RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
SUDS3-203ENST00000541591 C10orf95Q9H7T3 257 aa4.96□□□□□ -1.62
SUDS3-203ENST00000541591 HMCN1Q96RW7 5635 aa4.89□□□□□ -1.63
SUDS3-203ENST00000541591 TNP1P09430 55 aa4.88□□□□□ -1.63
SUDS3-203ENST00000541591 ANAPC13Q9BS18 74 aa4.88□□□□□ -1.63
SUDS3-203ENST00000541591 LCE4AQ5TA78 99 aa4.87□□□□□ -1.63
SUDS3-203ENST00000541591 CCDC179H3BU77 68 aa4.86□□□□□ -1.63
SUDS3-203ENST00000541591 AHNAK2Q8IVF2 5795 aa4.82□□□□□ -1.64
SUDS3-203ENST00000541591 KRTAP4-2Q9BYR5 136 aa4.81□□□□□ -1.64
SUDS3-203ENST00000541591 KRTAP5-4Q6L8H1 288 aa4.78□□□□□ -1.64
SUDS3-203ENST00000541591 PRR15LQ9BU68 103 aa4.76□□□□□ -1.65
SUDS3-203ENST00000541591 KRTAP12-3P60328 96 aa4.73□□□□□ -1.65
SUDS3-203ENST00000541591 LINC01558Q9Y6Z2 57 aa4.71□□□□□ -1.66
SUDS3-203ENST00000541591 ATP5EP56381 51 aaPredicted RBP4.69□□□□□ -1.66
SUDS3-203ENST00000541591 KRTAP5-10Q6L8G5 202 aa4.66□□□□□ -1.66
SUDS3-203ENST00000541591 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
SUDS3-203ENST00000541591 UQCR11O14957 56 aa4.61□□□□□ -1.67
SUDS3-203ENST00000541591 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
SUDS3-203ENST00000541591 KRTAP5-5Q701N2 237 aaPredicted RBP4.56□□□□□ -1.68
SUDS3-203ENST00000541591 TMEM258P61165 79 aa4.55□□□□□ -1.68
SUDS3-203ENST00000541591 MIR22HGQ0VDD5 57 aa4.54□□□□□ -1.68
SUDS3-203ENST00000541591 KRTAP5-3Q6L8H2 238 aa4.54□□□□□ -1.68
SUDS3-203ENST00000541591 KRTAP25-1Q3LHN0 102 aa4.51□□□□□ -1.69
SUDS3-203ENST00000541591 SYNE1Q8NF91 8797 aaKnown RBP4.48□□□□□ -1.69
SUDS3-203ENST00000541591 KRTAP5-7Q6L8G8 165 aa4.46□□□□□ -1.7
SUDS3-203ENST00000541591 PSPHP1O15172 72 aa4.45□□□□□ -1.7
SUDS3-203ENST00000541591 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
SUDS3-203ENST00000541591 KRTAP12-4P60329 112 aa4.44□□□□□ -1.7
SUDS3-203ENST00000541591 K7ERS5 55 aa4.41□□□□□ -1.7
SUDS3-203ENST00000541591 SVIPQ8NHG7 77 aa4.37□□□□□ -1.71
SUDS3-203ENST00000541591 KRTAP15-1Q3LI76 137 aa4.36□□□□□ -1.71
SUDS3-203ENST00000541591 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
SUDS3-203ENST00000541591 KRTAP19-4Q3LI73 84 aa4.3□□□□□ -1.72
SUDS3-203ENST00000541591 Q1T7F1 81 aa4.28□□□□□ -1.72
SUDS3-203ENST00000541591 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
SUDS3-203ENST00000541591 V9GYY9 64 aa4.27□□□□□ -1.73
SUDS3-203ENST00000541591 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
SUDS3-203ENST00000541591 A6NED7 52 aa4.25□□□□□ -1.73
SUDS3-203ENST00000541591 H3BS24 57 aa4.25□□□□□ -1.73
SUDS3-203ENST00000541591 MT1AP04731 61 aa4.22□□□□□ -1.73
SUDS3-203ENST00000541591 CDC42SE1Q9NRR8 79 aa4.2□□□□□ -1.74
SUDS3-203ENST00000541591 KRTAP9-6A8MVA2 160 aa4.17□□□□□ -1.74
SUDS3-203ENST00000541591 KRTAP5-2Q701N4 177 aa4.17□□□□□ -1.74
SUDS3-203ENST00000541591 ROMO1P60602 79 aa4.14□□□□□ -1.75
SUDS3-203ENST00000541591 RPS28P62857 69 aaKnown RBP4.1□□□□□ -1.75
SUDS3-203ENST00000541591 KRTAP6-2Q3LI66 62 aa4.08□□□□□ -1.76
SUDS3-203ENST00000541591 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
SUDS3-203ENST00000541591 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
SUDS3-203ENST00000541591 AHNAKQ09666 5890 aaKnown RBP3.94□□□□□ -1.78
SUDS3-203ENST00000541591 MUC5BQ9HC84 5762 aaPredicted RBP3.92□□□□□ -1.78
SUDS3-203ENST00000541591 MUC5ACP98088 5654 aa3.9□□□□□ -1.79
SUDS3-203ENST00000541591 MT3P25713 68 aa3.83□□□□□ -1.8
SUDS3-203ENST00000541591 PCP4P48539 62 aa3.78□□□□□ -1.8
SUDS3-203ENST00000541591 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
SUDS3-203ENST00000541591 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
SUDS3-203ENST00000541591 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
SUDS3-203ENST00000541591 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
SUDS3-203ENST00000541591 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
SUDS3-203ENST00000541591 PRAC1Q96KF2 57 aa3.29□□□□□ -1.88
SUDS3-203ENST00000541591 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.28□□□□□ -1.88
SUDS3-203ENST00000541591 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
SUDS3-203ENST00000541591 PMAIP1Q13794 54 aa3.23□□□□□ -1.89
SUDS3-203ENST00000541591 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
SUDS3-203ENST00000541591 LCE3DQ9BYE3 92 aa3.09□□□□□ -1.91
SUDS3-203ENST00000541591 PRO0628Q9UI54 55 aa3.06□□□□□ -1.92
SUDS3-203ENST00000541591 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
SUDS3-203ENST00000541591 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
SUDS3-203ENST00000541591 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
SUDS3-203ENST00000541591 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
SUDS3-203ENST00000541591 KTN1-AS1Q86SY8 53 aa2.75□□□□□ -1.97
SUDS3-203ENST00000541591 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
SUDS3-203ENST00000541591 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
SUDS3-203ENST00000541591 NDUFAF8A1L188 74 aa2.62□□□□□ -1.99
SUDS3-203ENST00000541591 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
SUDS3-203ENST00000541591 PRM1P04553 51 aa2.17□□□□□ -2.06
SUDS3-203ENST00000541591 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
SUDS3-203ENST00000541591 INE1O15225 51 aa1.96□□□□□ -2.1
SUDS3-203ENST00000541591 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 48.1 ms