RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, human

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB6A-208	ENST00000541795	KRTAP4-7	Q9BYR0	210 aa		6.49	□□□□□ -1.37
RAB6A-208	ENST00000541795	MACF1	Q9UPN3	7388 aa	Known RBP	6.48	□□□□□ -1.37
RAB6A-208	ENST00000541795	MT1E	P04732	61 aa		6.43	□□□□□ -1.38
RAB6A-208	ENST00000541795	SPRR2F	Q96RM1	72 aa		6.34	□□□□□ -1.4
RAB6A-208	ENST00000541795	LCE1D	Q5T752	114 aa		6.29	□□□□□ -1.4
RAB6A-208	ENST00000541795	MT1L	Q93083	61 aa		6.29	□□□□□ -1.4
RAB6A-208	ENST00000541795	SYNE2	Q8WXH0	6885 aa	Known RBP	6.27	□□□□□ -1.4
RAB6A-208	ENST00000541795	KRTAP5-9	P26371	169 aa		6.26	□□□□□ -1.41
RAB6A-208	ENST00000541795	MUC12	Q9UKN1	5478 aa		6.25	□□□□□ -1.41
RAB6A-208	ENST00000541795	LCE3C	Q5T5A8	94 aa		6.19	□□□□□ -1.42
RAB6A-208	ENST00000541795	KRTAP4-9	Q9BYQ8	210 aa		6.19	□□□□□ -1.42
RAB6A-208	ENST00000541795	KRTAP4-2	Q9BYR5	136 aa		6.19	□□□□□ -1.42
RAB6A-208	ENST00000541795	KRTAP19-4	Q3LI73	84 aa		6.18	□□□□□ -1.42
RAB6A-208	ENST00000541795	KRTAP19-3	Q7Z4W3	81 aa		6.18	□□□□□ -1.42
RAB6A-208	ENST00000541795	KRTAP6-3	Q3LI67	103 aa		6.16	□□□□□ -1.42
RAB6A-208	ENST00000541795	SPRR5	A0A1B0GTR4	108 aa		6.15	□□□□□ -1.42
RAB6A-208	ENST00000541795	MT1G	P13640	62 aa		6.11	□□□□□ -1.43
RAB6A-208	ENST00000541795	LUZP6	Q538Z0	58 aa		6.11	□□□□□ -1.43
RAB6A-208	ENST00000541795	LCE5A	Q5TCM9	118 aa		6.07	□□□□□ -1.44
RAB6A-208	ENST00000541795	MT1M	Q8N339	61 aa		6.06	□□□□□ -1.44
RAB6A-208	ENST00000541795	LCE1A	Q5T7P2	110 aa		6.05	□□□□□ -1.44
RAB6A-208	ENST00000541795	KRTAP5-3	Q6L8H2	238 aa		6.05	□□□□□ -1.44
RAB6A-208	ENST00000541795	MDN1	Q9NU22	5596 aa		6.04	□□□□□ -1.44
RAB6A-208	ENST00000541795	SPRR2E	P22531	72 aa		6.02	□□□□□ -1.45
RAB6A-208	ENST00000541795	SPRR2B	P35325	72 aa		6.02	□□□□□ -1.45
RAB6A-208	ENST00000541795	SPRR2A	P35326	72 aa		6.02	□□□□□ -1.45
RAB6A-208	ENST00000541795	KRTAP9-7	A8MTY7	169 aa		5.98	□□□□□ -1.45
RAB6A-208	ENST00000541795		A0A0A0MQY5	61 aa		5.94	□□□□□ -1.46
RAB6A-208	ENST00000541795	KRTAP4-3	Q9BYR4	195 aa		5.94	□□□□□ -1.46
RAB6A-208	ENST00000541795	KRTAP9-6	A8MVA2	160 aa		5.86	□□□□□ -1.47
RAB6A-208	ENST00000541795	KRTAP4-11	Q9BYQ6	195 aa		5.85	□□□□□ -1.47
RAB6A-208	ENST00000541795	SPRR2D	P22532	72 aa		5.81	□□□□□ -1.48
RAB6A-208	ENST00000541795	NEB	P20929	6669 aa		5.71	□□□□□ -1.5
RAB6A-208	ENST00000541795	DST	Q03001	7570 aa	Known RBP	5.69	□□□□□ -1.5
RAB6A-208	ENST00000541795	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.46	□□□□□ -1.54
RAB6A-208	ENST00000541795	INE1	O15225	51 aa		5.42	□□□□□ -1.54
RAB6A-208	ENST00000541795	KRTAP2-3	P0C7H8	128 aa		5.39	□□□□□ -1.55
RAB6A-208	ENST00000541795	KRTAP2-4	Q9BYR9	128 aa		5.39	□□□□□ -1.55
RAB6A-208	ENST00000541795	KRTAP2-1	Q9BYU5	128 aa		5.38	□□□□□ -1.55
