000541841 SMR3BP02814 79 aaPredicted RBP1.96□□□□□ -2.1
CIT-211ENST00000541841 LRP2P98164 4655 aa1.93□□□□□ -2.1
CIT-211ENST00000541841 LRP1Q07954 4544 aaKnown RBP1.93□□□□□ -2.1
CIT-211ENST00000541841 KRTAP4-1Q9BYQ7 146 aa1.92□□□□□ -2.1
CIT-211ENST00000541841 KRTAP10-4P60372 401 aaPredicted RBP1.89□□□□□ -2.11
CIT-211ENST00000541841 C10orf95Q9H7T3 257 aa1.89□□□□□ -2.11
CIT-211ENST00000541841 PLAC4Q8WY50 150 aa1.88□□□□□ -2.11
CIT-211ENST00000541841 FAT3Q8TDW7 4589 aa1.88□□□□□ -2.11
CIT-211ENST00000541841 MT1HL1P0DM35 61 aa1.87□□□□□ -2.11
CIT-211ENST00000541841 PKHD1L1Q86WI1 4243 aa1.86□□□□□ -2.11
CIT-211ENST00000541841 DNAH8Q96JB1 4490 aa1.86□□□□□ -2.11
CIT-211ENST00000541841 MUC2Q02817 5179 aa1.86□□□□□ -2.11
CIT-211ENST00000541841 TNXBP22105 4242 aa1.85□□□□□ -2.11
CIT-211ENST00000541841 FAT4Q6V0I7 4981 aa1.85□□□□□ -2.11
CIT-211ENST00000541841 FSIP2Q5CZC0 6907 aa1.83□□□□□ -2.12
CIT-211ENST00000541841 LPAP08519 4548 aa1.78□□□□□ -2.12
CIT-211ENST00000541841 TNP1P09430 55 aa1.78□□□□□ -2.12
CIT-211ENST00000541841 FCGBPQ9Y6R7 5405 aaPredicted RBP1.76□□□□□ -2.13
CIT-211ENST00000541841 SYNE2Q8WXH0 6885 aaKnown RBP1.63□□□□□ -2.15
CIT-211ENST00000541841 MUC17Q685J3 4493 aa1.62□□□□□ -2.15
CIT-211ENST00000541841 MT1HP80294 61 aa1.6□□□□□ -2.15
CIT-211ENST00000541841 MACF1Q9UPN3 7388 aaKnown RBP1.59□□□□□ -2.15
CIT-211ENST00000541841 KRTAP19-2Q3LHN2 52 aa1.59□□□□□ -2.15
CIT-211ENST00000541841 SSPOA2VEC9 5147 aa1.58□□□□□ -2.16
CIT-211ENST00000541841 USH2AO75445 5202 aa1.58□□□□□ -2.16
CIT-211ENST00000541841 M0R2T5 61 aa1.56□□□□□ -2.16
CIT-211ENST00000541841 SPRR2GQ9BYE4 73 aa1.56□□□□□ -2.16
CIT-211ENST00000541841 KRTAP8-1Q8IUC2 63 aa1.55□□□□□ -2.16
CIT-211ENST00000541841 NEBP20929 6669 aa1.53□□□□□ -2.16
CIT-211ENST00000541841 FLGP20930 4061 aaPredicted RBP1.53□□□□□ -2.17
CIT-211ENST00000541841 KRTAP19-8Q3LI54 63 aa1.47□□□□□ -2.17
CIT-211ENST00000541841 MT2AP02795 61 aa1.46□□□□□ -2.18
CIT-211ENST00000541841 MUC12Q9UKN1 5478 aa1.45□□□□□ -2.18
CIT-211ENST00000541841 KRTAP19-6Q3LI70 58 aa1.45□□□□□ -2.18
CIT-211ENST00000541841 MT1FP04733 61 aa1.44□□□□□ -2.18
CIT-211ENST00000541841 KMT2DO14686 5537 aa1.43□□□□□ -2.18
CIT-211ENST00000541841 KRTAP20-1Q3LI63 56 aa1.43□□□□□ -2.18
CIT-211ENST00000541841 MDN1Q9NU22 5596 aa1.43□□□□□ -2.18
CIT-211ENST00000541841 MT1XP80297 61 aa1.4□□□□□ -2.19
CIT-211ENST00000541841 MT1BP07438 61 aa1.38□□□□□ -2.19
CIT-211ENST00000541841 KRTAP2-3P0C7H8 128 aa1.37□□□□□ -2.19
CIT-211ENST00000541841 KRTAP2-4Q9BYR9 128 aa1.37□□□□□ -2.19
CIT-211ENST00000541841 KRTAP19-5Q3LI72 72 aa1.35□□□□□ -2.19
CIT-211ENST00000541841 KRTAP2-1Q9BYU5 128 aa1.35□□□□□ -2.19
CIT-211ENST00000541841 GPR98Q8WXG9 6306 aa1.34□□□□□ -2.2
CIT-211ENST00000541841 DSTQ03001 7570 aaKnown RBP1.29□□□□□ -2.2
CIT-211ENST00000541841 SPRR2EP22531 72 aa1.28□□□□□ -2.2
CIT-211ENST00000541841 SPRR2BP35325 72 aa1.28□□□□□ -2.2
CIT-211ENST00000541841 SPRR2AP35326 72 aa1.28□□□□□ -2.2
CIT-211ENST00000541841 MT1EP04732 61 aa1.26□□□□□ -2.21
CIT-211ENST00000541841 SPRR2FQ96RM1 72 aa1.26□□□□□ -2.21
CIT-211ENST00000541841 MT1LQ93083 61 aa1.25□□□□□ -2.21
CIT-211ENST00000541841 SPRR2DP22532 72 aa1.24□□□□□ -2.21
CIT-211ENST00000541841 KRTAP19-7Q3SYF9 63 aa1.23□□□□□ -2.21
CIT-211ENST00000541841 MT1GP13640 62 aa1.19□□□□□ -2.22
CIT-211ENST00000541841 AHNAK2Q8IVF2 5795 aa1.19□□□□□ -2.22
CIT-211ENST00000541841 MT1AP04731 61 aa1.18□□□□□ -2.22
CIT-211ENST00000541841 KRTAP19-3Q7Z4W3 81 aa1.17□□□□□ -2.22
CIT-211ENST00000541841 MT1MQ8N339 61 aa1.14□□□□□ -2.23
CIT-211ENST00000541841 KRTAP5-10Q6L8G5 202 aa1.13□□□□□ -2.23
CIT-211ENST00000541841 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
CIT-211ENST00000541841 MT4P47944 62 aa1.1□□□□□ -2.23
CIT-211ENST00000541841 PRM1P04553 51 aa1.08□□□□□ -2.24
CIT-211ENST00000541841 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
CIT-211ENST00000541841 MUC5ACP98088 5654 aa1.03□□□□□ -2.24
CIT-211ENST00000541841 KRTAP6-1Q3LI64 71 aa1.02□□□□□ -2.25
CIT-211ENST00000541841 MUC5BQ9HC84 5762 aaPredicted RBP1.01□□□□□ -2.25
CIT-211ENST00000541841 KRTAP6-2Q3LI66 62 aa1.01□□□□□ -2.25
CIT-211ENST00000541841 KRTAP20-2Q3LI61 65 aa0.99□□□□□ -2.25
CIT-211ENST00000541841 SYNE1Q8NF91 8797 aaKnown RBP0.95□□□□□ -2.26
CIT-211ENST00000541841 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
CIT-211ENST00000541841 PHGR1C9JFL3 82 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 57.7 ms