RAB6A-208	ENST00000541795	MT1A	P04731	61 aa		5.34	□□□□□ -1.55
RAB6A-208	ENST00000541795	KRTAP20-1	Q3LI63	56 aa		5.31	□□□□□ -1.56
RAB6A-208	ENST00000541795	KRTAP6-1	Q3LI64	71 aa		5.3	□□□□□ -1.56
RAB6A-208	ENST00000541795	KRTAP2-2	Q9BYT5	123 aa		5.27	□□□□□ -1.57
RAB6A-208	ENST00000541795	KRTAP5-4	Q6L8H1	288 aa		5.22	□□□□□ -1.57
RAB6A-208	ENST00000541795	LCE4A	Q5TA78	99 aa		5.18	□□□□□ -1.58
RAB6A-208	ENST00000541795	SYNE1	Q8NF91	8797 aa	Known RBP	5.14	□□□□□ -1.59
RAB6A-208	ENST00000541795	KRTAP12-4	P60329	112 aa		5.08	□□□□□ -1.6
RAB6A-208	ENST00000541795	MT4	P47944	62 aa		5.04	□□□□□ -1.6
RAB6A-208	ENST00000541795	KRTAP20-2	Q3LI61	65 aa		4.89	□□□□□ -1.63
RAB6A-208	ENST00000541795	KRTAP6-2	Q3LI66	62 aa		4.89	□□□□□ -1.63
RAB6A-208	ENST00000541795	HMCN1	Q96RW7	5635 aa		4.88	□□□□□ -1.63
RAB6A-208	ENST00000541795	MT3	P25713	68 aa		4.84	□□□□□ -1.63
RAB6A-208	ENST00000541795	KRTAP5-2	Q701N4	177 aa		4.73	□□□□□ -1.65
RAB6A-208	ENST00000541795	LCE3D	Q9BYE3	92 aa		4.65	□□□□□ -1.67
RAB6A-208	ENST00000541795	LCE3E	Q5T5B0	92 aa		4.51	□□□□□ -1.69
RAB6A-208	ENST00000541795	OBSCN	Q5VST9	7968 aa		4.4	□□□□□ -1.71
RAB6A-208	ENST00000541795	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.39	□□□□□ -1.71
RAB6A-208	ENST00000541795	GPR98	Q8WXG9	6306 aa		4.34	□□□□□ -1.71
RAB6A-208	ENST00000541795	AHNAK2	Q8IVF2	5795 aa		4.34	□□□□□ -1.72
RAB6A-208	ENST00000541795	LCE1E	Q5T753	118 aa		4.2	□□□□□ -1.74
RAB6A-208	ENST00000541795	KRTAP5-10	Q6L8G5	202 aa		4.11	□□□□□ -1.75
RAB6A-208	ENST00000541795	KRTAP5-1	Q6L8H4	278 aa		4.09	□□□□□ -1.75
RAB6A-208	ENST00000541795	KRTAP5-8	O75690	187 aa		4.08	□□□□□ -1.76
RAB6A-208	ENST00000541795	LCE1B	Q5T7P3	118 aa		3.97	□□□□□ -1.77
RAB6A-208	ENST00000541795	KRTAP5-7	Q6L8G8	165 aa		3.94	□□□□□ -1.78
RAB6A-208	ENST00000541795	PRM1	P04553	51 aa		3.93	□□□□□ -1.78
RAB6A-208	ENST00000541795	LCE1C	Q5T751	118 aa		3.92	□□□□□ -1.78
RAB6A-208	ENST00000541795	MUC5AC	P98088	5654 aa		3.91	□□□□□ -1.78
RAB6A-208	ENST00000541795	KRTAP5-11	Q6L8G4	156 aa		3.89	□□□□□ -1.79
RAB6A-208	ENST00000541795	KRTAP4-4	Q9BYR3	166 aa		3.61	□□□□□ -1.83
RAB6A-208	ENST00000541795	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.52	□□□□□ -1.85
RAB6A-208	ENST00000541795	KRTAP21-2	Q3LI59	83 aa		3.47	□□□□□ -1.85
RAB6A-208	ENST00000541795	AHNAK	Q09666	5890 aa	Known RBP	3.44	□□□□□ -1.86
RAB6A-208	ENST00000541795	LCE1F	Q5T754	118 aa		3.12	□□□□□ -1.91
RAB6A-208	ENST00000541795	PHGR1	C9JFL3	82 aa		2.98	□□□□□ -1.93
RAB6A-208	ENST00000541795	MUC19	Q7Z5P9	8384 aa		2.62	□□□□□ -1.99
RAB6A-208	ENST00000541795	KRTAP21-1	Q3LI58	79 aa		2.48	□□□□□ -2.01
RAB6A-208	ENST00000541795	MUC16	Q8WXI7	14507 aa		1.95	□□□□□ -2.1

Retrieved 78 of 20,778 RNA–protein pairs in 196 ms